RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CCDC102AQ96A19 550 aa11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 PLEKHA4Q9H4M7 779 aa11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 KIAA1024Q9UPX6 916 aa11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 NCK2O43639 380 aa11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 LRRC63Q05C16 580 aa11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 MUM1L1Q5H9M0 696 aa11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 CAGE1Q8TC20 777 aa11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 RIN2Q8WYP3 895 aaPredicted RBP11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 RAB34Q9BZG1 259 aa11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 BCCIPQ9P287 314 aaKnown RBP eCLIP11.52□□□□□ -0.57
CLSTN1-203ENST00000435891 TRAF5O00463 557 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 AKR1B10O60218 316 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 MARCH6O60337 910 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 TLR2O60603 784 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 NOL4O94818 638 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 TUBB4BP68371 445 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 HGSNATQ68CP4 663 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 NFRKBQ6P4R8 1299 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 PACS2Q86VP3 889 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 MYOCDQ8IZQ8 938 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 EHBP1Q8NDI1 1231 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 CXorf56Q9H5V9 222 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 PANK4Q9NVE7 773 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 KLRG2A4D1S0 409 aaPredicted RBP11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 QRICH1Q2TAL8 776 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 FAM26FQ5R3K3 315 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 SP8Q8IXZ3 490 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 MTMR8Q96EF0 704 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 ZC3H12CQ9C0D7 883 aaKnown RBP11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 COA1Q9GZY4 146 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 BCAS3Q9H6U6 928 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 POLD4Q9HCU8 107 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 SNX12Q9UMY4 172 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 ATF5Q9Y2D1 282 aaPredicted RBP11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 SLC1A4P43007 532 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 ASTE1Q2TB18 679 aaPredicted RBP11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 ATP6V0A2Q9Y487 856 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 PCDHA2Q9Y5H9 948 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 ARFGEF1Q9Y6D6 1849 aa11.51□□□□□ -0.57
CLSTN1-203ENST00000435891 SRCAPQ6ZRS2 3230 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 ANO9A1A5B4 782 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 BUB1O43683 1085 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 RASSF7Q02833 373 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 PDXDC1Q6P996 788 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 EXOC4Q96A65 974 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 DMGDHQ9UI17 866 aaKnown RBP11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 MYH4Q9Y623 1939 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 DDTLA6NHG4 134 aaPredicted RBP11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 MED24O75448 989 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 LCA5LO95447 670 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 MRPL12P52815 198 aaKnown RBP11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 CCDC84Q86UT8 332 aaPredicted RBP11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 GBP3Q9H0R5 595 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 DBNDD1Q9H9R9 158 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 SYF2O95926 243 aaKnown RBP11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 EEF2P13639 858 aaKnown RBP11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 MATR3P43243 847 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 CASP5P51878 434 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 PSMC6P62333 389 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 POTEGQ6S5H5 508 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 POTEEQ6S8J3 1075 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 SCFD1Q8WVM8 642 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 PCDHA1Q9Y5I3 950 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 COL4A3BPQ9Y5P4 624 aa11.5□□□□□ -0.57
CLSTN1-203ENST00000435891 IVLP07476 585 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 PLA2G4BP0C869 781 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 ACTN2P35609 894 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 MAGEA1P43355 309 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 FKBP3Q00688 224 aaKnown RBP11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 ENOX2Q16206 610 aaKnown RBP11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 ARSHQ5FYA8 562 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 GPATCH4Q5T3I0 446 aaKnown RBP11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 PPP1R18Q6NYC8 613 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 CACNA2D4Q7Z3S7 1137 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 SIAH1Q8IUQ4 282 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 PROM2Q8N271 834 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 TRIM58Q8NG06 486 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 LRRC1Q9BTT6 524 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 SWAP70Q9UH65 585 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 SUFUQ9UMX1 484 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 MEIS1O00470 390 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 EIF3JO75822 258 aaKnown RBP11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 CYP11B2P19099 503 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 SLC7A5Q01650 507 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 PSMD2Q13200 908 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 CCDC40Q4G0X9 1142 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 HERC4Q5GLZ8 1057 aaPredicted RBP11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 GPBP1Q86WP2 473 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 KIAA0825Q8IV33 1275 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 MSL3Q8N5Y2 521 aaKnown RBP11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 PPM1EQ8WY54 764 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 HPCAL4Q9UM19 191 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 LRRC37AA6NMS7 1700 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 MEIS2O14770 477 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 USO1O60763 962 aaKnown RBP11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 TRIM37O94972 964 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms