RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 IGLV3-22A0A075B6J6 115 aa20.94■□□□□ 0.94
HLA-F-220ENST00000434407 PPFIA4O75335 1185 aa20.94■□□□□ 0.94
HLA-F-220ENST00000434407 MCM2P49736 904 aa20.94■□□□□ 0.94
HLA-F-220ENST00000434407 ITGA7Q13683 1181 aa20.94■□□□□ 0.94
HLA-F-220ENST00000434407 CYFIP1Q7L576 1253 aa20.94■□□□□ 0.94
HLA-F-220ENST00000434407 KAT2BQ92831 832 aa20.94■□□□□ 0.94
HLA-F-220ENST00000434407 VTI1AQ96AJ9 217 aa20.94■□□□□ 0.94
HLA-F-220ENST00000434407 MLXIPQ9HAP2 919 aa20.94■□□□□ 0.94
HLA-F-220ENST00000434407 MROH7Q68CQ1 1323 aa20.94■□□□□ 0.94
HLA-F-220ENST00000434407 FAM86B1E9PN63 330 aa20.93■□□□□ 0.94
HLA-F-220ENST00000434407 FAM86B2P0C5J1 330 aa20.93■□□□□ 0.94
HLA-F-220ENST00000434407 USP11P51784 963 aa20.93■□□□□ 0.94
HLA-F-220ENST00000434407 ARP10275 920 aa20.92■□□□□ 0.94
HLA-F-220ENST00000434407 PSMC6P62333 389 aa20.92■□□□□ 0.94
HLA-F-220ENST00000434407 HMGN5P82970 282 aaKnown RBP20.92■□□□□ 0.94
HLA-F-220ENST00000434407 FAM126BQ8IXS8 530 aa20.92■□□□□ 0.94
HLA-F-220ENST00000434407 TMX3Q96JJ7 454 aa20.92■□□□□ 0.94
HLA-F-220ENST00000434407 GPR20Q99678 358 aa20.92■□□□□ 0.94
HLA-F-220ENST00000434407 PDLIM7Q9NR12 457 aa20.92■□□□□ 0.94
HLA-F-220ENST00000434407 NFASCO94856 1347 aa20.92■□□□□ 0.94
HLA-F-220ENST00000434407 LTBP2Q14767 1821 aa20.92■□□□□ 0.94
HLA-F-220ENST00000434407 TRIP12Q14669 1992 aaPredicted RBP20.92■□□□□ 0.94
HLA-F-220ENST00000434407 HAS3O00219 553 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 SORBS3O60504 671 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 PQBP1O60828 265 aaKnown RBP20.91■□□□□ 0.94
HLA-F-220ENST00000434407 F2P00734 622 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 CD4P01730 458 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 FAAP100Q0VG06 881 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 NBPF20Q3BBV1 942 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 NFRKBQ6P4R8 1299 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 KRT25Q7Z3Z0 450 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 OXER1Q8TDS5 423 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 TBCKQ8TEA7 893 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 KAT6AQ92794 2004 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 LENG9Q96B70 501 aa20.91■□□□□ 0.94
HLA-F-220ENST00000434407 AGO4Q9HCK5 861 aaKnown RBP20.91■□□□□ 0.94
HLA-F-220ENST00000434407 ZMYND8Q9ULU4 1186 aaPredicted RBP20.91■□□□□ 0.94
HLA-F-220ENST00000434407 TRIOBPQ9H2D6 2365 aa20.9■□□□□ 0.94
HLA-F-220ENST00000434407 WDR81Q562E7 1941 aa20.9■□□□□ 0.94
HLA-F-220ENST00000434407 DCDC2CA8MYV0 355 aa20.9■□□□□ 0.94
HLA-F-220ENST00000434407 CLTBP09497 229 aa20.9■□□□□ 0.94
HLA-F-220ENST00000434407 ZNF76P36508 570 aa20.9■□□□□ 0.94
HLA-F-220ENST00000434407 PLA2G4DQ86XP0 818 aa20.9■□□□□ 0.94
HLA-F-220ENST00000434407 TNFRSF25Q93038 417 aa20.9■□□□□ 0.94
HLA-F-220ENST00000434407 C16orf70Q9BSU1 422 aa20.9■□□□□ 0.94
HLA-F-220ENST00000434407 TELO2Q9Y4R8 837 aa20.9■□□□□ 0.94
HLA-F-220ENST00000434407 CYP3A7-CYP3A51PA0A087WV96 503 aa20.89■□□□□ 0.93
HLA-F-220ENST00000434407 TRIM43BA6NCK2 446 aa20.89■□□□□ 0.93
HLA-F-220ENST00000434407 KIAA0355O15063 1070 aa20.89■□□□□ 0.93
HLA-F-220ENST00000434407 MMP1P03956 469 aa20.89■□□□□ 0.93
HLA-F-220ENST00000434407 CYP3A7P24462 503 aa20.89■□□□□ 0.93
HLA-F-220ENST00000434407 SETQ01105 290 aaPredicted RBP20.89■□□□□ 0.93
HLA-F-220ENST00000434407 PTPN11Q06124 597 aaPredicted RBP20.89■□□□□ 0.93
HLA-F-220ENST00000434407 ITGB3BPQ13352 177 aaPredicted RBP20.89■□□□□ 0.93
HLA-F-220ENST00000434407 NONOQ15233 471 aaKnown RBP eCLIP20.89■□□□□ 0.93
HLA-F-220ENST00000434407 KRT40Q6A162 431 aa20.89■□□□□ 0.93
HLA-F-220ENST00000434407 MOXD1Q6UVY6 613 aa20.89■□□□□ 0.93
HLA-F-220ENST00000434407 SH3RF1Q7Z6J0 888 aa20.89■□□□□ 0.93
HLA-F-220ENST00000434407 SESTD1Q86VW0 696 aa20.89■□□□□ 0.93
HLA-F-220ENST00000434407 TRIM43Q96BQ3 446 aaPredicted RBP20.89■□□□□ 0.93
HLA-F-220ENST00000434407 MBOAT7Q96N66 472 aa20.89■□□□□ 0.93
HLA-F-220ENST00000434407 TBX21Q9UL17 535 aa20.89■□□□□ 0.93
HLA-F-220ENST00000434407 NOP56O00567 594 aaKnown RBP20.88■□□□□ 0.93
HLA-F-220ENST00000434407 DHX15O43143 795 aaKnown RBP20.88■□□□□ 0.93
HLA-F-220ENST00000434407 LGALS2P05162 132 aa20.88■□□□□ 0.93
HLA-F-220ENST00000434407 ZNF286BP0CG31 522 aa20.88■□□□□ 0.93
HLA-F-220ENST00000434407 SYN1P17600 705 aa20.88■□□□□ 0.93
HLA-F-220ENST00000434407 KATNAL1Q9BW62 490 aa20.88■□□□□ 0.93
HLA-F-220ENST00000434407 PRO3102Q9H379 93 aa20.88■□□□□ 0.93
HLA-F-220ENST00000434407 GSTTP1A0A1W2PQM5 241 aa20.87■□□□□ 0.93
HLA-F-220ENST00000434407 KRT2P35908 639 aa20.87■□□□□ 0.93
HLA-F-220ENST00000434407 PSEN2P49810 448 aa20.87■□□□□ 0.93
HLA-F-220ENST00000434407 NR5A1Q13285 461 aa20.87■□□□□ 0.93
HLA-F-220ENST00000434407 Q4G0T1 1027 aa20.87■□□□□ 0.93
HLA-F-220ENST00000434407 PRR16Q569H4 304 aa20.87■□□□□ 0.93
HLA-F-220ENST00000434407 SEPT1Q8WYJ6 367 aa20.87■□□□□ 0.93
HLA-F-220ENST00000434407 GDF15Q99988 308 aa20.87■□□□□ 0.93
HLA-F-220ENST00000434407 JPH1Q9HDC5 661 aaPredicted RBP20.87■□□□□ 0.93
HLA-F-220ENST00000434407 PKD2L1Q9P0L9 805 aa20.87■□□□□ 0.93
HLA-F-220ENST00000434407 SLC9A2Q9UBY0 812 aa20.87■□□□□ 0.93
HLA-F-220ENST00000434407 MYH9P35579 1960 aaKnown RBP20.86■□□□□ 0.93
HLA-F-220ENST00000434407 CCDC194A0A1B0GVG4 234 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 IPO5O00410 1097 aaKnown RBP20.86■□□□□ 0.93
HLA-F-220ENST00000434407 TLR3O15455 904 aaKnown RBP20.86■□□□□ 0.93
HLA-F-220ENST00000434407 B4GALT4O60513 344 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 TRIM29Q14134 588 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 MFSD10Q14728 455 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 INF2Q27J81 1249 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 EARS2Q5JPH6 523 aaKnown RBP20.86■□□□□ 0.93
HLA-F-220ENST00000434407 FBXO18Q8NFZ0 1043 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 C8orf76Q96K31 380 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 SDF4Q9BRK5 362 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 TRPV6Q9H1D0 765 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 BRMS1Q9HCU9 246 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 TMEM39AQ9NV64 488 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 PRKAG2Q9UGJ0 569 aa20.86■□□□□ 0.93
HLA-F-220ENST00000434407 BTBD18B2RXH4 712 aa20.85■□□□□ 0.93
HLA-F-220ENST00000434407 H3BRB1 525 aa20.85■□□□□ 0.93
HLA-F-220ENST00000434407 ATG7O95352 703 aa20.85■□□□□ 0.93
HLA-F-220ENST00000434407 ITGB8P26012 769 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms