RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 ZNF397Q8NF99 534 aaPredicted RBP8.36□□□□□ -1.07
COL17A1-204ENST00000433822 TMEM47Q9BQJ4 181 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 MRIQ9BWK5 157 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 CFHR5Q9BXR6 569 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 RIOX1Q9H6W3 641 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 C6orf50Q9HD87 102 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 TIMMDC1Q9NPL8 285 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 KBTBD4Q9NVX7 518 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 MKL2Q9ULH7 1088 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 PCDHB9Q9Y5E1 797 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 SBF1O95248 1867 aa8.36□□□□□ -1.07
COL17A1-204ENST00000433822 FLT1P17948 1338 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 IGKV6D-41A0A0C4DH26 115 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 A0A1W2PQC6 194 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 ZBBXA8MT70 800 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 KLRF2D3W0D1 207 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 CYTH3O43739 400 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 NMT2O60551 498 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 MFAP3LO75121 409 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 UFL1O94874 794 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 RPN1P04843 607 aaKnown RBP8.35□□□□□ -1.07
COL17A1-204ENST00000433822 PARP1P09874 1014 aaKnown RBP8.35□□□□□ -1.07
COL17A1-204ENST00000433822 PRKCSHP14314 528 aaPredicted RBP8.35□□□□□ -1.07
COL17A1-204ENST00000433822 EEF1GP26641 437 aaKnown RBP8.35□□□□□ -1.07
COL17A1-204ENST00000433822 BTDP43251 543 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 CDK8P49336 464 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 SNRPNP63162 240 aaKnown RBP8.35□□□□□ -1.07
COL17A1-204ENST00000433822 GPSM2P81274 684 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 GABPAQ06546 454 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 STIM1Q13586 685 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 NONOQ15233 471 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL17A1-204ENST00000433822 ZNF174Q15697 407 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 WWC2Q6AWC2 1192 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 MCTP2Q6DN12 878 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 ZNF662Q6ZS27 426 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 CYP2U1Q7Z449 544 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 AMIGO3Q86WK7 504 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 PDILTQ8N807 584 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 RETREG2Q8NC44 543 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 TGFBRAP1Q8WUH2 860 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 CCDC47Q96A33 483 aaKnown RBP8.35□□□□□ -1.07
COL17A1-204ENST00000433822 RRP36Q96EU6 259 aaKnown RBP8.35□□□□□ -1.07
COL17A1-204ENST00000433822 EYA3Q99504 573 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 NAP1L4Q99733 375 aaKnown RBP8.35□□□□□ -1.07
COL17A1-204ENST00000433822 GLT8D2Q9H1C3 349 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 EHD4Q9H223 541 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 THAP9Q9H5L6 903 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 TRMT1Q9NXH9 659 aaKnown RBP8.35□□□□□ -1.07
COL17A1-204ENST00000433822 MYO1AQ9UBC5 1043 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 PCDHA6Q9UN73 950 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 PPP2R2CQ9Y2T4 447 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 PCDHA8Q9Y5H6 950 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 MYH8P13535 1937 aa8.35□□□□□ -1.07
COL17A1-204ENST00000433822 ABCB11O95342 1321 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 BICDL2A1A5D9 508 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 KRBA1A5PL33 1030 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 EFCAB8A8MWE9 144 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 TMEM232C9JQI7 657 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 POLRMTO00411 1230 aaKnown RBP8.34□□□□□ -1.07
COL17A1-204ENST00000433822 ATP8B1O43520 1251 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 CCDC175P0C221 793 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 OR52Z1P0C646 297 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 MCM7P33993 719 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 STAT6P42226 847 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 HDLBPQ00341 1268 aaKnown RBP8.34□□□□□ -1.07
COL17A1-204ENST00000433822 AMPD3Q01432 767 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 IL17AQ16552 155 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 SLC35G1Q2M3R5 365 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 ISM2Q6H9L7 571 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 HHIPL2Q6UWX4 724 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 ARHGAP27Q6ZUM4 889 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 RASGRP2Q7LDG7 609 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 TAS1R3Q7RTX0 852 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 NEK8Q86SG6 692 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 PPFIBP1Q86W92 1011 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 TMTC1Q8IUR5 882 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 TEX11Q8IYF3 940 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 ADSSL1Q8N142 457 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 STAG2Q8N3U4 1231 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 TBC1D16Q8TBP0 767 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 DHTKD1Q96HY7 919 aaPredicted RBP8.34□□□□□ -1.07
COL17A1-204ENST00000433822 CCDC17Q96LX7 622 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 LRRC27Q9C0I9 530 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 SAMSN1Q9NSI8 373 aaKnown RBP8.34□□□□□ -1.07
COL17A1-204ENST00000433822 FAM53CQ9NYF3 392 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 OGFRQ9NZT2 677 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 SEC63Q9UGP8 760 aaKnown RBP8.34□□□□□ -1.07
COL17A1-204ENST00000433822 ZNF215Q9UL58 517 aaPredicted RBP8.34□□□□□ -1.07
COL17A1-204ENST00000433822 TTF2Q9UNY4 1162 aaKnown RBP8.34□□□□□ -1.07
COL17A1-204ENST00000433822 ATP6V0A2Q9Y487 856 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 ANKRD31Q8N7Z5 1873 aa8.34□□□□□ -1.07
COL17A1-204ENST00000433822 BAZ2BQ9UIF8 2168 aaKnown RBP8.34□□□□□ -1.08
COL17A1-204ENST00000433822 COL2A1P02458 1487 aaPredicted RBP8.33□□□□□ -1.08
COL17A1-204ENST00000433822 PSMA7O14818 248 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 H2AFXP16104 143 aaPredicted RBP8.33□□□□□ -1.08
COL17A1-204ENST00000433822 GCFC2P16383 781 aaKnown RBP8.33□□□□□ -1.08
COL17A1-204ENST00000433822 ATP2B1P20020 1258 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 UBA7P41226 1012 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 AFMP43652 599 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 PDIA5Q14554 519 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms