RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 EDIL3O43854 480 aa16.7■□□□□ 0.26
TNFAIP3-204ENST00000433680 ATP9AO75110 1047 aa16.7■□□□□ 0.26
TNFAIP3-204ENST00000433680 CABYRO75952 493 aa16.7■□□□□ 0.26
TNFAIP3-204ENST00000433680 ASGR1P07306 291 aa16.7■□□□□ 0.26
TNFAIP3-204ENST00000433680 ARP10275 920 aa16.7■□□□□ 0.26
TNFAIP3-204ENST00000433680 COL6A1P12109 1028 aa16.7■□□□□ 0.26
TNFAIP3-204ENST00000433680 RGS19P49795 217 aa16.7■□□□□ 0.26
TNFAIP3-204ENST00000433680 EARS2Q5JPH6 523 aaKnown RBP16.7■□□□□ 0.26
TNFAIP3-204ENST00000433680 CYFIP1Q7L576 1253 aa16.7■□□□□ 0.26
TNFAIP3-204ENST00000433680 SPATA33Q96N06 139 aa16.7■□□□□ 0.26
TNFAIP3-204ENST00000433680 TBC1D22BQ9NU19 505 aa16.7■□□□□ 0.26
TNFAIP3-204ENST00000433680 IPO5O00410 1097 aaKnown RBP16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 NOP56O00567 594 aaKnown RBP16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 CCNT1O60563 726 aaKnown RBP16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 PPFIA4O75335 1185 aa16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 TRAPPC10P48553 1259 aa16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 BEX3Q00994 111 aa16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 ORC2Q13416 577 aaPredicted RBP16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 DGKDQ16760 1214 aa16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 MCTP1Q6DN14 999 aa16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 AFG1LQ8WV93 481 aa16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 LENG9Q96B70 501 aa16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 GLT1D1Q96MS3 346 aa16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 ZNF577Q9BSK1 485 aa16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 DDX25Q9UHL0 483 aaKnown RBP16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 NOL7Q9UMY1 257 aaKnown RBP16.69■□□□□ 0.26
TNFAIP3-204ENST00000433680 CAPN15O75808 1086 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 TDP2O95551 362 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 MMP3P08254 477 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 HOXD8P13378 290 aaPredicted RBP16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 SYT1P21579 422 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 PTGS1P23219 599 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 IRX5P78411 483 aaPredicted RBP16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 HSDL1Q3SXM5 330 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 DIS3LQ8TF46 1054 aaKnown RBP16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 RIT2Q99578 217 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 SEZ6LQ9BYH1 1024 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 SENP6Q9GZR1 1112 aaPredicted RBP16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 JPH1Q9HDC5 661 aaPredicted RBP16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 FOXD4L1Q9NU39 408 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 SLC9A2Q9UBY0 812 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 TCEAL9Q9UHQ7 104 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 ELP1O95163 1332 aa16.68■□□□□ 0.26
TNFAIP3-204ENST00000433680 DOCK5Q9H7D0 1870 aa16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 A0A1W2PQ45 241 aaPredicted RBP16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 A0A1W2PQY0 241 aa16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 FAM205CA6NFA0 338 aa16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 KIF28PB7ZC32 967 aa16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 TBX3O15119 743 aa16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 MSH4O15457 936 aa16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 PURAQ00577 322 aaKnown RBP16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 ITGB3BPQ13352 177 aaPredicted RBP16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 FAM20AQ96MK3 541 aa16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 GPR20Q99678 358 aa16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 MTG1Q9BT17 334 aaPredicted RBP16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 HTATIP2Q9BUP3 242 aa16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 PKD2L1Q9P0L9 805 aa16.67■□□□□ 0.26
TNFAIP3-204ENST00000433680 VPS37CA5D8V6 355 aaPredicted RBP16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 DHX15O43143 795 aaKnown RBP16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 BAG4O95429 457 aaKnown RBP16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 MYL3P08590 195 aa16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 RILPL1Q5EBL4 403 aa16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 C1orf53Q5VUE5 145 aa16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 CXCL17Q6UXB2 119 aa16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 BRAPQ7Z569 592 aa16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 SEPT1Q8WYJ6 367 aa16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 SLC5A5Q92911 643 aa16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 FERMT2Q96AC1 680 aa16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 BCAS3Q9H6U6 928 aa16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 STARD7Q9NQZ5 370 aa16.66■□□□□ 0.26
TNFAIP3-204ENST00000433680 STX6O43752 255 aa16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 SLC37A4O43826 429 aa16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 SORBS3O60504 671 aa16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 KRT76Q01546 638 aa16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 ZNF746Q6NUN9 644 aaPredicted RBP16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 SLC39A5Q6ZMH5 540 aa16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 SMAP1Q8IYB5 467 aaPredicted RBP16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 ETNPPLQ8TBG4 499 aa16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 KATNAL1Q9BW62 490 aa16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 TEKT3Q9BXF9 490 aa16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 KCNMB3Q9NPA1 279 aa16.65■□□□□ 0.26
TNFAIP3-204ENST00000433680 A0A0U1RQG5 324 aaPredicted RBP16.64■□□□□ 0.25
TNFAIP3-204ENST00000433680 MARCH6O60337 910 aa16.64■□□□□ 0.25
TNFAIP3-204ENST00000433680 NEMFO60524 1076 aa16.64■□□□□ 0.25
TNFAIP3-204ENST00000433680 GAS7O60861 476 aa16.64■□□□□ 0.25
TNFAIP3-204ENST00000433680 TCF7P36402 384 aaPredicted RBP16.64■□□□□ 0.25
TNFAIP3-204ENST00000433680 TTC38Q5R3I4 469 aa16.64■□□□□ 0.25
TNFAIP3-204ENST00000433680 LRCH2Q5VUJ6 765 aa16.64■□□□□ 0.25
TNFAIP3-204ENST00000433680 VTI1AQ96AJ9 217 aa16.64■□□□□ 0.25
TNFAIP3-204ENST00000433680 ZSCAN16Q9H4T2 348 aaPredicted RBP16.64■□□□□ 0.25
TNFAIP3-204ENST00000433680 GSTTP1A0A1W2PQM5 241 aa16.63■□□□□ 0.25
TNFAIP3-204ENST00000433680 PSMD10O75832 226 aa16.63■□□□□ 0.25
TNFAIP3-204ENST00000433680 ATG7O95352 703 aa16.63■□□□□ 0.25
TNFAIP3-204ENST00000433680 F2P00734 622 aa16.63■□□□□ 0.25
TNFAIP3-204ENST00000433680 SFNP31947 248 aa16.63■□□□□ 0.25
TNFAIP3-204ENST00000433680 ACTR2P61160 394 aa16.63■□□□□ 0.25
TNFAIP3-204ENST00000433680 SP4Q02446 784 aa16.63■□□□□ 0.25
TNFAIP3-204ENST00000433680 SNX17Q15036 470 aa16.63■□□□□ 0.25
TNFAIP3-204ENST00000433680 CALCRLQ16602 461 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms