RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 FAM86B1E9PN63 330 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 M0R2N6 131 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 DDX39AO00148 427 aaKnown RBP17.62■□□□□ 0.41
TREX1-201ENST00000433541 CTAGE5O15320 804 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 MARCH6O60337 910 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 FAM86B2P0C5J1 330 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 ARP10275 920 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 USP11P51784 963 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 LRRC26Q2I0M4 334 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 HSDL1Q3SXM5 330 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 FAM47CQ5HY64 1035 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 CCSAPQ6IQ19 270 aaPredicted RBP17.62■□□□□ 0.41
TREX1-201ENST00000433541 METTL7BQ6UX53 244 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 NIPA1Q7RTP0 329 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 SENP7Q9BQF6 1050 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 MTG1Q9BT17 334 aaPredicted RBP17.62■□□□□ 0.41
TREX1-201ENST00000433541 KAT6AQ92794 2004 aa17.62■□□□□ 0.41
TREX1-201ENST00000433541 MEIS1O00470 390 aa17.61■□□□□ 0.41
TREX1-201ENST00000433541 CCNT1O60563 726 aaKnown RBP17.61■□□□□ 0.41
TREX1-201ENST00000433541 PQBP1O60828 265 aaKnown RBP17.61■□□□□ 0.41
TREX1-201ENST00000433541 ATP9AO75110 1047 aa17.61■□□□□ 0.41
TREX1-201ENST00000433541 ZNF286BP0CG31 522 aa17.61■□□□□ 0.41
TREX1-201ENST00000433541 KCNA2P16389 499 aa17.61■□□□□ 0.41
TREX1-201ENST00000433541 RTP1P59025 263 aa17.61■□□□□ 0.41
TREX1-201ENST00000433541 PSMC6P62333 389 aa17.61■□□□□ 0.41
TREX1-201ENST00000433541 NKX3-2P78367 333 aa17.61■□□□□ 0.41
TREX1-201ENST00000433541 PURAQ00577 322 aaKnown RBP17.61■□□□□ 0.41
TREX1-201ENST00000433541 UTP14CQ5TAP6 766 aaKnown RBP17.61■□□□□ 0.41
TREX1-201ENST00000433541 FBXO18Q8NFZ0 1043 aa17.61■□□□□ 0.41
TREX1-201ENST00000433541 EMID1Q96A84 441 aaPredicted RBP17.61■□□□□ 0.41
TREX1-201ENST00000433541 NAP1L4Q99733 375 aaKnown RBP17.61■□□□□ 0.41
TREX1-201ENST00000433541 BCAS3Q9H6U6 928 aa17.61■□□□□ 0.41
TREX1-201ENST00000433541 AGO4Q9HCK5 861 aaKnown RBP17.61■□□□□ 0.41
TREX1-201ENST00000433541 JPH1Q9HDC5 661 aaPredicted RBP17.61■□□□□ 0.41
TREX1-201ENST00000433541 NR2E3Q9Y5X4 410 aa17.61■□□□□ 0.41
TREX1-201ENST00000433541 ELP1O95163 1332 aa17.61■□□□□ 0.41
TREX1-201ENST00000433541 TNRC18O15417 2968 aaPredicted RBP17.61■□□□□ 0.41
TREX1-201ENST00000433541 IPO5O00410 1097 aaKnown RBP17.6■□□□□ 0.41
TREX1-201ENST00000433541 TDP2O95551 362 aa17.6■□□□□ 0.41
TREX1-201ENST00000433541 ATP2B1P20020 1258 aa17.6■□□□□ 0.41
TREX1-201ENST00000433541 ITGA7Q13683 1181 aa17.6■□□□□ 0.41
TREX1-201ENST00000433541 TRIM60Q495X7 471 aa17.6■□□□□ 0.41
TREX1-201ENST00000433541 PRDM5Q9NQX1 630 aaPredicted RBP17.6■□□□□ 0.41
TREX1-201ENST00000433541 SLC9A2Q9UBY0 812 aa17.6■□□□□ 0.41
TREX1-201ENST00000433541 PRKAG2Q9UGJ0 569 aa17.6■□□□□ 0.41
TREX1-201ENST00000433541 DDX25Q9UHL0 483 aaKnown RBP17.6■□□□□ 0.41
TREX1-201ENST00000433541 MYH9P35579 1960 aaKnown RBP17.6■□□□□ 0.41
TREX1-201ENST00000433541 MROH7Q68CQ1 1323 aa17.59■□□□□ 0.41
TREX1-201ENST00000433541 IGLV3-22A0A075B6J6 115 aa17.59■□□□□ 0.41
TREX1-201ENST00000433541 FAM205CA6NFA0 338 aa17.59■□□□□ 0.41
TREX1-201ENST00000433541 TLR3O15455 904 aaKnown RBP17.59■□□□□ 0.41
TREX1-201ENST00000433541 CIITAP33076 1130 aa17.59■□□□□ 0.41
TREX1-201ENST00000433541 CUL4AQ13619 759 aa17.59■□□□□ 0.41
TREX1-201ENST00000433541 LARP1BQ659C4 914 aaKnown RBP17.59■□□□□ 0.41
TREX1-201ENST00000433541 CRYGNQ8WXF5 182 aa17.59■□□□□ 0.41
TREX1-201ENST00000433541 SNX21Q969T3 373 aa17.59■□□□□ 0.41
TREX1-201ENST00000433541 KATNAL1Q9BW62 490 aa17.59■□□□□ 0.41
TREX1-201ENST00000433541 SAMM50Q9Y512 469 aa17.59■□□□□ 0.41
TREX1-201ENST00000433541 SCN10AQ9Y5Y9 1956 aa17.59■□□□□ 0.41
TREX1-201ENST00000433541 NFASCO94856 1347 aa17.58■□□□□ 0.4
TREX1-201ENST00000433541 VPS37CA5D8V6 355 aaPredicted RBP17.58■□□□□ 0.4
TREX1-201ENST00000433541 DCDC2CA8MYV0 355 aa17.58■□□□□ 0.4
TREX1-201ENST00000433541 PPFIA4O75335 1185 aa17.58■□□□□ 0.4
TREX1-201ENST00000433541 GCFC2P16383 781 aaKnown RBP17.58■□□□□ 0.4
TREX1-201ENST00000433541 TCF7P36402 384 aaPredicted RBP17.58■□□□□ 0.4
TREX1-201ENST00000433541 PPP1R13LQ8WUF5 828 aa17.58■□□□□ 0.4
TREX1-201ENST00000433541 SEPT1Q8WYJ6 367 aa17.58■□□□□ 0.4
TREX1-201ENST00000433541 GLG1Q92896 1179 aa17.58■□□□□ 0.4
TREX1-201ENST00000433541 GPR20Q99678 358 aa17.58■□□□□ 0.4
TREX1-201ENST00000433541 FOXP1Q9H334 677 aaPredicted RBP17.58■□□□□ 0.4
TREX1-201ENST00000433541 TBC1D22BQ9NU19 505 aa17.58■□□□□ 0.4
TREX1-201ENST00000433541 ZNF215Q9UL58 517 aaPredicted RBP17.58■□□□□ 0.4
TREX1-201ENST00000433541 NOL7Q9UMY1 257 aaKnown RBP17.58■□□□□ 0.4
TREX1-201ENST00000433541 ARVCFO00192 962 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 GAS7O60861 476 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 LGALS2P05162 132 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 PDCP20941 246 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 ITGB3BPQ13352 177 aaPredicted RBP17.57■□□□□ 0.4
TREX1-201ENST00000433541 MFSD10Q14728 455 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 NBPF20Q3BBV1 942 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 EARS2Q5JPH6 523 aaKnown RBP17.57■□□□□ 0.4
TREX1-201ENST00000433541 LRCH2Q5VUJ6 765 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 MOXD1Q6UVY6 613 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 NOSTRINQ8IVI9 506 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 C7orf31Q8N865 590 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 TEKT3Q9BXF9 490 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 AZI2Q9H6S1 392 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 NOD1Q9Y239 953 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 WDR81Q562E7 1941 aa17.57■□□□□ 0.4
TREX1-201ENST00000433541 BACH1O14867 736 aa17.56■□□□□ 0.4
TREX1-201ENST00000433541 MSH4O15457 936 aa17.56■□□□□ 0.4
TREX1-201ENST00000433541 CHMP2AO43633 222 aa17.56■□□□□ 0.4
TREX1-201ENST00000433541 BAG4O95429 457 aaKnown RBP17.56■□□□□ 0.4
TREX1-201ENST00000433541 SYN1P17600 705 aa17.56■□□□□ 0.4
TREX1-201ENST00000433541 PSEN2P49810 448 aa17.56■□□□□ 0.4
TREX1-201ENST00000433541 ACTR2P61160 394 aa17.56■□□□□ 0.4
TREX1-201ENST00000433541 TLE2Q04725 743 aa17.56■□□□□ 0.4
TREX1-201ENST00000433541 KIAA0753Q2KHM9 967 aa17.56■□□□□ 0.4
TREX1-201ENST00000433541 Q4G0T1 1027 aa17.56■□□□□ 0.4
TREX1-201ENST00000433541 TRIM50Q86XT4 487 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms