RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 G6PC3Q9BUM1 346 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 ACSS2Q9NR19 701 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 SPTLC3Q9NUV7 552 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 GEMIN8Q9NWZ8 242 aaKnown RBP7.93□□□□□ -1.14
USP54-206ENST00000433394 TRHDEQ9UKU6 1024 aa7.93□□□□□ -1.14
USP54-206ENST00000433394 NRDCO43847 1150 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 ADAM23O75077 832 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 FBXO21O94952 628 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 CT47B1P0C2W7 299 aaPredicted RBP7.92□□□□□ -1.14
USP54-206ENST00000433394 GJA4P35212 333 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 JAM2P57087 298 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 CYP4F8P98187 520 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 RALGPS1Q5JS13 557 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 PTRH1Q86Y79 214 aaKnown RBP7.92□□□□□ -1.14
USP54-206ENST00000433394 LILRA2Q8N149 483 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 AGBL5Q8NDL9 886 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 PIP4K2CQ8TBX8 421 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 PHOSPHO1Q8TCT1 267 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 SEMA6BQ9H3T3 888 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 TOMM22Q9NS69 142 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 NOC2LQ9Y3T9 749 aaKnown RBP7.92□□□□□ -1.14
USP54-206ENST00000433394 SPO11Q9Y5K1 396 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 MRFAP1Q9Y605 127 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 ATP23Q9Y6H3 246 aa7.92□□□□□ -1.14
USP54-206ENST00000433394 HGSO14964 777 aaPredicted RBP7.91□□□□□ -1.14
USP54-206ENST00000433394 CFBP00751 764 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 PRNPP04156 253 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 CYP17A1P05093 508 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 TACR1P25103 407 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 CD96P40200 585 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 KIF11P52732 1056 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 AMOTL1Q8IY63 956 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 KIAA1958Q8N8K9 716 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 PLEKHO2Q8TD55 490 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.91□□□□□ -1.14
USP54-206ENST00000433394 SEC14L1Q92503 715 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 YIPF4Q9BSR8 244 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 CDIP1Q9H305 208 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 CRTAC1Q9NQ79 661 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 KCNG1Q9UIX4 513 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 DBR1Q9UK59 544 aaKnown RBP7.91□□□□□ -1.14
USP54-206ENST00000433394 ACSL6Q9UKU0 697 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 SRPK3Q9UPE1 567 aa7.91□□□□□ -1.14
USP54-206ENST00000433394 SHTN1A0MZ66 631 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 SCDO00767 359 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 PRKD3O94806 890 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 SLC6A11P48066 632 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 SNX17Q15036 470 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 NR0B2Q15466 257 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 WDR75Q8IWA0 830 aaKnown RBP7.9□□□□□ -1.14
USP54-206ENST00000433394 NETO2Q8NC67 525 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 UHMK1Q8TAS1 419 aaKnown RBP7.9□□□□□ -1.14
USP54-206ENST00000433394 MTA3Q9BTC8 594 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 SMOC1Q9H4F8 434 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 SP110Q9HB58 689 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 SMURF1Q9HCE7 757 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 GPR160Q9UJ42 338 aa7.9□□□□□ -1.14
USP54-206ENST00000433394 THRAP3Q9Y2W1 955 aaKnown RBP7.9□□□□□ -1.14
USP54-206ENST00000433394 NKRFO15226 690 aaKnown RBP eCLIP7.89□□□□□ -1.15
USP54-206ENST00000433394 CLASP2O75122 1294 aaKnown RBP7.89□□□□□ -1.15
USP54-206ENST00000433394 SNUPNO95149 360 aaKnown RBP7.89□□□□□ -1.15
USP54-206ENST00000433394 NTRK1P04629 796 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 U2AF1L5P0DN76 240 aaPredicted RBP7.89□□□□□ -1.15
USP54-206ENST00000433394 CD40P25942 277 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 U2AF1Q01081 240 aaKnown RBP eCLIP7.89□□□□□ -1.15
USP54-206ENST00000433394 PLCL1Q15111 1095 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 BROXQ5VW32 411 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 KCTD1Q719H9 257 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 NME9Q86XW9 330 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 CCAR1Q8IX12 1150 aaKnown RBP7.89□□□□□ -1.15
USP54-206ENST00000433394 RELTQ969Z4 430 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 PEX11GQ96HA9 241 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 CCDC8Q9H0W5 538 aaPredicted RBP7.89□□□□□ -1.15
USP54-206ENST00000433394 KCNH7Q9NS40 1196 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 CCDC39Q9UFE4 941 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 FAN1Q9Y2M0 1017 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 PCDHB4Q9Y5E5 795 aa7.89□□□□□ -1.15
USP54-206ENST00000433394 GOLGA6CA6NDK9 693 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 GOLGA6BA6NDN3 693 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 AMY2AP04746 511 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 GOLGA6DP0CG33 693 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 MYBL2P10244 700 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 SLC9A1P19634 815 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 AMY2BP19961 511 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 FUT4P22083 530 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 GDNFP39905 211 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 PHC1P78364 1004 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 MVKQ03426 396 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 MCL1Q07820 350 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 KLF1Q13351 362 aaPredicted RBP7.88□□□□□ -1.15
USP54-206ENST00000433394 PIN1Q13526 163 aaPredicted RBP7.88□□□□□ -1.15
USP54-206ENST00000433394 TMEM132BQ14DG7 1078 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 NFE2Q16621 373 aaPredicted RBP7.88□□□□□ -1.15
USP54-206ENST00000433394 PTPN21Q16825 1174 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 HABP4Q5JVS0 413 aaKnown RBP7.88□□□□□ -1.15
USP54-206ENST00000433394 GPR158Q5T848 1215 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 CC2D1AQ6P1N0 951 aaPredicted RBP7.88□□□□□ -1.15
USP54-206ENST00000433394 PNMA8AQ86V59 439 aaPredicted RBP7.88□□□□□ -1.15
USP54-206ENST00000433394 RASSF3Q86WH2 238 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 TP53INP2Q8IXH6 220 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms