RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ASH2LQ9UBL3 628 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 TRAF6Q9Y4K3 522 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 SLC27A2O14975 620 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 FAM153BP0C7A2 387 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 LONRF2Q1L5Z9 754 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 NT5DC1Q5TFE4 455 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 ERICH6BQ5W0A0 696 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 TEPPQ6URK8 271 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 ASXL2Q76L83 1435 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 PTPRN2Q92932 1015 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 MKL1Q969V6 931 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 RELTQ969Z4 430 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 C20orf173Q96LM9 149 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 SYT3Q9BQG1 590 aa5.18□□□□□ -1.58
CLK1-204ENST00000432425 FAM221BA6H8Z2 402 aa5.17□□□□□ -1.58
CLK1-204ENST00000432425 APPP05067 770 aa5.17□□□□□ -1.58
CLK1-204ENST00000432425 COL6A2P12110 1019 aa5.17□□□□□ -1.58
CLK1-204ENST00000432425 NAT1P18440 290 aa5.17□□□□□ -1.58
CLK1-204ENST00000432425 GJA9P57773 515 aa5.17□□□□□ -1.58
CLK1-204ENST00000432425 ZC3H12BQ5HYM0 836 aaKnown RBP5.17□□□□□ -1.58
CLK1-204ENST00000432425 FOXB2Q5VYV0 432 aa5.17□□□□□ -1.58
CLK1-204ENST00000432425 FRMD5Q7Z6J6 570 aa5.17□□□□□ -1.58
CLK1-204ENST00000432425 EXOC2Q96KP1 924 aa5.17□□□□□ -1.58
CLK1-204ENST00000432425 DHRS4Q9BTZ2 278 aa5.17□□□□□ -1.58
CLK1-204ENST00000432425 IPPKQ9H8X2 491 aa5.17□□□□□ -1.58
CLK1-204ENST00000432425 RPL13P26373 211 aaKnown RBP5.16□□□□□ -1.58
CLK1-204ENST00000432425 GABREP78334 506 aa5.16□□□□□ -1.58
CLK1-204ENST00000432425 GRIN1Q05586 938 aa5.16□□□□□ -1.58
CLK1-204ENST00000432425 PAK1Q13153 545 aa5.16□□□□□ -1.58
CLK1-204ENST00000432425 TTLL11Q8NHH1 800 aa5.16□□□□□ -1.58
CLK1-204ENST00000432425 UHMK1Q8TAS1 419 aaKnown RBP5.16□□□□□ -1.58
CLK1-204ENST00000432425 TEPSINQ96N21 525 aa5.16□□□□□ -1.58
CLK1-204ENST00000432425 CLIC6Q96NY7 704 aa5.16□□□□□ -1.58
CLK1-204ENST00000432425 WRNIP1Q96S55 665 aa5.16□□□□□ -1.58
CLK1-204ENST00000432425 DNAJC2Q99543 621 aaKnown RBP5.16□□□□□ -1.58
CLK1-204ENST00000432425 DNAJC7Q99615 494 aa5.16□□□□□ -1.58
CLK1-204ENST00000432425 DSEQ9UL01 958 aa5.16□□□□□ -1.58
CLK1-204ENST00000432425 MRPS23Q9Y3D9 190 aaKnown RBP5.16□□□□□ -1.58
CLK1-204ENST00000432425 LRG1P02750 347 aa5.15□□□□□ -1.58
CLK1-204ENST00000432425 GUCY1A3Q02108 690 aa5.15□□□□□ -1.58
CLK1-204ENST00000432425 ADAM9Q13443 819 aa5.15□□□□□ -1.58
CLK1-204ENST00000432425 TUSC3Q13454 348 aa5.15□□□□□ -1.58
CLK1-204ENST00000432425 PRAMEF18Q5VWM3 479 aa5.15□□□□□ -1.58
CLK1-204ENST00000432425 ADAMTS17Q8TE56 1095 aa5.15□□□□□ -1.58
CLK1-204ENST00000432425 ZSWIM3Q96MP5 696 aa5.15□□□□□ -1.58
CLK1-204ENST00000432425 TMEM209Q96SK2 561 aa5.15□□□□□ -1.58
CLK1-204ENST00000432425 ADAM7Q9H2U9 754 aa5.15□□□□□ -1.58
CLK1-204ENST00000432425 NKRFO15226 690 aaKnown RBP eCLIP5.15□□□□□ -1.59
CLK1-204ENST00000432425 CYP7B1O75881 506 aa5.15□□□□□ -1.59
CLK1-204ENST00000432425 C6orf222P0C671 652 aaPredicted RBP5.15□□□□□ -1.59
CLK1-204ENST00000432425 VASNQ6EMK4 673 aa5.15□□□□□ -1.59
CLK1-204ENST00000432425 TMC5Q6UXY8 1006 aa5.15□□□□□ -1.59
CLK1-204ENST00000432425 ZNF761Q86XN6 746 aaPredicted RBP5.15□□□□□ -1.59
CLK1-204ENST00000432425 RBM12BQ8IXT5 1001 aaKnown RBP5.15□□□□□ -1.59
CLK1-204ENST00000432425 CLEC4DQ8WXI8 215 aa5.15□□□□□ -1.59
CLK1-204ENST00000432425 OSBPL2Q9H1P3 480 aa5.15□□□□□ -1.59
CLK1-204ENST00000432425 CROTQ9UKG9 612 aa5.15□□□□□ -1.59
CLK1-204ENST00000432425 B8ZZF3 427 aa5.14□□□□□ -1.59
CLK1-204ENST00000432425 NOBOXO60393 691 aa5.14□□□□□ -1.59
CLK1-204ENST00000432425 LTFP02788 710 aa5.14□□□□□ -1.59
CLK1-204ENST00000432425 SYN1P17600 705 aa5.14□□□□□ -1.59
CLK1-204ENST00000432425 PAN2Q504Q3 1202 aaKnown RBP5.14□□□□□ -1.59
CLK1-204ENST00000432425 HABP4Q5JVS0 413 aaKnown RBP5.14□□□□□ -1.59
CLK1-204ENST00000432425 FAM26FQ5R3K3 315 aa5.14□□□□□ -1.59
CLK1-204ENST00000432425 UBXN11Q5T124 520 aa5.14□□□□□ -1.59
CLK1-204ENST00000432425 KCTD1Q719H9 257 aa5.14□□□□□ -1.59
CLK1-204ENST00000432425 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.14□□□□□ -1.59
CLK1-204ENST00000432425 ZSWIM2Q8NEG5 633 aa5.14□□□□□ -1.59
CLK1-204ENST00000432425 CXorf38Q8TB03 319 aa5.14□□□□□ -1.59
CLK1-204ENST00000432425 NDOR1Q9UHB4 597 aa5.14□□□□□ -1.59
CLK1-204ENST00000432425 PCDHA8Q9Y5H6 950 aa5.14□□□□□ -1.59
CLK1-204ENST00000432425 DDX3XO00571 662 aaKnown RBP eCLIP5.13□□□□□ -1.59
CLK1-204ENST00000432425 FOXD2O60548 495 aaPredicted RBP5.13□□□□□ -1.59
CLK1-204ENST00000432425 FAHP16930 419 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 ST5P78524 1137 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 NFE2L2Q16236 605 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 RGL3Q3MIN7 710 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 PRR31Q5SQ13 230 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 MCTP2Q6DN12 878 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 EP400NLQ6ZTU2 488 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 FAM124AQ86V42 546 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 THAP3Q8WTV1 239 aaPredicted RBP5.13□□□□□ -1.59
CLK1-204ENST00000432425 KISS1RQ969F8 398 aaPredicted RBP5.13□□□□□ -1.59
CLK1-204ENST00000432425 FBXW5Q969U6 566 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 L2HGDHQ9H9P8 463 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 CATSPERZQ9NTU4 200 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 HSPBP1Q9NZL4 362 aa5.13□□□□□ -1.59
CLK1-204ENST00000432425 GSTA4O15217 222 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 EFCAB14O75071 495 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 SRGAP2CP0DJJ0 459 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 KIAA2012Q0VF49 1180 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 FAM47CQ5HY64 1035 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 ZC3H7AQ8IWR0 971 aaKnown RBP5.12□□□□□ -1.59
CLK1-204ENST00000432425 DDX1Q92499 740 aaKnown RBP5.12□□□□□ -1.59
CLK1-204ENST00000432425 LNPKQ9C0E8 428 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 DLL4Q9NR61 685 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 PCDHA9Q9Y5H5 950 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 CCDC163A0A0D9SF12 145 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 MROH6A6NGR9 719 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms