RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 NR3C2P08235 984 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 PARP1P09874 1014 aaKnown RBP9.65□□□□□ -0.86
CDH13-203ENST00000431540 GNAT1P11488 350 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 CKBP12277 381 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 MYOGP15173 224 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 SNAP25P60880 206 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 WDR5P61964 334 aaKnown RBP9.65□□□□□ -0.86
CDH13-203ENST00000431540 HTRA4P83105 476 aaPredicted RBP9.65□□□□□ -0.86
CDH13-203ENST00000431540 GPNMBQ14956 572 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 RRP12Q5JTH9 1297 aaKnown RBP9.65□□□□□ -0.86
CDH13-203ENST00000431540 ARHGEF16Q5VV41 709 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 MYSM1Q5VVJ2 828 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 SLC30A10Q6XR72 485 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 VSIG10LQ86VR7 867 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 TEX2Q8IWB9 1127 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 ADGRF4Q8IZF3 695 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 AFG1LQ8WV93 481 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 MTMR8Q96EF0 704 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 CTAGE1Q96RT6 745 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 ZSCAN10Q96SZ4 725 aaPredicted RBP9.65□□□□□ -0.86
CDH13-203ENST00000431540 IL21Q9HBE4 155 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 FAM50BQ9Y247 325 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 HCN4Q9Y3Q4 1203 aa9.65□□□□□ -0.86
CDH13-203ENST00000431540 FRMPD2Q68DX3 1309 aaPredicted RBP9.64□□□□□ -0.87
CDH13-203ENST00000431540 XIRP2A4UGR9 3374 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 LOC100996750A0A140TA64 210 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 ARIH2O95376 493 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 ALADP13716 330 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 SDSP20132 328 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 SMARCA1P28370 1054 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 HOXC8P31273 242 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 GRB10Q13322 594 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 SKIV2LQ15477 1246 aaKnown RBP9.64□□□□□ -0.87
CDH13-203ENST00000431540 CDC37Q16543 378 aaPredicted RBP9.64□□□□□ -0.87
CDH13-203ENST00000431540 PTPROQ16827 1216 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 IMMTQ16891 758 aaKnown RBP9.64□□□□□ -0.87
CDH13-203ENST00000431540 LEXMQ3ZCV2 418 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 TMEM31Q5JXX7 168 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 GDF6Q6KF10 455 aaPredicted RBP9.64□□□□□ -0.87
CDH13-203ENST00000431540 TYW1BQ6NUM6 668 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 XRRA1Q6P2D8 792 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 RPAINQ86UA6 219 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 SERINC5Q86VE9 423 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 SMC5Q8IY18 1101 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 DHX37Q8IY37 1157 aaKnown RBP9.64□□□□□ -0.87
CDH13-203ENST00000431540 OTUD7AQ8TE49 926 aaPredicted RBP9.64□□□□□ -0.87
CDH13-203ENST00000431540 ARNTL2Q8WYA1 636 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 APBB2Q92870 758 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 TAAR1Q96RJ0 339 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 MTRQ99707 1265 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 USP26Q9BXU7 913 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 KRTAP4-6Q9BYQ5 205 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 RWDD1Q9H446 243 aaPredicted RBP9.64□□□□□ -0.87
CDH13-203ENST00000431540 PXMP2Q9NR77 195 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 ZSWIM5Q9P217 1185 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 PRKAG3Q9UGI9 489 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 TTC3P53804 2025 aa9.64□□□□□ -0.87
CDH13-203ENST00000431540 A0A0D9SFI3 127 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 TRIM6-TRIM34B2RNG4 842 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 ZBTB5O15062 677 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 LGR5O75473 907 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 AMHP03971 560 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 RB1P06400 928 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 ICAM3P32942 547 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 MFSD10Q14728 455 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 COL19A1Q14993 1142 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 LY6KQ17RY6 165 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 KIAA0753Q2KHM9 967 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 TRIM71Q2Q1W2 868 aaKnown RBP9.63□□□□□ -0.87
CDH13-203ENST00000431540 CELF3Q5SZQ8 465 aaKnown RBP9.63□□□□□ -0.87
CDH13-203ENST00000431540 SEPT14Q6ZU15 432 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 GIMAP8Q8ND71 665 aaPredicted RBP9.63□□□□□ -0.87
CDH13-203ENST00000431540 COPS5Q92905 334 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 FAM227BQ96M60 508 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 MAP3K14Q99558 947 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 SENP7Q9BQF6 1050 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 MTA3Q9BTC8 594 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 LRFN3Q9BTN0 628 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 JMJD4Q9H9V9 463 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 SUGCTQ9HAC7 445 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 HDAC6Q9UBN7 1215 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 RWDD3Q9Y3V2 267 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 MRVI1Q9Y6F6 885 aa9.63□□□□□ -0.87
CDH13-203ENST00000431540 LINC01553A4QN01 128 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 PRR33A8MZF0 331 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 RSPH10B2B2RC85 870 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 MAFGO15525 162 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 NBNO60934 754 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 RSPH10BP0C881 870 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 TFF2Q03403 129 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 NMIQ13287 307 aaPredicted RBP9.62□□□□□ -0.87
CDH13-203ENST00000431540 NEDD9Q14511 834 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 QRICH1Q2TAL8 776 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 GNPTABQ3T906 1256 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 USH1GQ495M9 461 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 PLEKHG4Q58EX7 1191 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 FAM26DQ5JW98 314 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 FAM178BQ8IXR5 827 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 ENAHQ8N8S7 591 aaPredicted RBP9.62□□□□□ -0.87
CDH13-203ENST00000431540 TNPO1Q92973 898 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms