RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ARMC5Q96C12 935 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 SCAND2PQ9GZW5 306 aaPredicted RBP12.43□□□□□ -0.42
CHD4-202ENST00000430771 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.43□□□□□ -0.42
CHD4-202ENST00000430771 MLXIPQ9HAP2 919 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 SPC25Q9HBM1 224 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 DDX20Q9UHI6 824 aaKnown RBP12.43□□□□□ -0.42
CHD4-202ENST00000430771 Q9Y3F1 56 aa12.43□□□□□ -0.42
CHD4-202ENST00000430771 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.42□□□□□ -0.42
CHD4-202ENST00000430771 NOP56O00567 594 aaKnown RBP12.42□□□□□ -0.42
CHD4-202ENST00000430771 DUSP11O75319 330 aaKnown RBP12.42□□□□□ -0.42
CHD4-202ENST00000430771 FARP2O94887 1054 aaPredicted RBP12.42□□□□□ -0.42
CHD4-202ENST00000430771 SMPD1P17405 629 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
CHD4-202ENST00000430771 ITGB3BPQ13352 177 aaPredicted RBP12.42□□□□□ -0.42
CHD4-202ENST00000430771 LAMC2Q13753 1193 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 LY6KQ17RY6 165 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 CSPP1Q1MSJ5 1256 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 BRDTQ58F21 947 aaPredicted RBP12.42□□□□□ -0.42
CHD4-202ENST00000430771 DHX37Q8IY37 1157 aaKnown RBP12.42□□□□□ -0.42
CHD4-202ENST00000430771 SMAP1Q8IYB5 467 aaPredicted RBP12.42□□□□□ -0.42
CHD4-202ENST00000430771 FERMT2Q96AC1 680 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 ZNF333Q96JL9 665 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 MTMR9Q96QG7 549 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 FTOQ9C0B1 505 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHD4-202ENST00000430771 MCOLN1Q9GZU1 580 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 TMEM60Q9H2L4 133 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 SLC9A2Q9UBY0 812 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 GNEQ9Y223 722 aaKnown RBP12.42□□□□□ -0.42
CHD4-202ENST00000430771 CLIC4Q9Y696 253 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 TCHHQ07283 1943 aa12.42□□□□□ -0.42
CHD4-202ENST00000430771 ELP1O95163 1332 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 DDX39AO00148 427 aaKnown RBP12.41□□□□□ -0.42
CHD4-202ENST00000430771 SPTLC2O15270 562 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 PPP6R2O75170 966 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 PSMD10O75832 226 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 SFNP31947 248 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 TXKP42681 527 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 CPT1AP50416 773 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 JAK3P52333 1124 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 ARHGAP1Q07960 439 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 PPP2R5CQ13362 524 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 SLC39A14Q15043 492 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 PTPAQ15257 358 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 CELF3Q5SZQ8 465 aaKnown RBP12.41□□□□□ -0.42
CHD4-202ENST00000430771 HAUS3Q68CZ6 603 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 ZNF746Q6NUN9 644 aaPredicted RBP12.41□□□□□ -0.42
CHD4-202ENST00000430771 DTHD1Q6ZMT9 781 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 CYFIP1Q7L576 1253 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 LINC00301Q8NCQ3 95 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 RDM1Q8NG50 284 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 HAS1Q92839 578 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 TNPO1Q92973 898 aaKnown RBP12.41□□□□□ -0.42
CHD4-202ENST00000430771 SPATA32Q96LK8 384 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 SPATA33Q96N06 139 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 AP5M1Q9H0R1 490 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 TTC12Q9H892 705 aaPredicted RBP12.41□□□□□ -0.42
CHD4-202ENST00000430771 STK24Q9Y6E0 443 aa12.41□□□□□ -0.42
CHD4-202ENST00000430771 SYNRGQ9UMZ2 1314 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 WDR64B1ANS9 1081 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 ADCY6O43306 1168 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 CHMP2AO43633 222 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 ATP9AO75110 1047 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 CCL5P13501 91 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.423e-13■■■□□ 17.5
CHD4-202ENST00000430771 SP2Q02086 613 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 SP4Q02446 784 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 MIER3Q7Z3K6 550 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 C4orf32Q8N8J7 132 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 KRI1Q8N9T8 703 aaKnown RBP12.4□□□□□ -0.42
CHD4-202ENST00000430771 PPTC7Q8NI37 304 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 ERMNQ8TAM6 284 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 COPS5Q92905 334 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 LENG1Q96BZ8 264 aaPredicted RBP12.4□□□□□ -0.42
CHD4-202ENST00000430771 GBP4Q96PP9 640 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 RNF208Q9H0X6 261 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 UNC93B1Q9H1C4 597 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 UPF3AQ9H1J1 476 aaKnown RBP12.4□□□□□ -0.42
CHD4-202ENST00000430771 XPNPEP3Q9NQH7 507 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 PAK6Q9NQU5 681 aaPredicted RBP12.4□□□□□ -0.42
CHD4-202ENST00000430771 VAV3Q9UKW4 847 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 PCDHA12Q9UN75 941 aa12.4□□□□□ -0.42
CHD4-202ENST00000430771 LOXHD1Q8IVV2 1947 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 VWA3AA6NCI4 1184 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 DHX15O43143 795 aaKnown RBP12.39□□□□□ -0.43
CHD4-202ENST00000430771 ZEB2O60315 1214 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 MMP3P08254 477 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 C6orf222P0C671 652 aaPredicted RBP12.39□□□□□ -0.43
CHD4-202ENST00000430771 GJA9P57773 515 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 MTFR1Q15390 333 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 GJC2Q5T442 439 aaPredicted RBP12.39□□□□□ -0.43
CHD4-202ENST00000430771 NCAPH2Q6IBW4 605 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 MIS18BP1Q6P0N0 1132 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 NEK9Q8TD19 979 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 LEO1Q8WVC0 666 aaPredicted RBP12.39□□□□□ -0.43
CHD4-202ENST00000430771 GJA10Q969M2 543 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 AK8Q96MA6 479 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 UIMC1Q96RL1 719 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 UNC45AQ9H3U1 944 aa12.39□□□□□ -0.43
CHD4-202ENST00000430771 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
CHD4-202ENST00000430771 SAMM50Q9Y512 469 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms