RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 NFASCO94856 1347 aa22.82■■□□□ 1.24
CSNK1E-207ENST00000430335 HSDL1Q3SXM5 330 aa22.81■■□□□ 1.24
CSNK1E-207ENST00000430335 Q4G0T1 1027 aa22.81■■□□□ 1.24
CSNK1E-207ENST00000430335 PRR16Q569H4 304 aa22.81■■□□□ 1.24
CSNK1E-207ENST00000430335 FERMT2Q96AC1 680 aa22.81■■□□□ 1.24
CSNK1E-207ENST00000430335 NAP1L4Q99733 375 aaKnown RBP22.81■■□□□ 1.24
CSNK1E-207ENST00000430335 BCAS3Q9H6U6 928 aa22.81■■□□□ 1.24
CSNK1E-207ENST00000430335 GCFC2P16383 781 aaKnown RBP22.8■■□□□ 1.24
CSNK1E-207ENST00000430335 PURAQ00577 322 aaKnown RBP22.8■■□□□ 1.24
CSNK1E-207ENST00000430335 DGKDQ16760 1214 aa22.8■■□□□ 1.24
CSNK1E-207ENST00000430335 C1orf53Q5VUE5 145 aa22.8■■□□□ 1.24
CSNK1E-207ENST00000430335 PPP4R3AQ6IN85 833 aa22.8■■□□□ 1.24
CSNK1E-207ENST00000430335 CXCL17Q6UXB2 119 aa22.8■■□□□ 1.24
CSNK1E-207ENST00000430335 SLC39A5Q6ZMH5 540 aa22.8■■□□□ 1.24
CSNK1E-207ENST00000430335 STARD7Q9NQZ5 370 aa22.8■■□□□ 1.24
CSNK1E-207ENST00000430335 PPFIA4O75335 1185 aa22.79■■□□□ 1.24
CSNK1E-207ENST00000430335 MYL3P08590 195 aa22.79■■□□□ 1.24
CSNK1E-207ENST00000430335 MLLT1Q03111 559 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-207ENST00000430335 ITGB3BPQ13352 177 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-207ENST00000430335 SNX17Q15036 470 aa22.79■■□□□ 1.24
CSNK1E-207ENST00000430335 LETM2Q2VYF4 491 aa22.79■■□□□ 1.24
CSNK1E-207ENST00000430335 SDF4Q9BRK5 362 aa22.79■■□□□ 1.24
CSNK1E-207ENST00000430335 MTG1Q9BT17 334 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-207ENST00000430335 FAM205CA6NFA0 338 aa22.78■■□□□ 1.24
CSNK1E-207ENST00000430335 SORBS3O60504 671 aa22.78■■□□□ 1.24
CSNK1E-207ENST00000430335 TDP2O95551 362 aa22.78■■□□□ 1.24
CSNK1E-207ENST00000430335 U2AF2P26368 475 aaKnown RBP eCLIP22.78■■□□□ 1.24
CSNK1E-207ENST00000430335 LARP1BQ659C4 914 aaKnown RBP22.78■■□□□ 1.24
CSNK1E-207ENST00000430335 GPR20Q99678 358 aa22.78■■□□□ 1.24
CSNK1E-207ENST00000430335 ZNF577Q9BSK1 485 aa22.78■■□□□ 1.24
CSNK1E-207ENST00000430335 JPH1Q9HDC5 661 aaPredicted RBP22.78■■□□□ 1.24
CSNK1E-207ENST00000430335 TBC1D22BQ9NU19 505 aa22.78■■□□□ 1.24
CSNK1E-207ENST00000430335 PKD2L1Q9P0L9 805 aa22.78■■□□□ 1.24
CSNK1E-207ENST00000430335 H3BQV1 296 aa22.77■■□□□ 1.24
CSNK1E-207ENST00000430335 IPO5O00410 1097 aaKnown RBP22.77■■□□□ 1.24
CSNK1E-207ENST00000430335 NOP56O00567 594 aaKnown RBP22.77■■□□□ 1.24
CSNK1E-207ENST00000430335 PDCP20941 246 aa22.77■■□□□ 1.24
CSNK1E-207ENST00000430335 LRRC26Q2I0M4 334 aa22.77■■□□□ 1.24
CSNK1E-207ENST00000430335 NOSTRINQ8IVI9 506 aa22.77■■□□□ 1.24
CSNK1E-207ENST00000430335 SEZ6LQ9BYH1 1024 aa22.77■■□□□ 1.24
CSNK1E-207ENST00000430335 DDX25Q9UHL0 483 aaKnown RBP22.77■■□□□ 1.24
CSNK1E-207ENST00000430335 A0A0U1RQG5 324 aaPredicted RBP22.76■■□□□ 1.23
CSNK1E-207ENST00000430335 MSH4O15457 936 aa22.76■■□□□ 1.23
CSNK1E-207ENST00000430335 DHX15O43143 795 aaKnown RBP22.76■■□□□ 1.23
CSNK1E-207ENST00000430335 ATN1P54259 1190 aaPredicted RBP22.76■■□□□ 1.23
CSNK1E-207ENST00000430335 GNL2Q13823 731 aaKnown RBP22.76■■□□□ 1.23
CSNK1E-207ENST00000430335 SLC43A3Q8NBI5 491 aa22.76■■□□□ 1.23
CSNK1E-207ENST00000430335 VTI1AQ96AJ9 217 aa22.76■■□□□ 1.23
CSNK1E-207ENST00000430335 SLC9A2Q9UBY0 812 aa22.76■■□□□ 1.23
CSNK1E-207ENST00000430335 KIF28PB7ZC32 967 aa22.75■■□□□ 1.23
CSNK1E-207ENST00000430335 CCNT1O60563 726 aaKnown RBP22.75■■□□□ 1.23
CSNK1E-207ENST00000430335 CDK7P50613 346 aa22.75■■□□□ 1.23
CSNK1E-207ENST00000430335 SEPT1Q8WYJ6 367 aa22.75■■□□□ 1.23
CSNK1E-207ENST00000430335 SLC5A5Q92911 643 aa22.75■■□□□ 1.23
CSNK1E-207ENST00000430335 ARVCFO00192 962 aa22.74■■□□□ 1.23
CSNK1E-207ENST00000430335 SLC37A4O43826 429 aa22.74■■□□□ 1.23
CSNK1E-207ENST00000430335 F2P00734 622 aa22.74■■□□□ 1.23
CSNK1E-207ENST00000430335 SP4Q02446 784 aa22.74■■□□□ 1.23
CSNK1E-207ENST00000430335 ITGA7Q13683 1181 aa22.74■■□□□ 1.23
CSNK1E-207ENST00000430335 ETNPPLQ8TBG4 499 aa22.74■■□□□ 1.23
CSNK1E-207ENST00000430335 KAT2BQ92831 832 aa22.74■■□□□ 1.23
CSNK1E-207ENST00000430335 RIT2Q99578 217 aa22.74■■□□□ 1.23
CSNK1E-207ENST00000430335 KATNAL1Q9BW62 490 aa22.74■■□□□ 1.23
CSNK1E-207ENST00000430335 TELO2Q9Y4R8 837 aa22.74■■□□□ 1.23
CSNK1E-207ENST00000430335 GRIN2DO15399 1336 aa22.74■■□□□ 1.23
CSNK1E-207ENST00000430335 GSTTP1A0A1W2PQM5 241 aa22.73■■□□□ 1.23
CSNK1E-207ENST00000430335 TBX3O15119 743 aa22.73■■□□□ 1.23
CSNK1E-207ENST00000430335 LGALS2P05162 132 aa22.73■■□□□ 1.23
CSNK1E-207ENST00000430335 TRAPPC10P48553 1259 aa22.73■■□□□ 1.23
CSNK1E-207ENST00000430335 RTP1P59025 263 aa22.73■■□□□ 1.23
CSNK1E-207ENST00000430335 DPF3Q92784 378 aa22.73■■□□□ 1.23
CSNK1E-207ENST00000430335 C16orf70Q9BSU1 422 aa22.73■■□□□ 1.23
CSNK1E-207ENST00000430335 KCNMB3Q9NPA1 279 aa22.73■■□□□ 1.23
CSNK1E-207ENST00000430335 HAS3O00219 553 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 ATG7O95352 703 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 ZNF286BP0CG31 522 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 TCF7P36402 384 aaPredicted RBP22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 ACTR2P61160 394 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 PSMC6P62333 389 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 KRT76Q01546 638 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 ORC2Q13416 577 aaPredicted RBP22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 MCTP1Q6DN14 999 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 ZNF746Q6NUN9 644 aaPredicted RBP22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 ANKRD33Q7Z3H0 272 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 FAM20AQ96MK3 541 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 TOX2Q96NM4 488 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 FOXD4L1Q9NU39 408 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 MROH7Q68CQ1 1323 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 SCN10AQ9Y5Y9 1956 aa22.72■■□□□ 1.23
CSNK1E-207ENST00000430335 EVI5O60447 810 aa22.71■■□□□ 1.23
CSNK1E-207ENST00000430335 PSMD10O75832 226 aa22.71■■□□□ 1.23
CSNK1E-207ENST00000430335 CCNE2O96020 404 aa22.71■■□□□ 1.23
CSNK1E-207ENST00000430335 HSP90AA1P07900 732 aaKnown RBP22.71■■□□□ 1.23
CSNK1E-207ENST00000430335 PSEN2P49810 448 aa22.71■■□□□ 1.23
CSNK1E-207ENST00000430335 NBPF20Q3BBV1 942 aa22.71■■□□□ 1.23
CSNK1E-207ENST00000430335 TRIM60Q495X7 471 aa22.71■■□□□ 1.23
CSNK1E-207ENST00000430335 NFRKBQ6P4R8 1299 aa22.71■■□□□ 1.23
CSNK1E-207ENST00000430335 TEKT3Q9BXF9 490 aa22.71■■□□□ 1.23
CSNK1E-207ENST00000430335 TCEAL9Q9UHQ7 104 aa22.71■■□□□ 1.23
CSNK1E-207ENST00000430335 NOL7Q9UMY1 257 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms