RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 FAM86B1E9PN63 330 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 CPLX1O14810 134 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 TLR3O15455 904 aaKnown RBP12.28□□□□□ -0.44
ATG4B-210ENST00000428861 PPFIA4O75335 1185 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 DEXIO95424 95 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 FOSP01100 380 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-210ENST00000428861 LGALS2P05162 132 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 FAM86B2P0C5J1 330 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 FDPSP14324 419 aaKnown RBP12.28□□□□□ -0.44
ATG4B-210ENST00000428861 ARHGAP4P98171 946 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 ZNF200P98182 395 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-210ENST00000428861 SP4Q02446 784 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 AP3B2Q13367 1082 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 MTMR1Q13613 665 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 NEDD9Q14511 834 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 MFSD10Q14728 455 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 SHHQ15465 462 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 GDF6Q6KF10 455 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-210ENST00000428861 MFSD5Q6N075 450 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 TRIM50Q86XT4 487 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 LRCH3Q96II8 777 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 UIMC1Q96RL1 719 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 ALG1Q9BT22 464 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 WNT8AQ9H1J5 351 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 C6orf50Q9HD87 102 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 KCNH7Q9NS40 1196 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 HDAC6Q9UBN7 1215 aa12.28□□□□□ -0.44
ATG4B-210ENST00000428861 IGLV3-22A0A075B6J6 115 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 GSTTP1A0A1W2PQM5 241 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 M0R2N6 131 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 MEIS1O00470 390 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 CSF2RAP15509 400 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 CCL23P55773 120 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 ITGB3BPQ13352 177 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-210ENST00000428861 ANKRD1Q15327 319 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 KIAA0753Q2KHM9 967 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 CEP55Q53EZ4 464 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 SESTD1Q86VW0 696 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 TEX2Q8IWB9 1127 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 TRIM22Q8IYM9 498 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 REXO1Q8N1G1 1221 aaKnown RBP12.27□□□□□ -0.45
ATG4B-210ENST00000428861 WNT8BQ93098 351 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 GTF3C6Q969F1 213 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 SEZ6LQ9BYH1 1024 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 C22orf23Q9BZE7 217 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 GLT8D2Q9H1C3 349 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 HIPK3Q9H422 1215 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 AGO4Q9HCK5 861 aaKnown RBP12.27□□□□□ -0.45
ATG4B-210ENST00000428861 SH3GLB2Q9NR46 395 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 KCNJ14Q9UNX9 436 aa12.27□□□□□ -0.45
ATG4B-210ENST00000428861 JAK2O60674 1132 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 EIF5BO60841 1220 aaKnown RBP12.26□□□□□ -0.45
ATG4B-210ENST00000428861 CYP3A4P08684 503 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 ACRP10323 421 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 GNA11P29992 359 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
ATG4B-210ENST00000428861 NLRP5P59047 1200 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 FPGSQ05932 587 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 PTPN11Q06124 597 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-210ENST00000428861 UTP14CQ5TAP6 766 aaKnown RBP12.26□□□□□ -0.45
ATG4B-210ENST00000428861 NSUN7Q8NE18 718 aaKnown RBP12.26□□□□□ -0.45
ATG4B-210ENST00000428861 CCDC148Q8NFR7 591 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 CCDC12Q8WUD4 166 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-210ENST00000428861 DHX38Q92620 1227 aaKnown RBP12.26□□□□□ -0.45
ATG4B-210ENST00000428861 SCLYQ96I15 445 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 PCYT2Q99447 389 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 EHMT1Q9H9B1 1298 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 GTF2IRD1Q9UHL9 959 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 PCDHA4Q9UN74 947 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 STK36Q9NRP7 1315 aa12.26□□□□□ -0.45
ATG4B-210ENST00000428861 H3BRB1 525 aa12.25□□□□□ -0.45
ATG4B-210ENST00000428861 NOP56O00567 594 aaKnown RBP12.25□□□□□ -0.45
ATG4B-210ENST00000428861 PTGISQ16647 500 aa12.25□□□□□ -0.45
ATG4B-210ENST00000428861 LRIT3Q3SXY7 679 aa12.25□□□□□ -0.45
ATG4B-210ENST00000428861 CPLX2Q6PUV4 134 aaKnown RBP12.25□□□□□ -0.45
ATG4B-210ENST00000428861 LENG9Q96B70 501 aa12.25□□□□□ -0.45
ATG4B-210ENST00000428861 CDHR1Q96JP9 859 aa12.25□□□□□ -0.45
ATG4B-210ENST00000428861 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.25□□□□□ -0.455e-13■□□□□ 10.4
ATG4B-210ENST00000428861 TUT1Q9H6E5 874 aaKnown RBP12.25□□□□□ -0.45
ATG4B-210ENST00000428861 MAFGO15525 162 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 DHX15O43143 795 aaKnown RBP12.24□□□□□ -0.45
ATG4B-210ENST00000428861 CDKL5O76039 1030 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 CCNE2O96020 404 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 SUPT20HL2P0C7V6 817 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 HOXC8P31273 242 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 CIITAP33076 1130 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 TCF7P36402 384 aaPredicted RBP12.24□□□□□ -0.45
ATG4B-210ENST00000428861 ZNF76P36508 570 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 GPNMBQ14956 572 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 TMEM240Q5SV17 173 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 PLA2G4DQ86XP0 818 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 BLIDQ8IZY5 108 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 C7orf31Q8N865 590 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 DAGLBQ8NCG7 672 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 BICD2Q8TD16 824 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 OXER1Q8TDS5 423 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 PHF20Q9BVI0 1012 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 KATNAL1Q9BW62 490 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 RNPEPQ9H4A4 650 aa12.24□□□□□ -0.45
ATG4B-210ENST00000428861 JPH1Q9HDC5 661 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms