RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 WDR78Q5VTH9 848 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 NCAPG2Q86XI2 1143 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 MSANTD4Q8NCY6 345 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 PHF20Q9BVI0 1012 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 SPATC1LQ9H0A9 340 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 SH3GLB2Q9NR46 395 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 RNF146Q9NTX7 359 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 ABCB11O95342 1321 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 DOCK3Q8IZD9 2030 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 MMP1P03956 469 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 ADCY7P51828 1080 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 OAZ1P54368 228 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 ERVK-9P63128 1117 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 ERVK-24P63145 666 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 UBE2SQ16763 222 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 Q3C1V9 767 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 ATL3Q6DD88 541 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 DIS3L2Q8IYB7 885 aaKnown RBP12.72□□□□□ -0.37
CECR3-201ENST00000428828 BICD2Q8TD16 824 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 RASGRP4Q8TDF6 673 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 OXER1Q8TDS5 423 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 PGBD1Q96JS3 809 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 VIPAS39Q9H9C1 493 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 C6orf50Q9HD87 102 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 CFAP45Q9UL16 551 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 L1RE1Q9UN81 338 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 RABGAP1Q9Y3P9 1069 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 NFIBO00712 420 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 CFBP00751 764 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 HNRNPH1P31943 449 aaKnown RBP12.72□□□□□ -0.37
CECR3-201ENST00000428828 KRT2P35908 639 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 GCLCP48506 637 aaPredicted RBP12.72□□□□□ -0.37
CECR3-201ENST00000428828 SETQ01105 290 aaPredicted RBP12.72□□□□□ -0.37
CECR3-201ENST00000428828 SAFBQ15424 915 aaKnown RBP eCLIP12.72□□□□□ -0.37
CECR3-201ENST00000428828 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 GTF3C2Q8WUA4 911 aaPredicted RBP12.72□□□□□ -0.37
CECR3-201ENST00000428828 CUL5Q93034 780 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 MOV10L1Q9BXT6 1211 aaKnown RBP12.72□□□□□ -0.37
CECR3-201ENST00000428828 PSTPIP2Q9H939 334 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 ZFYVE28Q9HCC9 887 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 PDE11AQ9HCR9 933 aa12.72□□□□□ -0.37
CECR3-201ENST00000428828 MRPL11Q9Y3B7 192 aaKnown RBP12.72□□□□□ -0.37
CECR3-201ENST00000428828 BTBD18B2RXH4 712 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 KIF28PB7ZC32 967 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 OPLAHO14841 1288 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 ATP2A1O14983 1001 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 HOXA13P31271 388 aaPredicted RBP12.71□□□□□ -0.37
CECR3-201ENST00000428828 TRAF1Q13077 416 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 NR5A1Q13285 461 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 HSP90B2PQ58FF3 399 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 FOXR1Q6PIV2 292 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 USP17L6PQ6QN14 398 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 NSMFQ6X4W1 530 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 MICALL1Q8N3F8 863 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 GPRC5AQ8NFJ5 357 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 TBC1D5Q92609 795 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 ZMYND12Q9H0C1 365 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 R3HDMLQ9H3Y0 253 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 TMEM260Q9NX78 707 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 BIN2Q9UBW5 565 aaPredicted RBP12.71□□□□□ -0.37
CECR3-201ENST00000428828 PCDHA4Q9UN74 947 aa12.71□□□□□ -0.37
CECR3-201ENST00000428828 CALML3P27482 149 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 GNA11P29992 359 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 AARSP49588 968 aaKnown RBP eCLIP12.7□□□□□ -0.38
CECR3-201ENST00000428828 MNAT1P51948 309 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 NPY5RQ15761 445 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 TPRNQ4KMQ1 711 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 RIOX2Q8IUF8 465 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 CCAR1Q8IX12 1150 aaKnown RBP12.7□□□□□ -0.38
CECR3-201ENST00000428828 BLIDQ8IZY5 108 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 PORCNQ9H237 461 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 ACAD9Q9H845 621 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 RIC8AQ9NPQ8 531 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 MCM3APO60318 1980 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 ADGRA2Q96PE1 1338 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 FANCGO15287 622 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 TLR2O60603 784 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 SHOX2O60902 331 aaPredicted RBP12.7□□□□□ -0.38
CECR3-201ENST00000428828 TRPA1O75762 1119 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 ALDH1A1P00352 501 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 IRX1P78414 480 aaPredicted RBP12.7□□□□□ -0.38
CECR3-201ENST00000428828 NEDD9Q14511 834 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 SLC30A10Q6XR72 485 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 REXO1Q8N1G1 1221 aaKnown RBP12.7□□□□□ -0.38
CECR3-201ENST00000428828 CLEC4DQ8WXI8 215 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 FAN1Q9Y2M0 1017 aa12.7□□□□□ -0.38
CECR3-201ENST00000428828 ESYT2A0FGR8 921 aa12.69□□□□□ -0.38
CECR3-201ENST00000428828 KLHL33A6NCF5 533 aa12.69□□□□□ -0.38
CECR3-201ENST00000428828 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
CECR3-201ENST00000428828 ARHGAP6O43182 974 aa12.69□□□□□ -0.38
CECR3-201ENST00000428828 CA12O43570 354 aa12.69□□□□□ -0.38
CECR3-201ENST00000428828 MRPL12P52815 198 aaKnown RBP12.69□□□□□ -0.38
CECR3-201ENST00000428828 FAM110CQ1W6H9 321 aa12.69□□□□□ -0.38
CECR3-201ENST00000428828 MAP9Q49MG5 647 aa12.69□□□□□ -0.38
CECR3-201ENST00000428828 REM2Q8IYK8 340 aaPredicted RBP12.69□□□□□ -0.38
CECR3-201ENST00000428828 CEP112Q8N8E3 955 aa12.69□□□□□ -0.38
CECR3-201ENST00000428828 CNNM3Q8NE01 707 aa12.69□□□□□ -0.38
CECR3-201ENST00000428828 PNMA2Q9UL42 364 aa12.69□□□□□ -0.38
CECR3-201ENST00000428828 VWA3AA6NCI4 1184 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 GCOM1H8Y6P7 765 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms