RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 DNAJC19Q96DA6 116 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 LRRC27Q9C0I9 530 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 JMJD4Q9H9V9 463 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 QSER1Q2KHR3 1735 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 PPP1R11O60927 126 aaPredicted RBP15.81■□□□□ 0.12
LIG1-202ENST00000427526 TTLL1O95922 423 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 C2orf54Q08AI8 447 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 ZCWPW2Q504Y3 356 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 IQCEQ6IPM2 695 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 RRAGAQ7L523 313 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 SH3BP5LQ7L8J4 393 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 MRIQ9BWK5 157 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 EDEM3Q9BZQ6 932 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 PNMA6FA0A0J9YX94 578 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 PJA2O43164 708 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 MOCS3O95396 460 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 FKBP1AP62942 108 aaKnown RBP15.81■□□□□ 0.12
LIG1-202ENST00000427526 KCNMA1Q12791 1236 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 PPP1R18Q6NYC8 613 aa15.81■□□□□ 0.12
LIG1-202ENST00000427526 RNF40O75150 1001 aa15.8■□□□□ 0.12
LIG1-202ENST00000427526 LRRC41Q15345 812 aa15.8■□□□□ 0.12
LIG1-202ENST00000427526 ARHGAP27Q6ZUM4 889 aa15.8■□□□□ 0.12
LIG1-202ENST00000427526 TDRD3Q9H7E2 651 aaKnown RBP15.8■□□□□ 0.12
LIG1-202ENST00000427526 FAM204AQ9H8W3 233 aa15.8■□□□□ 0.12
LIG1-202ENST00000427526 SALL4Q9UJQ4 1053 aa15.8■□□□□ 0.12
LIG1-202ENST00000427526 ZNF543Q08ER8 600 aa15.8■□□□□ 0.12
LIG1-202ENST00000427526 HGSNATQ68CP4 663 aa15.8■□□□□ 0.12
LIG1-202ENST00000427526 TTBK2Q6IQ55 1244 aa15.8■□□□□ 0.12
LIG1-202ENST00000427526 PDXDC1Q6P996 788 aa15.8■□□□□ 0.12
LIG1-202ENST00000427526 SAMD1Q6SPF0 538 aaPredicted RBP15.8■□□□□ 0.12
LIG1-202ENST00000427526 ADGRF4Q8IZF3 695 aa15.8■□□□□ 0.12
LIG1-202ENST00000427526 SELENOOQ9BVL4 669 aa15.8■□□□□ 0.12
LIG1-202ENST00000427526 AKR1B10O60218 316 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 TNNT3P45378 269 aaPredicted RBP15.79■□□□□ 0.12
LIG1-202ENST00000427526 HDLBPQ00341 1268 aaKnown RBP15.79■□□□□ 0.12
LIG1-202ENST00000427526 SEPT2Q15019 361 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 CCDC155Q8N6L0 562 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 OSBPL9Q96SU4 736 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 DEF6Q9H4E7 631 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 AGPSO00116 658 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 TNNI2P48788 182 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 UBE2SQ16763 222 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 HYIQ5T013 277 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 GSPT2Q8IYD1 628 aaKnown RBP15.79■□□□□ 0.12
LIG1-202ENST00000427526 MYOCDQ8IZQ8 938 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 SPATA4Q8NEY3 305 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 AENQ8WTP8 325 aaKnown RBP15.79■□□□□ 0.12
LIG1-202ENST00000427526 SERPINA10Q9UK55 444 aa15.79■□□□□ 0.12
LIG1-202ENST00000427526 SSU72P8A0A1W2PR75 194 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 RBAK-RBAKDNI3L0D1 243 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 MAGEA1P43355 309 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 COASYQ13057 564 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 LEKR1Q6ZMV7 388 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 PRMT6Q96LA8 375 aaPredicted RBP15.78■□□□□ 0.12
LIG1-202ENST00000427526 TSG101Q99816 390 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 IDI2Q9BXS1 227 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 EHD4Q9H223 541 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 CWC15Q9P013 229 aaKnown RBP15.78■□□□□ 0.12
LIG1-202ENST00000427526 DDX25Q9UHL0 483 aaKnown RBP15.78■□□□□ 0.12
LIG1-202ENST00000427526 RGPD3A6NKT7 1758 aaPredicted RBP15.78■□□□□ 0.12
LIG1-202ENST00000427526 RGPD4Q7Z3J3 1758 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 TCP1P17987 556 aaKnown RBP15.78■□□□□ 0.12
LIG1-202ENST00000427526 ERCC3P19447 782 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 FKBP3Q00688 224 aaKnown RBP15.78■□□□□ 0.12
LIG1-202ENST00000427526 HDAC7Q8WUI4 952 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 RUBCNQ92622 972 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 GDAP1L1Q96MZ0 367 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 LRRC1Q9BTT6 524 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 COL4A3BPQ9Y5P4 624 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 NOL4O94818 638 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 SLC16A2P36021 539 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 GFPT1Q06210 699 aaPredicted RBP15.78■□□□□ 0.12
LIG1-202ENST00000427526 CC2D2BQ6DHV5 1058 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 TTLL6Q8N841 843 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 GJA10Q969M2 543 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 MTMR8Q96EF0 704 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 PI4KBQ9UBF8 816 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 FAM184BQ9ULE4 1060 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 PCDHA2Q9Y5H9 948 aa15.78■□□□□ 0.12
LIG1-202ENST00000427526 MYO3BQ8WXR4 1341 aa15.77■□□□□ 0.12
LIG1-202ENST00000427526 GGCXP38435 758 aa15.77■□□□□ 0.12
LIG1-202ENST00000427526 NFRKBQ6P4R8 1299 aa15.77■□□□□ 0.12
LIG1-202ENST00000427526 KCTD1Q719H9 257 aa15.77■□□□□ 0.12
LIG1-202ENST00000427526 SYN2Q92777 582 aaPredicted RBP15.77■□□□□ 0.12
LIG1-202ENST00000427526 DRC1Q96MC2 740 aa15.77■□□□□ 0.12
LIG1-202ENST00000427526 ALS2CR12Q96Q35 445 aa15.77■□□□□ 0.12
LIG1-202ENST00000427526 DHX36Q9H2U1 1008 aaKnown RBP15.77■□□□□ 0.12
LIG1-202ENST00000427526 DMGDHQ9UI17 866 aaKnown RBP15.77■□□□□ 0.12
LIG1-202ENST00000427526 HYOU1Q9Y4L1 999 aa15.77■□□□□ 0.12
LIG1-202ENST00000427526 C10orf71Q711Q0 1435 aa15.77■□□□□ 0.12
LIG1-202ENST00000427526 RAD21O60216 631 aa15.77■□□□□ 0.11
LIG1-202ENST00000427526 RAD17O75943 681 aa15.77■□□□□ 0.11
LIG1-202ENST00000427526 DPEP1P16444 411 aa15.77■□□□□ 0.11
LIG1-202ENST00000427526 RNF10Q8N5U6 811 aaKnown RBP15.77■□□□□ 0.11
LIG1-202ENST00000427526 SUPT20HQ8NEM7 779 aa15.77■□□□□ 0.11
LIG1-202ENST00000427526 RIN2Q8WYP3 895 aaPredicted RBP15.77■□□□□ 0.11
LIG1-202ENST00000427526 CUL5Q93034 780 aa15.77■□□□□ 0.11
LIG1-202ENST00000427526 TRERF1Q96PN7 1200 aa15.77■□□□□ 0.11
LIG1-202ENST00000427526 TLR10Q9BXR5 811 aa15.77■□□□□ 0.11
LIG1-202ENST00000427526 PANK4Q9NVE7 773 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms