RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 OXER1Q8TDS5 423 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 C8orf76Q96K31 380 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 BCAS3Q9H6U6 928 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 PKD2L1Q9P0L9 805 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 MROH7Q68CQ1 1323 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 CEP290O15078 2479 aa28.61■■■□□ 2.17
HERPUD2-205ENST00000427455 ARVCFO00192 962 aa28.6■■■□□ 2.17
HERPUD2-205ENST00000427455 SEZ6LQ9BYH1 1024 aa28.6■■■□□ 2.17
HERPUD2-205ENST00000427455 AGO4Q9HCK5 861 aaKnown RBP28.6■■■□□ 2.17
HERPUD2-205ENST00000427455 PPFIA4O75335 1185 aa28.59■■■□□ 2.17
HERPUD2-205ENST00000427455 ARP10275 920 aa28.59■■■□□ 2.17
HERPUD2-205ENST00000427455 PSMC6P62333 389 aa28.59■■■□□ 2.17
HERPUD2-205ENST00000427455 ITGA7Q13683 1181 aa28.59■■■□□ 2.17
HERPUD2-205ENST00000427455 SLC43A3Q8NBI5 491 aa28.59■■■□□ 2.17
HERPUD2-205ENST00000427455 KIF3AQ9Y496 699 aa28.59■■■□□ 2.17
HERPUD2-205ENST00000427455 CDK7P50613 346 aa28.58■■■□□ 2.17
HERPUD2-205ENST00000427455 ANKRD33Q7Z3H0 272 aa28.58■■■□□ 2.17
HERPUD2-205ENST00000427455 DIS3L2Q8IYB7 885 aaKnown RBP28.58■■■□□ 2.17
HERPUD2-205ENST00000427455 SDF4Q9BRK5 362 aa28.58■■■□□ 2.17
HERPUD2-205ENST00000427455 GRIN2DO15399 1336 aa28.58■■■□□ 2.17
HERPUD2-205ENST00000427455 NFASCO94856 1347 aa28.58■■■□□ 2.17
HERPUD2-205ENST00000427455 EDIL3O43854 480 aa28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 PQBP1O60828 265 aaKnown RBP28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 F2P00734 622 aa28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 TLE2Q04725 743 aa28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 NR5A1Q13285 461 aa28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 SAFBQ15424 915 aaKnown RBP eCLIP28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 INF2Q27J81 1249 aa28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 PRR16Q569H4 304 aa28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 TNFRSF25Q93038 417 aa28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 LENG9Q96B70 501 aa28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 TOX2Q96NM4 488 aa28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 GPR20Q99678 358 aa28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 JPH1Q9HDC5 661 aaPredicted RBP28.57■■■□□ 2.16
HERPUD2-205ENST00000427455 ZNF286BP0CG31 522 aa28.56■■■□□ 2.16
HERPUD2-205ENST00000427455 SP4Q02446 784 aa28.56■■■□□ 2.16
HERPUD2-205ENST00000427455 ITGB3BPQ13352 177 aaPredicted RBP28.56■■■□□ 2.16
HERPUD2-205ENST00000427455 MOXD1Q6UVY6 613 aa28.56■■■□□ 2.16
HERPUD2-205ENST00000427455 PIK3AP1Q6ZUJ8 805 aa28.56■■■□□ 2.16
HERPUD2-205ENST00000427455 FBXO18Q8NFZ0 1043 aa28.56■■■□□ 2.16
HERPUD2-205ENST00000427455 KATNAL1Q9BW62 490 aa28.56■■■□□ 2.16
HERPUD2-205ENST00000427455 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.56■■■□□ 2.16
HERPUD2-205ENST00000427455 BTBD18B2RXH4 712 aa28.55■■■□□ 2.16
HERPUD2-205ENST00000427455 GUCY1B3Q02153 619 aa28.55■■■□□ 2.16
HERPUD2-205ENST00000427455 NEK8Q86SG6 692 aa28.55■■■□□ 2.16
HERPUD2-205ENST00000427455 KAT2BQ92831 832 aa28.55■■■□□ 2.16
HERPUD2-205ENST00000427455 ZNF577Q9BSK1 485 aa28.55■■■□□ 2.16
HERPUD2-205ENST00000427455 SLC9A2Q9UBY0 812 aa28.55■■■□□ 2.16
HERPUD2-205ENST00000427455 CYP3A7-CYP3A51PA0A087WV96 503 aa28.54■■■□□ 2.16
HERPUD2-205ENST00000427455 DCDC2CA8MYV0 355 aa28.54■■■□□ 2.16
HERPUD2-205ENST00000427455 H0YGN5 161 aa28.54■■■□□ 2.16
HERPUD2-205ENST00000427455 IPO5O00410 1097 aaKnown RBP28.54■■■□□ 2.16
HERPUD2-205ENST00000427455 LGALS2P05162 132 aa28.54■■■□□ 2.16
HERPUD2-205ENST00000427455 CYP3A7P24462 503 aa28.54■■■□□ 2.16
HERPUD2-205ENST00000427455 CUL4AQ13619 759 aa28.54■■■□□ 2.16
HERPUD2-205ENST00000427455 NBPF20Q3BBV1 942 aa28.54■■■□□ 2.16
HERPUD2-205ENST00000427455 PRPF38BQ5VTL8 546 aaKnown RBP28.54■■■□□ 2.16
HERPUD2-205ENST00000427455 TDP2O95551 362 aa28.53■■■□□ 2.16
HERPUD2-205ENST00000427455 CLTBP09497 229 aa28.53■■■□□ 2.16
HERPUD2-205ENST00000427455 Q4G0T1 1027 aa28.53■■■□□ 2.16
HERPUD2-205ENST00000427455 EARS2Q5JPH6 523 aaKnown RBP28.53■■■□□ 2.16
HERPUD2-205ENST00000427455 NFRKBQ6P4R8 1299 aa28.53■■■□□ 2.16
HERPUD2-205ENST00000427455 FAM126BQ8IXS8 530 aa28.53■■■□□ 2.16
HERPUD2-205ENST00000427455 MBOAT7Q96N66 472 aa28.53■■■□□ 2.16
HERPUD2-205ENST00000427455 PDLIM7Q9NR12 457 aa28.53■■■□□ 2.16
HERPUD2-205ENST00000427455 ZMYND8Q9ULU4 1186 aaPredicted RBP28.53■■■□□ 2.16
HERPUD2-205ENST00000427455 SMC3Q9UQE7 1217 aa28.53■■■□□ 2.16
HERPUD2-205ENST00000427455 TELO2Q9Y4R8 837 aa28.53■■■□□ 2.16
HERPUD2-205ENST00000427455 TLR3O15455 904 aaKnown RBP28.52■■■□□ 2.16
HERPUD2-205ENST00000427455 GCFC2P16383 781 aaKnown RBP28.52■■■□□ 2.16
HERPUD2-205ENST00000427455 GJB2P29033 226 aa28.52■■■□□ 2.16
HERPUD2-205ENST00000427455 PSEN2P49810 448 aa28.52■■■□□ 2.16
HERPUD2-205ENST00000427455 LETM2Q2VYF4 491 aa28.52■■■□□ 2.16
HERPUD2-205ENST00000427455 SEPT1Q8WYJ6 367 aa28.52■■■□□ 2.16
HERPUD2-205ENST00000427455 NAP1L4Q99733 375 aaKnown RBP28.52■■■□□ 2.16
HERPUD2-205ENST00000427455 C16orf70Q9BSU1 422 aa28.52■■■□□ 2.16
HERPUD2-205ENST00000427455 TBC1D22BQ9NU19 505 aa28.52■■■□□ 2.16
HERPUD2-205ENST00000427455 PRKAG2Q9UGJ0 569 aa28.52■■■□□ 2.16
HERPUD2-205ENST00000427455 FAM205CA6NFA0 338 aa28.51■■■□□ 2.15
HERPUD2-205ENST00000427455 HAS3O00219 553 aa28.51■■■□□ 2.15
HERPUD2-205ENST00000427455 TCF7P36402 384 aaPredicted RBP28.51■■■□□ 2.15
HERPUD2-205ENST00000427455 PTPN11Q06124 597 aaPredicted RBP28.51■■■□□ 2.15
HERPUD2-205ENST00000427455 FAAP100Q0VG06 881 aa28.51■■■□□ 2.15
HERPUD2-205ENST00000427455 MFSD10Q14728 455 aa28.51■■■□□ 2.15
HERPUD2-205ENST00000427455 FAM47CQ5HY64 1035 aa28.51■■■□□ 2.15
HERPUD2-205ENST00000427455 SNX21Q969T3 373 aa28.51■■■□□ 2.15
HERPUD2-205ENST00000427455 PRDM5Q9NQX1 630 aaPredicted RBP28.51■■■□□ 2.15
HERPUD2-205ENST00000427455 K7ELQ4 463 aaPredicted RBP28.5■■■□□ 2.15
HERPUD2-205ENST00000427455 MSH4O15457 936 aa28.5■■■□□ 2.15
HERPUD2-205ENST00000427455 DHX15O43143 795 aaKnown RBP28.5■■■□□ 2.15
HERPUD2-205ENST00000427455 SYN1P17600 705 aa28.5■■■□□ 2.15
HERPUD2-205ENST00000427455 CHMP4BP1P59074 171 aa28.5■■■□□ 2.15
HERPUD2-205ENST00000427455 KIAA0753Q2KHM9 967 aa28.5■■■□□ 2.15
HERPUD2-205ENST00000427455 PPP4R3AQ6IN85 833 aa28.5■■■□□ 2.15
HERPUD2-205ENST00000427455 FOXP1Q9H334 677 aaPredicted RBP28.5■■■□□ 2.15
HERPUD2-205ENST00000427455 DDX25Q9UHL0 483 aaKnown RBP28.5■■■□□ 2.15
HERPUD2-205ENST00000427455 ZNF215Q9UL58 517 aaPredicted RBP28.5■■■□□ 2.15
HERPUD2-205ENST00000427455 GSTTP1A0A1W2PQM5 241 aa28.49■■■□□ 2.15
HERPUD2-205ENST00000427455 H3BRB1 525 aa28.49■■■□□ 2.15
HERPUD2-205ENST00000427455 DDX39AO00148 427 aaKnown RBP28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms