RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 NOP56O00567 594 aaKnown RBP11.8□□□□□ -0.52
HDLBP-213ENST00000427007 SGSM2O43147 1006 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 TREHO43280 583 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 LGR5O75473 907 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 RSPH10BP0C881 870 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 SMIM10L2AP0DMW4 78 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 SMIM10L2BP0DMW5 78 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 SEMA3FQ13275 785 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 MAPK8IP2Q13387 824 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-213ENST00000427007 CYFIP1Q7L576 1253 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 SERINC5Q86VE9 423 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 MB21D2Q8IYB1 491 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-213ENST00000427007 MYOCDQ8IZQ8 938 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 DBF4BQ8NFT6 615 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 SMARCC2Q8TAQ2 1214 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 IGDCC4Q8TDY8 1250 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 RAD9AQ99638 391 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 RNPEPQ9H4A4 650 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 RAPGEFL1Q9UHV5 662 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 TELO2Q9Y4R8 837 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 RBM8AQ9Y5S9 174 aaKnown RBP11.8□□□□□ -0.52
HDLBP-213ENST00000427007 FRMPD4Q14CM0 1322 aa11.8□□□□□ -0.52
HDLBP-213ENST00000427007 LINC01553A4QN01 128 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 EFCAB14O75071 495 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 CTSHP09668 335 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 SP4Q02446 784 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 UTP14CQ5TAP6 766 aaKnown RBP11.79□□□□□ -0.52
HDLBP-213ENST00000427007 USP17L6PQ6QN14 398 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 TRIM50Q86XT4 487 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 ZNF654Q8IZM8 581 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 CMTR1Q8N1G2 835 aaKnown RBP11.79□□□□□ -0.52
HDLBP-213ENST00000427007 CTCFLQ8NI51 663 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-213ENST00000427007 MAP4K1Q92918 833 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 HLA-CQ95604 372 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 INPP4AQ96PE3 977 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-213ENST00000427007 TGS1Q96RS0 853 aaKnown RBP11.79□□□□□ -0.52
HDLBP-213ENST00000427007 GPR20Q99678 358 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 OSBPL7Q9BZF2 842 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 SUGCTQ9HAC7 445 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 LY9Q9HBG7 655 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 COG5Q9UP83 839 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 EMSYQ7Z589 1322 aa11.79□□□□□ -0.52
HDLBP-213ENST00000427007 TTC28Q96AY4 2481 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 SPATA31C2B4DYI2 1134 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 FIBPO43427 364 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 STAM2O75886 525 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 PLEKHA8P1O95397 391 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 AMHP03971 560 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 RXRAP19793 462 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 HOXC8P31273 242 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 ICAM3P32942 547 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 ERVK-21P61565 698 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 NEDD9Q14511 834 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 PLEKHG4Q58EX7 1191 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 CASC1Q6TDU7 716 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 METTL7BQ6UX53 244 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 RAB11FIP4Q86YS3 637 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 CUL5Q93034 780 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 RRP36Q96EU6 259 aaKnown RBP11.78□□□□□ -0.52
HDLBP-213ENST00000427007 C17orf80Q9BSJ5 609 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 USP26Q9BXU7 913 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 SETD4Q9NVD3 440 aa11.78□□□□□ -0.52
HDLBP-213ENST00000427007 SEC63Q9UGP8 760 aaKnown RBP11.78□□□□□ -0.52
HDLBP-213ENST00000427007 NLRC5Q86WI3 1866 aa11.77□□□□□ -0.53
HDLBP-213ENST00000427007 MEIS2O14770 477 aa11.77□□□□□ -0.53
HDLBP-213ENST00000427007 PRC1O43663 620 aa11.77□□□□□ -0.53
HDLBP-213ENST00000427007 DDAH1O94760 285 aa11.77□□□□□ -0.53
HDLBP-213ENST00000427007 UPP2O95045 317 aa11.77□□□□□ -0.53
HDLBP-213ENST00000427007 KIF5BP33176 963 aa11.77□□□□□ -0.53
HDLBP-213ENST00000427007 MKRN4PQ13434 485 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-213ENST00000427007 COL9A3Q14050 684 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-213ENST00000427007 NFXL1Q6ZNB6 911 aa11.77□□□□□ -0.53
HDLBP-213ENST00000427007 SPZ1Q9BXG8 430 aa11.77□□□□□ -0.53
HDLBP-213ENST00000427007 INSL6Q9Y581 213 aa11.77□□□□□ -0.53
HDLBP-213ENST00000427007 hCG_1642624A0A1W2PR95 340 aa11.76□□□□□ -0.53
HDLBP-213ENST00000427007 CCDC69A6NI79 296 aa11.76□□□□□ -0.53
HDLBP-213ENST00000427007 ARHGAP4P98171 946 aa11.76□□□□□ -0.53
HDLBP-213ENST00000427007 PCNX4Q63HM2 1172 aa11.76□□□□□ -0.53
HDLBP-213ENST00000427007 NLRX1Q86UT6 975 aa11.76□□□□□ -0.53
HDLBP-213ENST00000427007 SRBD1Q8N5C6 995 aaKnown RBP11.76□□□□□ -0.53
HDLBP-213ENST00000427007 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
HDLBP-213ENST00000427007 LMBR1Q8WVP7 490 aa11.76□□□□□ -0.53
HDLBP-213ENST00000427007 SEPT8Q92599 483 aa11.76□□□□□ -0.53
HDLBP-213ENST00000427007 MAP3K14Q99558 947 aa11.76□□□□□ -0.53
HDLBP-213ENST00000427007 LMCD1Q9NZU5 365 aa11.76□□□□□ -0.53
HDLBP-213ENST00000427007 PKD2L1Q9P0L9 805 aa11.76□□□□□ -0.53
HDLBP-213ENST00000427007 ZNF215Q9UL58 517 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-213ENST00000427007 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-213ENST00000427007 PIK3CDO00329 1044 aa11.75□□□□□ -0.53
HDLBP-213ENST00000427007 SH2B2O14492 632 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-213ENST00000427007 ATP9AO75110 1047 aa11.75□□□□□ -0.53
HDLBP-213ENST00000427007 GNAT1P11488 350 aa11.75□□□□□ -0.53
HDLBP-213ENST00000427007 MCM5P33992 734 aa11.75□□□□□ -0.53
HDLBP-213ENST00000427007 TCF7P36402 384 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-213ENST00000427007 HTRA4P83105 476 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-213ENST00000427007 UBE2SQ16763 222 aa11.75□□□□□ -0.53
HDLBP-213ENST00000427007 CCDC82Q8N4S0 544 aa11.75□□□□□ -0.53
HDLBP-213ENST00000427007 YME1L1Q96TA2 773 aa11.75□□□□□ -0.53
HDLBP-213ENST00000427007 SENP7Q9BQF6 1050 aa11.75□□□□□ -0.53
HDLBP-213ENST00000427007 LRRC2Q9BYS8 371 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms