RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 MTMR4Q9NYA4 1195 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 ZNF609O15014 1411 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 TNS2Q63HR2 1409 aa15.17■□□□□ 0.02
RPL28-202ENST00000426763 CCNE1P24864 410 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 NSFP46459 744 aaKnown RBP15.16■□□□□ 0.02
RPL28-202ENST00000426763 ANGEL2Q5VTE6 544 aaKnown RBP15.16■□□□□ 0.02
RPL28-202ENST00000426763 AGBL3Q8NEM8 1001 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 LPAR1Q92633 364 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 PCDHB4Q9Y5E5 795 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 H2AFZP0C0S5 128 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 H2AFVQ71UI9 128 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 DAAM2Q86T65 1068 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 IFT20Q8IY31 132 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 EEF2KMTQ96G04 330 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 ARHGEF37A1IGU5 675 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 C19orf81C9J6K1 198 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 MTMR2Q13614 643 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 DPCR1Q3MIW9 517 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 PPP1R21Q6ZMI0 780 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 ARFGAP2Q8N6H7 521 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 MCPH1Q8NEM0 835 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 MTFR1LQ9H019 292 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 RAB20Q9NX57 234 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 K7ERI5 159 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 SFNP31947 248 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 RNASELQ05823 741 aaKnown RBP15.16■□□□□ 0.02
RPL28-202ENST00000426763 MXD3Q9BW11 206 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 MYOZ2Q9NPC6 264 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 GJB4Q9NTQ9 266 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 GGA3Q9NZ52 723 aa15.16■□□□□ 0.02
RPL28-202ENST00000426763 FEZ2Q9UHY8 353 aaPredicted RBP15.16■□□□□ 0.02
RPL28-202ENST00000426763 WDR46O15213 610 aaKnown RBP15.15■□□□□ 0.02
RPL28-202ENST00000426763 SRGAP2CP0DJJ0 459 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 PTPREP23469 700 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 KRT81Q14533 505 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 SLFN12LQ6IEE8 588 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 ATP6V0A4Q9HBG4 840 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 ABL1P00519 1130 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 TFAMQ00059 246 aaKnown RBP15.15■□□□□ 0.02
RPL28-202ENST00000426763 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 CCDC105Q8IYK2 499 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
RPL28-202ENST00000426763 NYAP2Q9P242 653 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 COBLO75128 1261 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 KMT5BQ4FZB7 885 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 RESP18Q5W5W9 173 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 SCYL2Q6P3W7 929 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 ZBTB33Q86T24 672 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 NLRP4Q96MN2 994 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 PSMB7Q99436 277 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 TMEM260Q9NX78 707 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 PHLPP2Q6ZVD8 1323 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 ATP5DP30049 168 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 LDHDQ86WU2 507 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 SPZ1Q9BXG8 430 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 SNX25Q9H3E2 840 aa15.15■□□□□ 0.02
RPL28-202ENST00000426763 RFX1P22670 979 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 COG2Q14746 738 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 C16orf86Q6ZW13 317 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 FAM49AQ9H0Q0 323 aaPredicted RBP15.14■□□□□ 0.01
RPL28-202ENST00000426763 MYCP01106 439 aaPredicted RBP15.14■□□□□ 0.01
RPL28-202ENST00000426763 LMNB1P20700 586 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 HDLBPQ00341 1268 aaKnown RBP15.14■□□□□ 0.01
RPL28-202ENST00000426763 KLHL7Q8IXQ5 586 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 THAP9Q9H5L6 903 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 TGFB2P61812 414 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 TRIM50Q86XT4 487 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 CCDC89Q8N998 374 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 OXER1Q8TDS5 423 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 ZFP91Q96JP5 570 aaPredicted RBP15.14■□□□□ 0.01
RPL28-202ENST00000426763 CCDC94Q9BW85 323 aaPredicted RBP15.14■□□□□ 0.01
RPL28-202ENST00000426763 ASB14A6NK59 587 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 LRRC63Q05C16 580 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 IFRD2Q12894 506 aaPredicted RBP15.14■□□□□ 0.01
RPL28-202ENST00000426763 LONRF2Q1L5Z9 754 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 ZNF280CQ8ND82 737 aa15.14■□□□□ 0.01
RPL28-202ENST00000426763 MROH1Q8NDA8 1641 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 POTEMA6NI47 508 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 IVLP07476 585 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 PEX3P56589 373 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 UAP1Q16222 522 aaPredicted RBP15.13■□□□□ 0.01
RPL28-202ENST00000426763 MFSD14CQ5VZR4 134 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 HDXQ7Z353 690 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 ENOX1Q8TC92 643 aaKnown RBP15.13■□□□□ 0.01
RPL28-202ENST00000426763 PPP1R16BQ96T49 567 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 CARD6Q9BX69 1037 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 RPF1Q9H9Y2 349 aaKnown RBP15.13■□□□□ 0.01
RPL28-202ENST00000426763 GPR75-ASB3A0A0A6YYF3 556 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 MYO1EQ12965 1108 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 PIGOQ8TEQ8 1089 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 TRIM31Q9BZY9 425 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 HAUS4Q9H6D7 363 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 POLR1AO95602 1720 aaPredicted RBP15.13■□□□□ 0.01
RPL28-202ENST00000426763 USP11P51784 963 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 STOX1Q6ZVD7 989 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 PDZD4Q76G19 769 aaPredicted RBP15.13■□□□□ 0.01
RPL28-202ENST00000426763 STAG2Q8N3U4 1231 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 KCNK9Q9NPC2 374 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 RNF8O76064 485 aa15.13■□□□□ 0.01
RPL28-202ENST00000426763 EXOSC10Q01780 885 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms