RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CABP7Q86V35 215 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 CEP57L1Q8IYX8 460 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 CNNM3Q8NE01 707 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 MORC4Q8TE76 937 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 SYMPKQ92797 1274 aaKnown RBP11.62□□□□□ -0.55
MDC1-205ENST00000425072 CDK5RAP3Q96JB5 506 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 SENP7Q9BQF6 1050 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 TEKT3Q9BXF9 490 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 PANK2Q9BZ23 570 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 LRRC27Q9C0I9 530 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 NT5C3AQ9H0P0 336 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 NUP62CLQ9H1M0 184 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 TNMDQ9H2S6 317 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 CUEDC2Q9H467 287 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 AGO4Q9HCK5 861 aaKnown RBP11.62□□□□□ -0.55
MDC1-205ENST00000425072 TNPO2O14787 897 aaKnown RBP11.61□□□□□ -0.55
MDC1-205ENST00000425072 SLFN14P0C7P3 912 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 HOXD10P28358 340 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 SFNP31947 248 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 AMPD3Q01432 767 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 KRT76Q01546 638 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 SP3Q02447 781 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 MAP2K5Q13163 448 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 PPP2R5CQ13362 524 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 NEDD9Q14511 834 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 HAUS3Q68CZ6 603 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 RDM1Q8NG50 284 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 IL31RAQ8NI17 732 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 SOCS4Q8WXH5 440 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 BEGAINQ9BUH8 593 aa11.61□□□□□ -0.55
MDC1-205ENST00000425072 NFASCO94856 1347 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 DKC1O60832 514 aaKnown RBP eCLIP11.6□□□□□ -0.55
MDC1-205ENST00000425072 COBLO75128 1261 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 TRPA1O75762 1119 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 GNRH1P01148 92 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 HOXC6P09630 235 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 RPA1P27694 616 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 RGS2P41220 211 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 IRF5Q13568 498 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 EPHA7Q15375 998 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 LONRF3Q496Y0 759 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 MORN1Q5T089 497 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 KRBA2Q6ZNG9 492 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 SEPT14Q6ZU15 432 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 USP49Q70CQ1 688 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 PDILTQ8N807 584 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 NEK9Q8TD19 979 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 ZFP91Q96JP5 570 aaPredicted RBP11.6□□□□□ -0.55
MDC1-205ENST00000425072 POLR3CQ9BUI4 534 aaPredicted RBP11.6□□□□□ -0.55
MDC1-205ENST00000425072 R3HDMLQ9H3Y0 253 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 ABHD16BQ9H3Z7 469 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 GOLPH3LQ9H4A5 285 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 CLSTN2Q9H4D0 955 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 MAGEF1Q9HAY2 307 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 VTA1Q9NP79 307 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 RNF186Q9NXI6 227 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 KDM3AQ9Y4C1 1321 aa11.6□□□□□ -0.55
MDC1-205ENST00000425072 DOCK3Q8IZD9 2030 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 DHX15O43143 795 aaKnown RBP11.59□□□□□ -0.55
MDC1-205ENST00000425072 TBC1D8O95759 1140 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 MYL1P05976 194 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 XRCC6P12956 609 aaKnown RBP eCLIP11.59□□□□□ -0.55
MDC1-205ENST00000425072 XRCC5P13010 732 aaKnown RBP11.59□□□□□ -0.55
MDC1-205ENST00000425072 CDC25AP30304 524 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 CCT6AP40227 531 aaKnown RBP11.59□□□□□ -0.55
MDC1-205ENST00000425072 STAT6P42226 847 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 PSMC4P43686 418 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 LACTBP83111 547 aaPredicted RBP11.59□□□□□ -0.55
MDC1-205ENST00000425072 MAP2K1Q02750 393 aaPredicted RBP11.59□□□□□ -0.55
MDC1-205ENST00000425072 TTLL4Q14679 1199 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 ZRSR1Q15695 479 aaKnown RBP11.59□□□□□ -0.55
MDC1-205ENST00000425072 IQSEC1Q6DN90 963 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 NCAPH2Q6IBW4 605 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 ZNF746Q6NUN9 644 aaPredicted RBP11.59□□□□□ -0.55
MDC1-205ENST00000425072 SMAP1Q8IYB5 467 aaPredicted RBP11.59□□□□□ -0.55
MDC1-205ENST00000425072 TRMT44Q8IYL2 757 aaKnown RBP11.59□□□□□ -0.55
MDC1-205ENST00000425072 SNX29Q8TEQ0 813 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 SCFD2Q8WU76 684 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 MAML3Q96JK9 1138 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 TINF2Q9BSI4 451 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 TUFT1Q9NNX1 390 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 DISC1Q9NRI5 854 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 BMP2KQ9NSY1 1161 aaPredicted RBP11.59□□□□□ -0.55
MDC1-205ENST00000425072 SAGE1Q9NXZ1 904 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 TMEM63CQ9P1W3 806 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 STK17AQ9UEE5 414 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 GJD2Q9UKL4 321 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 DNM3Q9UQ16 869 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 SYNGAP1Q96PV0 1343 aa11.59□□□□□ -0.55
MDC1-205ENST00000425072 KIAA1217Q5T5P2 1943 aa11.58□□□□□ -0.55
MDC1-205ENST00000425072 PLXNA1Q9UIW2 1896 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 WDR64B1ANS9 1081 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 ATP9AO75110 1047 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 RGS20O76081 388 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 SMC2O95347 1197 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 P4HBP07237 508 aaKnown RBP11.58□□□□□ -0.56
MDC1-205ENST00000425072 CTCFP49711 727 aaPredicted RBP11.58□□□□□ -0.56
MDC1-205ENST00000425072 JAK3P52333 1124 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 SEMA3FQ13275 785 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 KARSQ15046 597 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms