RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ABLIM1O14639 778 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 RFPL1O75677 317 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 TP53P04637 393 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-205ENST00000424674 INHBBP09529 407 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 VAV1P15498 845 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 SDHBP21912 280 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 VIPR1P32241 457 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 ARL4AP40617 200 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 PMS1P54277 932 aaKnown RBP4.5□□□□□ -1.69
SF3B1-205ENST00000424674 SRSF3P84103 164 aaKnown RBP4.5□□□□□ -1.69
SF3B1-205ENST00000424674 SSRP1Q08945 709 aaKnown RBP4.5□□□□□ -1.69
SF3B1-205ENST00000424674 LAPTM5Q13571 262 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 PUM3Q15397 648 aaKnown RBP4.5□□□□□ -1.69
SF3B1-205ENST00000424674 SLC4A8Q2Y0W8 1093 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 ZNF385BQ569K4 471 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 ZC3H12BQ5HYM0 836 aaKnown RBP4.5□□□□□ -1.69
SF3B1-205ENST00000424674 CXorf57Q6NSI4 855 aaKnown RBP4.5□□□□□ -1.69
SF3B1-205ENST00000424674 MMS22LQ6ZRQ5 1243 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 RNF180Q86T96 592 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 MORC1Q86VD1 984 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 PPFIBP1Q86W92 1011 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 AFAP1L2Q8N4X5 818 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 ST13P5Q8NFI4 369 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-205ENST00000424674 GPR101Q96P66 508 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-205ENST00000424674 ST7Q9NRC1 585 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 SIRT5Q9NXA8 310 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 KCTD3Q9Y597 815 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 A0A087X0B3 334 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 ANO9A1A5B4 782 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 IRS4O14654 1257 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 DHX16O60231 1041 aaKnown RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 KATNA1O75449 491 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 RFPL3O75679 317 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 MPOP05164 745 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 PHKG2P15735 406 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 SARSP49591 514 aaKnown RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 CEBPAP49715 358 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 EIF6P56537 245 aaKnown RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 YBX1P67809 324 aaKnown RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 ITKQ08881 620 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 PDE1CQ14123 709 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 SSPNQ14714 243 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 KIR3DS1Q14943 382 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 KRT72Q14CN4 511 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 CDC37Q16543 378 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 CCDC93Q567U6 631 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 FAM133BQ5BKY9 247 aaKnown RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 TCERG1LQ5VWI1 586 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 DCAF15Q66K64 600 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 CWF19L1Q69YN2 538 aaKnown RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 LILRA6Q6PI73 481 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 IFNL2Q8IZJ0 200 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 NAT16Q8N8M0 369 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 NUP43Q8NFH3 380 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 SKA1Q96BD8 255 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 HOOK2Q96ED9 719 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 MPP4Q96JB8 637 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 SIGLEC10Q96LC7 697 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 STRBPQ96SI9 672 aaKnown RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 TSPAN18Q96SJ8 248 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 SMAD5Q99717 465 aaKnown RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 ELAC2Q9BQ52 826 aaKnown RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 SARGQ9BW04 601 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 CLIC5Q9NZA1 410 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 EVLQ9UI08 416 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-205ENST00000424674 ZNF180Q9UJW8 692 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 PCDHB10Q9UN67 800 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 SPEF1Q9Y4P9 236 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 IRAK3Q9Y616 596 aa4.49□□□□□ -1.69
SF3B1-205ENST00000424674 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 H0Y8X5 98 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 N4BP3O15049 544 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 RPN1P04843 607 aaKnown RBP4.48□□□□□ -1.69
SF3B1-205ENST00000424674 SRGNP10124 158 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 PRKCAP17252 672 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 PI3P19957 117 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 GUCY2CP25092 1073 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 POLD1P28340 1107 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 HALP42357 657 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 NEK3P51956 506 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 TERF1P54274 439 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 EPHB3P54753 998 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 CYP4F8P98187 520 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 TMEM62Q0P6H9 643 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 BIRC3Q13489 604 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 PPP2R5EQ16537 467 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 LONRF2Q1L5Z9 754 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 RTP2Q5QGT7 225 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 UNC5AQ6ZN44 842 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 LSRQ86X29 649 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-205ENST00000424674 TMEM151BQ8IW70 566 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 RBBP8NLQ8NC74 664 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-205ENST00000424674 NGDNQ8NEJ9 315 aaKnown RBP4.48□□□□□ -1.69
SF3B1-205ENST00000424674 PJA1Q8NG27 643 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 MTMR8Q96EF0 704 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 CRBNQ96SW2 442 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 RTFDC1Q9BY42 306 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-205ENST00000424674 CNTD2Q9H8S5 307 aa4.48□□□□□ -1.69
SF3B1-205ENST00000424674 TNFRSF12AQ9NP84 129 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms