RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 C17orf102A2RUQ5 167 aa18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 ZNF213O14771 459 aa18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 GGPS1O95749 300 aa18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 PARP1P09874 1014 aaKnown RBP18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 THPOP40225 353 aa18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 GPM6BQ13491 265 aa18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 CTC1Q2NKJ3 1217 aa18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 DIEXFQ68CQ4 756 aaKnown RBP18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 TMEM192Q8IY95 271 aa18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 ENAHQ8N8S7 591 aaPredicted RBP18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 ZSCAN10Q96SZ4 725 aaPredicted RBP18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 YME1L1Q96TA2 773 aa18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 RWDD3Q9Y3V2 267 aa18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 KAT6AQ92794 2004 aa18.11■□□□□ 0.49
RPUSD3-204ENST00000424438 H3BRB1 525 aa18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 STAM2O75886 525 aa18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 CFBP00751 764 aa18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 GNAT1P11488 350 aa18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 UBA1P22314 1058 aaKnown RBP18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 TCEAL5Q5H9L2 206 aa18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 FAM26DQ5JW98 314 aa18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 ANKRD45Q5TZF3 282 aa18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 ATP6V0A1Q93050 837 aa18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 PRRX2Q99811 253 aa18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 USP26Q9BXU7 913 aa18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 TUT1Q9H6E5 874 aaKnown RBP18.1■□□□□ 0.49
RPUSD3-204ENST00000424438 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.09■□□□□ 0.49
RPUSD3-204ENST00000424438 KDM4AO75164 1064 aa18.09■□□□□ 0.49
RPUSD3-204ENST00000424438 HDAC1Q13547 482 aaPredicted RBP18.09■□□□□ 0.49
RPUSD3-204ENST00000424438 PGM5Q15124 567 aa18.09■□□□□ 0.49
RPUSD3-204ENST00000424438 RPAINQ86UA6 219 aa18.09■□□□□ 0.49
RPUSD3-204ENST00000424438 PHOX2BQ99453 314 aa18.09■□□□□ 0.49
RPUSD3-204ENST00000424438 POP1Q99575 1024 aaKnown RBP18.09■□□□□ 0.49
RPUSD3-204ENST00000424438 ZKSCAN3Q9BRR0 538 aa18.09■□□□□ 0.49
RPUSD3-204ENST00000424438 TTC3P53804 2025 aa18.09■□□□□ 0.49
RPUSD3-204ENST00000424438 TECTAO75443 2155 aa18.08■□□□□ 0.49
RPUSD3-204ENST00000424438 TRIOO75962 3097 aa18.08■□□□□ 0.49
RPUSD3-204ENST00000424438 FRMPD4Q14CM0 1322 aa18.08■□□□□ 0.49
RPUSD3-204ENST00000424438 ZBTB5O15062 677 aa18.08■□□□□ 0.48
RPUSD3-204ENST00000424438 SMIM10L2AP0DMW4 78 aa18.08■□□□□ 0.48
RPUSD3-204ENST00000424438 SMIM10L2BP0DMW5 78 aa18.08■□□□□ 0.48
RPUSD3-204ENST00000424438 CCND2P30279 289 aa18.08■□□□□ 0.48
RPUSD3-204ENST00000424438 ICAM3P32942 547 aa18.08■□□□□ 0.48
RPUSD3-204ENST00000424438 ADAM17P78536 824 aa18.08■□□□□ 0.48
RPUSD3-204ENST00000424438 SP2Q02086 613 aa18.08■□□□□ 0.48
RPUSD3-204ENST00000424438 SMAD2Q15796 467 aaKnown RBP18.08■□□□□ 0.48
RPUSD3-204ENST00000424438 RNPEPQ9H4A4 650 aa18.08■□□□□ 0.48
RPUSD3-204ENST00000424438 CNNM2Q9H8M5 875 aa18.08■□□□□ 0.48
RPUSD3-204ENST00000424438 LGALS2P05162 132 aa18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 PKN1Q16512 942 aa18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 GNPTABQ3T906 1256 aa18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 HERC4Q5GLZ8 1057 aaPredicted RBP18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 METTL7BQ6UX53 244 aa18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 CLP1Q92989 425 aaKnown RBP18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 INPP4AQ96PE3 977 aaPredicted RBP18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 C11orf84Q9BUA3 381 aaPredicted RBP18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 DSCC1Q9BVC3 393 aa18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 IFIH1Q9BYX4 1025 aaKnown RBP18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 KRT23Q9C075 422 aa18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 MLXIPQ9HAP2 919 aa18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 RC3H2Q9HBD1 1191 aaKnown RBP18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 ZSWIM5Q9P217 1185 aa18.07■□□□□ 0.48
RPUSD3-204ENST00000424438 TREHO43280 583 aa18.06■□□□□ 0.48
RPUSD3-204ENST00000424438 DHX16O60231 1041 aaKnown RBP18.06■□□□□ 0.48
RPUSD3-204ENST00000424438 LINC00271P0C7V0 271 aa18.06■□□□□ 0.48
RPUSD3-204ENST00000424438 MYCLP12524 364 aaPredicted RBP18.06■□□□□ 0.48
RPUSD3-204ENST00000424438 LTBRP36941 435 aa18.06■□□□□ 0.48
RPUSD3-204ENST00000424438 NEDD9Q14511 834 aa18.06■□□□□ 0.48
RPUSD3-204ENST00000424438 BMP8AQ7Z5Y6 402 aa18.06■□□□□ 0.48
RPUSD3-204ENST00000424438 FIBCD1Q8N539 461 aa18.06■□□□□ 0.48
RPUSD3-204ENST00000424438 IL17RAQ96F46 866 aa18.06■□□□□ 0.48
RPUSD3-204ENST00000424438 PCDHA1Q9Y5I3 950 aa18.06■□□□□ 0.48
RPUSD3-204ENST00000424438 CACNA1HO95180 2353 aa18.06■□□□□ 0.48
RPUSD3-204ENST00000424438 ZFHX2Q9C0A1 2572 aaPredicted RBP18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 B4E1Z4 1266 aa18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 KLRF2D3W0D1 207 aa18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 PPP1R11O60927 126 aaPredicted RBP18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 SDSP20132 328 aa18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 IRS1P35568 1242 aa18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 BMPR1AP36894 532 aa18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 SUGP1Q8IWZ8 645 aaKnown RBP18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 PRSS33Q8NF86 280 aa18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 IL31RAQ8NI17 732 aa18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 SENP7Q9BQF6 1050 aa18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 PLVAPQ9BX97 442 aa18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 OSBPL3Q9H4L5 887 aa18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 CLDND1Q9NY35 253 aa18.05■□□□□ 0.48
RPUSD3-204ENST00000424438 BAZ2BQ9UIF8 2168 aaKnown RBP18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 PALM3A6NDB9 673 aaPredicted RBP18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 TRIM6-TRIM34B2RNG4 842 aa18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 GCOM1H8Y6P7 765 aaPredicted RBP18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 GFRA3O60609 400 aa18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 POLR2MP0CAP2 368 aa18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 SMAD4Q13485 552 aaKnown RBP18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 SEC23AQ15436 765 aa18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 IMMTQ16891 758 aaKnown RBP18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 FAM43BQ6ZT52 329 aaPredicted RBP18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 UBAC1Q9BSL1 405 aa18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 RIOX1Q9H6W3 641 aa18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 EHMT1Q9H9B1 1298 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms