RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 CCSER1Q9C0I3 900 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 NDST4Q9H3R1 872 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 SALL4Q9UJQ4 1053 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 PCDHA12Q9UN75 941 aa13.02□□□□□ -0.33
ERCC1-204ENST00000423698 ARAP2Q8WZ64 1704 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 PPEF1O14829 653 aaPredicted RBP13.01□□□□□ -0.33
ERCC1-204ENST00000423698 ZBTB39O15060 712 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 GSCP56915 257 aaPredicted RBP13.01□□□□□ -0.33
ERCC1-204ENST00000423698 SEPT2Q15019 361 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 TMEM266Q2M3C6 531 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 SH3GLB2Q9NR46 395 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 ARHGAP20Q9P2F6 1191 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 CAPN11Q9UMQ6 739 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 PCDHA1Q9Y5I3 950 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 MYH10P35580 1976 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 FTCDO95954 541 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 SRGNP10124 158 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 SLC1A4P43007 532 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 POLR2FP61218 127 aaKnown RBP13.01□□□□□ -0.33
ERCC1-204ENST00000423698 ACTN3Q08043 901 aaPredicted RBP13.01□□□□□ -0.33
ERCC1-204ENST00000423698 KIF5AQ12840 1032 aa13.01□□□□□ -0.33
ERCC1-204ENST00000423698 PDS5AQ29RF7 1337 aaKnown RBP13.01□□□□□ -0.33
ERCC1-204ENST00000423698 DDTLA6NHG4 134 aaPredicted RBP13□□□□□ -0.33
ERCC1-204ENST00000423698 EBAG9O00559 213 aa13□□□□□ -0.33
ERCC1-204ENST00000423698 PPP4CP60510 307 aa13□□□□□ -0.33
ERCC1-204ENST00000423698 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
ERCC1-204ENST00000423698 CDC42EP5Q6NZY7 148 aa13□□□□□ -0.33
ERCC1-204ENST00000423698 SPZ1Q9BXG8 430 aa13□□□□□ -0.33
ERCC1-204ENST00000423698 ZEB2O60315 1214 aa13□□□□□ -0.33
ERCC1-204ENST00000423698 ATP2B4P23634 1241 aa13□□□□□ -0.33
ERCC1-204ENST00000423698 EEF1GP26641 437 aaKnown RBP13□□□□□ -0.33
ERCC1-204ENST00000423698 RAPGEF1Q13905 1077 aa13□□□□□ -0.33
ERCC1-204ENST00000423698 DCAF17Q5H9S7 520 aaPredicted RBP13□□□□□ -0.33
ERCC1-204ENST00000423698 THAP9Q9H5L6 903 aa13□□□□□ -0.33
ERCC1-204ENST00000423698 ZSCAN5CA6NGD5 496 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-204ENST00000423698 CLIC2O15247 247 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 KRT86O43790 486 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 EEF2P13639 858 aaKnown RBP12.99□□□□□ -0.33
ERCC1-204ENST00000423698 INPP5BP32019 993 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 ATP1A2P50993 1020 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 CASP5P51878 434 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 SF3A3Q12874 501 aaKnown RBP eCLIP12.99□□□□□ -0.33
ERCC1-204ENST00000423698 CNNM4Q6P4Q7 775 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 GPBP1Q86WP2 473 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 OTUD6BQ8N6M0 293 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 HAS1Q92839 578 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 PANK4Q9NVE7 773 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 TNRC6CQ9HCJ0 1690 aaKnown RBP12.99□□□□□ -0.33
ERCC1-204ENST00000423698 CLRN2A0PK11 232 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 RSPH10B2B2RC85 870 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 RSPH10BP0C881 870 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 CYLC1P35663 651 aaPredicted RBP12.99□□□□□ -0.33
ERCC1-204ENST00000423698 EPS15P42566 896 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 AMPD3Q01432 767 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 KCNA1Q09470 495 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 MAP9Q49MG5 647 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 KCTD16Q68DU8 428 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 PIGOQ8TEQ8 1089 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 PACSIN1Q9BY11 444 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 ITIH6Q6UXX5 1313 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 TMCO5BA8MYB1 307 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 TTLL1O95922 423 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 KIF11P52732 1056 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 QRICH1Q2TAL8 776 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 VWA3BQ502W6 1294 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 RDH13Q8NBN7 331 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 TBC1D5Q92609 795 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 CCDC51Q96ER9 411 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 P2RX7Q99572 595 aaKnown RBP12.99□□□□□ -0.33
ERCC1-204ENST00000423698 DNAJC7Q99615 494 aa12.99□□□□□ -0.33
ERCC1-204ENST00000423698 LSM14BQ9BX40 385 aaKnown RBP12.99□□□□□ -0.33
ERCC1-204ENST00000423698 TDRD3Q9H7E2 651 aaKnown RBP12.99□□□□□ -0.33
ERCC1-204ENST00000423698 BICDL2A1A5D9 508 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 DDX39AO00148 427 aaKnown RBP12.98□□□□□ -0.33
ERCC1-204ENST00000423698 CHRNA5P30532 468 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 SHMT1P34896 483 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 GBP6Q6ZN66 633 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 SUGP1Q8IWZ8 645 aaKnown RBP12.98□□□□□ -0.33
ERCC1-204ENST00000423698 PROM2Q8N271 834 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 FAM133AQ8N9E0 248 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 DHTKD1Q96HY7 919 aaPredicted RBP12.98□□□□□ -0.33
ERCC1-204ENST00000423698 RGL1Q9NZL6 768 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 SKAP2O75563 359 aaPredicted RBP12.98□□□□□ -0.33
ERCC1-204ENST00000423698 PRPF6O94906 941 aaKnown RBP12.98□□□□□ -0.33
ERCC1-204ENST00000423698 MAGEA1P43355 309 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 GNGT1P63211 74 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 COASYQ13057 564 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 KCNB1Q14721 858 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 GJB7Q6PEY0 223 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 CEP57Q86XR8 500 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 GIMAP7Q8NHV1 300 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 RAD54LQ92698 747 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 ELMO3Q96BJ8 720 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 PYM1Q9BRP8 204 aaKnown RBP12.98□□□□□ -0.33
ERCC1-204ENST00000423698 ADAMTS1Q9UHI8 967 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 HYOU1Q9Y4L1 999 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 PCDHA13Q9Y5I0 950 aa12.98□□□□□ -0.33
ERCC1-204ENST00000423698 IRAK1P51617 712 aa12.97□□□□□ -0.33
ERCC1-204ENST00000423698 ZBED6P86452 979 aa12.97□□□□□ -0.33
ERCC1-204ENST00000423698 ZNF543Q08ER8 600 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms