RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ZMYND12Q9H0C1 365 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 PRO3102Q9H379 93 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 UPF2Q9HAU5 1272 aaKnown RBP12.51□□□□□ -0.41
USP49-204ENST00000423567 NOD1Q9Y239 953 aa12.51□□□□□ -0.41
USP49-204ENST00000423567 MAFGO15525 162 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 TIMP1P01033 207 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 ZNF76P36508 570 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 AK2P54819 239 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 SP2Q02086 613 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 PTPN11Q06124 597 aaPredicted RBP12.5□□□□□ -0.41
USP49-204ENST00000423567 MTMR1Q13613 665 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 NBPF20Q3BBV1 942 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 C8orf34Q49A92 452 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 JAKMIP3Q5VZ66 844 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 NFRKBQ6P4R8 1299 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 METTL7BQ6UX53 244 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 CYFIP1Q7L576 1253 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 TDHQ8IZJ6 230 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 IL17RAQ96F46 866 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 PGBD1Q96JS3 809 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 SENP7Q9BQF6 1050 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 SH3GLB2Q9NR46 395 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 TBX21Q9UL17 535 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 TPCN1Q9ULQ1 816 aa12.5□□□□□ -0.41
USP49-204ENST00000423567 GRIN2DO15399 1336 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 RIOK3O14730 519 aaKnown RBP12.49□□□□□ -0.41
USP49-204ENST00000423567 PFKFB2O60825 505 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 CD4P01730 458 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 XBP1P17861 261 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 NLRP5P59047 1200 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 FPGSQ05932 587 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 FAM177A1Q8N128 213 aaPredicted RBP12.49□□□□□ -0.41
USP49-204ENST00000423567 TMEM199Q8N511 208 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 C7orf31Q8N865 590 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 MXRA8Q9BRK3 442 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 PPP1R12CQ9BZL4 782 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 TRPV6Q9H1D0 765 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 OCEL1Q9H607 264 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 JADE2Q9NQC1 790 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 TMEM260Q9NX78 707 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 VPS54Q9P1Q0 977 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 UBIAD1Q9Y5Z9 338 aa12.49□□□□□ -0.41
USP49-204ENST00000423567 B4GALT4O60513 344 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 ZNF286BP0CG31 522 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 HOXD8P13378 290 aaPredicted RBP12.48□□□□□ -0.41
USP49-204ENST00000423567 ITGB5P18084 799 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 SREBF1P36956 1147 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 CLK2P49760 499 aaKnown RBP12.48□□□□□ -0.41
USP49-204ENST00000423567 PSEN2P49810 448 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 ARHGAP4P98171 946 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 SP4Q02446 784 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 SCRN1Q12765 414 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 PPIGQ13427 754 aaKnown RBP eCLIP12.48□□□□□ -0.41
USP49-204ENST00000423567 MFSD10Q14728 455 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 KIAA0753Q2KHM9 967 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 HSDL1Q3SXM5 330 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 CEP55Q53EZ4 464 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 MFSD5Q6N075 450 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 WASF1Q92558 559 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 ALG1Q9BT22 464 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 C22orf23Q9BZE7 217 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 HIPK3Q9H422 1215 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 TRMT13Q9NUP7 481 aaKnown RBP12.48□□□□□ -0.41
USP49-204ENST00000423567 PKD2L1Q9P0L9 805 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 PCDH10Q9P2E7 1040 aa12.48□□□□□ -0.41
USP49-204ENST00000423567 F2P00734 622 aa12.47□□□□□ -0.41
USP49-204ENST00000423567 ITGB8P26012 769 aa12.47□□□□□ -0.41
USP49-204ENST00000423567 SEMA3FQ13275 785 aa12.47□□□□□ -0.41
USP49-204ENST00000423567 GALNT17Q6IS24 598 aa12.47□□□□□ -0.41
USP49-204ENST00000423567 CCDC155Q8N6L0 562 aa12.47□□□□□ -0.41
USP49-204ENST00000423567 KAT2BQ92831 832 aa12.47□□□□□ -0.41
USP49-204ENST00000423567 SDF4Q9BRK5 362 aa12.47□□□□□ -0.41
USP49-204ENST00000423567 SCUBE2Q9NQ36 999 aa12.47□□□□□ -0.41
USP49-204ENST00000423567 KCNH7Q9NS40 1196 aa12.47□□□□□ -0.41
USP49-204ENST00000423567 ZNF215Q9UL58 517 aaPredicted RBP12.47□□□□□ -0.41
USP49-204ENST00000423567 KIAA1217Q5T5P2 1943 aa12.47□□□□□ -0.41
USP49-204ENST00000423567 STK36Q9NRP7 1315 aa12.46□□□□□ -0.41
USP49-204ENST00000423567 H3BRB1 525 aa12.46□□□□□ -0.41
USP49-204ENST00000423567 LGALS2P05162 132 aa12.46□□□□□ -0.41
USP49-204ENST00000423567 KCNA2P16389 499 aa12.46□□□□□ -0.41
USP49-204ENST00000423567 SETQ01105 290 aaPredicted RBP12.46□□□□□ -0.41
USP49-204ENST00000423567 BFSP2Q13515 415 aa12.46□□□□□ -0.41
USP49-204ENST00000423567 PTGISQ16647 500 aa12.46□□□□□ -0.41
USP49-204ENST00000423567 UTP14CQ5TAP6 766 aaKnown RBP12.46□□□□□ -0.41
USP49-204ENST00000423567 SESTD1Q86VW0 696 aa12.46□□□□□ -0.41
USP49-204ENST00000423567 RETREG2Q8NC44 543 aa12.46□□□□□ -0.41
USP49-204ENST00000423567 GTF3C6Q969F1 213 aa12.46□□□□□ -0.41
USP49-204ENST00000423567 GPR20Q99678 358 aa12.46□□□□□ -0.41
USP49-204ENST00000423567 NOC4LQ9BVI4 516 aaKnown RBP12.46□□□□□ -0.41
USP49-204ENST00000423567 TUT1Q9H6E5 874 aaKnown RBP12.46□□□□□ -0.41
USP49-204ENST00000423567 JPH1Q9HDC5 661 aaPredicted RBP12.46□□□□□ -0.41
USP49-204ENST00000423567 PCDHA4Q9UN74 947 aa12.46□□□□□ -0.41
USP49-204ENST00000423567 MEIS1O00470 390 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 ATP9AO75110 1047 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 CYP3A4P08684 503 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 CYP2C9P11712 490 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 CYP2C18P33260 490 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 FXR1P51114 621 aaKnown RBP eCLIP12.45□□□□□ -0.42
USP49-204ENST00000423567 ME3Q16798 604 aa12.45□□□□□ -0.42
USP49-204ENST00000423567 NIPA1Q7RTP0 329 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms