RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 NUCB2P80303 420 aa19.24■□□□□ 0.67
COL7A1-202ENST00000422991 CELF3Q5SZQ8 465 aaKnown RBP19.24■□□□□ 0.67
COL7A1-202ENST00000422991 GIMAP8Q8ND71 665 aaPredicted RBP19.24■□□□□ 0.67
COL7A1-202ENST00000422991 DEFB118Q96PH6 123 aa19.24■□□□□ 0.67
COL7A1-202ENST00000422991 UIMC1Q96RL1 719 aa19.24■□□□□ 0.67
COL7A1-202ENST00000422991 BCAS3Q9H6U6 928 aa19.24■□□□□ 0.67
COL7A1-202ENST00000422991 XPNPEP3Q9NQH7 507 aa19.24■□□□□ 0.67
COL7A1-202ENST00000422991 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.24■□□□□ 0.67
COL7A1-202ENST00000422991 DHX15O43143 795 aaKnown RBP19.23■□□□□ 0.67
COL7A1-202ENST00000422991 FARP2O94887 1054 aaPredicted RBP19.23■□□□□ 0.67
COL7A1-202ENST00000422991 GJB1P08034 283 aa19.23■□□□□ 0.67
COL7A1-202ENST00000422991 GJA9P57773 515 aa19.23■□□□□ 0.67
COL7A1-202ENST00000422991 METTL7BQ6UX53 244 aa19.23■□□□□ 0.67
COL7A1-202ENST00000422991 CYFIP1Q7L576 1253 aa19.23■□□□□ 0.67
COL7A1-202ENST00000422991 DHX37Q8IY37 1157 aaKnown RBP19.23■□□□□ 0.67
COL7A1-202ENST00000422991 OR6J1Q8NGC5 347 aa19.23■□□□□ 0.67
COL7A1-202ENST00000422991 HAS1Q92839 578 aa19.23■□□□□ 0.67
COL7A1-202ENST00000422991 FAM20AQ96MK3 541 aa19.23■□□□□ 0.67
COL7A1-202ENST00000422991 SDF4Q9BRK5 362 aa19.23■□□□□ 0.67
COL7A1-202ENST00000422991 TMEM60Q9H2L4 133 aa19.23■□□□□ 0.67
COL7A1-202ENST00000422991 CTAGE5O15320 804 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 DYNC1LI2O43237 492 aaPredicted RBP19.22■□□□□ 0.67
COL7A1-202ENST00000422991 SORBS3O60504 671 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 ADAMTS4O75173 837 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 PGK1P00558 417 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 NKX3-2P78367 333 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 LAMC2Q13753 1193 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 CALCRLQ16602 461 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 LRCH2Q5VUJ6 765 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 C4orf32Q8N8J7 132 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 GJA10Q969M2 543 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 MTMR9Q96QG7 549 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 RIT2Q99578 217 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 CRISPLD2Q9H0B8 497 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 AP5M1Q9H0R1 490 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 MLXIPQ9HAP2 919 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 JPH1Q9HDC5 661 aaPredicted RBP19.22■□□□□ 0.67
COL7A1-202ENST00000422991 TBC1D22BQ9NU19 505 aa19.22■□□□□ 0.67
COL7A1-202ENST00000422991 GAS7O60861 476 aa19.21■□□□□ 0.67
COL7A1-202ENST00000422991 PSMD10O75832 226 aa19.21■□□□□ 0.67
COL7A1-202ENST00000422991 OR52Z1P0C646 297 aa19.21■□□□□ 0.67
COL7A1-202ENST00000422991 PDE4DIPQ5VU43 2346 aa19.21■□□□□ 0.67
COL7A1-202ENST00000422991 PPTC7Q8NI37 304 aa19.21■□□□□ 0.67
COL7A1-202ENST00000422991 U2AF1L4Q8WU68 220 aaKnown RBP19.21■□□□□ 0.67
COL7A1-202ENST00000422991 FTOQ9C0B1 505 aaKnown RBP eCLIP19.21■□□□□ 0.67
COL7A1-202ENST00000422991 SPC25Q9HBM1 224 aa19.21■□□□□ 0.67
COL7A1-202ENST00000422991 SLC9A2Q9UBY0 812 aa19.21■□□□□ 0.67
COL7A1-202ENST00000422991 OGDHLQ9ULD0 1010 aa19.21■□□□□ 0.67
COL7A1-202ENST00000422991 WDR81Q562E7 1941 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 MYADML2A6NDP7 307 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 BAG4O95429 457 aaKnown RBP19.2■□□□□ 0.66
COL7A1-202ENST00000422991 SGPL1O95470 568 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 C6orf222P0C671 652 aaPredicted RBP19.2■□□□□ 0.66
COL7A1-202ENST00000422991 CST5P28325 142 aaPredicted RBP19.2■□□□□ 0.66
COL7A1-202ENST00000422991 GJA8P48165 433 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 IRX5P78411 483 aaPredicted RBP19.2■□□□□ 0.66
COL7A1-202ENST00000422991 PTGDRQ13258 359 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 FSCN1Q16658 493 aaKnown RBP19.2■□□□□ 0.66
COL7A1-202ENST00000422991 SLFN12Q8IYM2 578 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 AFG1LQ8WV93 481 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 SPATA33Q96N06 139 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 ZNF396Q96N95 335 aaPredicted RBP19.2■□□□□ 0.66
COL7A1-202ENST00000422991 USP28Q96RU2 1077 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 TEKT3Q9BXF9 490 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 VAV3Q9UKW4 847 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 TELO2Q9Y4R8 837 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 CLIC4Q9Y696 253 aa19.2■□□□□ 0.66
COL7A1-202ENST00000422991 A6NJR5 290 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 DDX39AO00148 427 aaKnown RBP19.19■□□□□ 0.66
COL7A1-202ENST00000422991 LAD1O00515 517 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 BMP15O95972 392 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 CCNE2O96020 404 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 MMP3P08254 477 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 HOXD8P13378 290 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-202ENST00000422991 CPT1AP50416 773 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 ATP2C1P98194 919 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-202ENST00000422991 KRT76Q01546 638 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 LRRC41Q15345 812 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 SF3A1Q15459 793 aaKnown RBP19.19■□□□□ 0.66
COL7A1-202ENST00000422991 HSDL1Q3SXM5 330 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 FOXD4L6Q3SYB3 417 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-202ENST00000422991 FOXD4L3Q6VB84 417 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-202ENST00000422991 KLHDC9Q8NEP7 349 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 GPR20Q99678 358 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 CHMP5Q9NZZ3 219 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 ELP1O95163 1332 aa19.19■□□□□ 0.66
COL7A1-202ENST00000422991 MARCH6O60337 910 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 PRPHP41219 470 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 BEX3Q00994 111 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 SP4Q02446 784 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 PTPAQ15257 358 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 ZNF746Q6NUN9 644 aaPredicted RBP19.18■□□□□ 0.66
COL7A1-202ENST00000422991 B3GNT9Q6UX72 402 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 RNF180Q86T96 592 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 UNC45AQ9H3U1 944 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 POLR3EQ9NVU0 708 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 TCEAL9Q9UHQ7 104 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 CEP131Q9UPN4 1083 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 ATP6V1DQ9Y5K8 247 aa19.18■□□□□ 0.66
COL7A1-202ENST00000422991 NOP56O00567 594 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms