RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PLA2G2DQ9UNK4 145 aa7.06□□□□□ -1.28
SFXN1-202ENST00000421887 PNPLA7Q6ZV29 1317 aa7.05□□□□□ -1.28
SFXN1-202ENST00000421887 USP6P35125 1406 aa7.05□□□□□ -1.28
SFXN1-202ENST00000421887 NOBOXO60393 691 aa7.05□□□□□ -1.28
SFXN1-202ENST00000421887 ATF2P15336 505 aa7.05□□□□□ -1.28
SFXN1-202ENST00000421887 ENDOUP21128 410 aaKnown RBP7.05□□□□□ -1.28
SFXN1-202ENST00000421887 JMYQ8N9B5 988 aa7.05□□□□□ -1.28
SFXN1-202ENST00000421887 LNPKQ9C0E8 428 aa7.05□□□□□ -1.28
SFXN1-202ENST00000421887 AP5S1Q9NUS5 200 aa7.05□□□□□ -1.28
SFXN1-202ENST00000421887 CD2APQ9Y5K6 639 aa7.05□□□□□ -1.28
SFXN1-202ENST00000421887 TUBGCP6Q96RT7 1819 aa7.05□□□□□ -1.28
SFXN1-202ENST00000421887 POLR3AO14802 1390 aaPredicted RBP7.05□□□□□ -1.28
SFXN1-202ENST00000421887 PIK3C2AO00443 1686 aa7.04□□□□□ -1.28
SFXN1-202ENST00000421887 A0A1W2PQJ5 194 aa7.04□□□□□ -1.28
SFXN1-202ENST00000421887 SH3D21A4FU49 640 aa7.04□□□□□ -1.28
SFXN1-202ENST00000421887 C6P13671 934 aa7.04□□□□□ -1.28
SFXN1-202ENST00000421887 LMNB2Q03252 620 aa7.04□□□□□ -1.28
SFXN1-202ENST00000421887 ZNF512BQ96KM6 892 aaPredicted RBP7.04□□□□□ -1.28
SFXN1-202ENST00000421887 RBM15Q96T37 977 aaKnown RBP eCLIP7.04□□□□□ -1.28
SFXN1-202ENST00000421887 MENTQ9BUN1 341 aa7.04□□□□□ -1.28
SFXN1-202ENST00000421887 NOC4LQ9BVI4 516 aaKnown RBP7.04□□□□□ -1.28
SFXN1-202ENST00000421887 MRIQ9BWK5 157 aa7.04□□□□□ -1.28
SFXN1-202ENST00000421887 CDK19Q9BWU1 502 aa7.04□□□□□ -1.28
SFXN1-202ENST00000421887 CCDC7Q96M83 1385 aa7.04□□□□□ -1.28
SFXN1-202ENST00000421887 TNS2Q63HR2 1409 aa7.03□□□□□ -1.28
SFXN1-202ENST00000421887 TRPM1Q7Z4N2 1603 aa7.03□□□□□ -1.28
SFXN1-202ENST00000421887 PRPF40AO75400 957 aaKnown RBP7.03□□□□□ -1.28
SFXN1-202ENST00000421887 ZNF20P17024 532 aa7.03□□□□□ -1.28
SFXN1-202ENST00000421887 GDF5P43026 501 aa7.03□□□□□ -1.28
SFXN1-202ENST00000421887 MVKQ03426 396 aa7.03□□□□□ -1.28
SFXN1-202ENST00000421887 TAF1CQ15572 869 aaPredicted RBP7.03□□□□□ -1.28
SFXN1-202ENST00000421887 PAQR3Q6TCH7 311 aa7.03□□□□□ -1.28
SFXN1-202ENST00000421887 AEBP1Q8IUX7 1158 aa7.03□□□□□ -1.28
SFXN1-202ENST00000421887 CARFQ8N187 725 aa7.03□□□□□ -1.28
SFXN1-202ENST00000421887 C1QTNF3-AMACRE9PGA6 284 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 DBHP09172 617 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 HMGB2P26583 209 aaKnown RBP7.02□□□□□ -1.29
SFXN1-202ENST00000421887 MC3RP41968 323 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 HTRA3P83110 453 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 BICRALQ6AI39 1079 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 JAMLQ86YT9 394 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 ZFPM1Q8IX07 1006 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 NAT16Q8N8M0 369 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 TMEM52Q8NDY8 209 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 DUSP9Q99956 384 aaKnown RBP7.02□□□□□ -1.29
SFXN1-202ENST00000421887 GFOD1Q9NXC2 390 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 DBR1Q9UK59 544 aaKnown RBP7.02□□□□□ -1.29
SFXN1-202ENST00000421887 FBXL21Q9UKT6 434 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 COL18A1P39060 1754 aa7.02□□□□□ -1.29
SFXN1-202ENST00000421887 IGSF1Q8N6C5 1336 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 PPIP5K1Q6PFW1 1433 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 ABCC6O95255 1503 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 ADGRB1O14514 1584 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 F8W031 263 aaPredicted RBP7.01□□□□□ -1.29
SFXN1-202ENST00000421887 ZNF205O95201 554 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 CYBBP04839 570 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 VAV1P15498 845 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 FBLN1P23142 703 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 POLR2BP30876 1174 aaKnown RBP7.01□□□□□ -1.29
SFXN1-202ENST00000421887 BMP8BP34820 402 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 FSTL1Q12841 308 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 KCNH5Q8NCM2 988 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 CHST13Q8NET6 341 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 MPHOSPH9Q99550 1183 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 KRTAP3-1Q9BYR8 98 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 ANTXR1Q9H6X2 564 aa7.01□□□□□ -1.29
SFXN1-202ENST00000421887 CPSF1Q10570 1443 aaKnown RBP7.01□□□□□ -1.29
SFXN1-202ENST00000421887 HSPA1AP0DMV8 641 aaKnown RBP7□□□□□ -1.29
SFXN1-202ENST00000421887 HSPA1BP0DMV9 641 aaKnown RBP7□□□□□ -1.29
SFXN1-202ENST00000421887 NCAM1P13591 858 aa7□□□□□ -1.29
SFXN1-202ENST00000421887 IL2RBP14784 551 aa7□□□□□ -1.29
SFXN1-202ENST00000421887 CTSKP43235 329 aa7□□□□□ -1.29
SFXN1-202ENST00000421887 PRR5P85299 388 aa7□□□□□ -1.29
SFXN1-202ENST00000421887 FAM160A1Q05DH4 1040 aa7□□□□□ -1.29
SFXN1-202ENST00000421887 DLX2Q07687 328 aaPredicted RBP7□□□□□ -1.29
SFXN1-202ENST00000421887 COL23A1Q86Y22 540 aaPredicted RBP7□□□□□ -1.29
SFXN1-202ENST00000421887 SAMD11Q96NU1 681 aa7□□□□□ -1.29
SFXN1-202ENST00000421887 C1QTNF3Q9BXJ4 246 aa7□□□□□ -1.29
SFXN1-202ENST00000421887 CCNL1Q9UK58 526 aaPredicted RBP7□□□□□ -1.29
SFXN1-202ENST00000421887 LY75O60449 1722 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 CLEC3AO75596 197 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 SLPIP03973 132 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 TACR2P21452 398 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 GBP2P32456 591 aaPredicted RBP6.99□□□□□ -1.29
SFXN1-202ENST00000421887 RAD51AP2Q09MP3 1159 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 TRIM26Q12899 539 aaPredicted RBP6.99□□□□□ -1.29
SFXN1-202ENST00000421887 SNAP47Q5SQN1 464 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 CRTC3Q6UUV7 619 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 REC114Q7Z4M0 266 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 FBXO27Q8NI29 283 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 MKRN2Q9H000 416 aaKnown RBP6.99□□□□□ -1.29
SFXN1-202ENST00000421887 RNF38Q9H0F5 515 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 NMRK2Q9NPI5 230 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 SLIT3O75094 1523 aa6.99□□□□□ -1.29
SFXN1-202ENST00000421887 QRICH2Q9H0J4 1663 aa6.98□□□□□ -1.29
SFXN1-202ENST00000421887 SARSP49591 514 aaKnown RBP6.98□□□□□ -1.29
SFXN1-202ENST00000421887 MPP2Q14168 576 aa6.98□□□□□ -1.29
SFXN1-202ENST00000421887 HLA-DQA1Q5Y7H0 255 aa6.98□□□□□ -1.29
SFXN1-202ENST00000421887 SPRED1Q7Z699 444 aa6.98□□□□□ -1.29
SFXN1-202ENST00000421887 ARHGEF25Q86VW2 580 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms