RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 PGBD1Q96JS3 809 aa28.62■■■□□ 2.17
SNAPC3-203ENST00000421710 MXRA8Q9BRK3 442 aa28.62■■■□□ 2.17
SNAPC3-203ENST00000421710 LARP6Q9BRS8 491 aaKnown RBP28.62■■■□□ 2.17
SNAPC3-203ENST00000421710 ALG1Q9BT22 464 aa28.62■■■□□ 2.17
SNAPC3-203ENST00000421710 SLKQ9H2G2 1235 aaPredicted RBP28.62■■■□□ 2.17
SNAPC3-203ENST00000421710 GTF2IRD1Q9UHL9 959 aa28.62■■■□□ 2.17
SNAPC3-203ENST00000421710 LGALS2P05162 132 aa28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 CYP2C9P11712 490 aa28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 KCNA2P16389 499 aa28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 EPHB4P54760 987 aa28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 BFSP2Q13515 415 aa28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 CEP55Q53EZ4 464 aa28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 JAKMIP3Q5VZ66 844 aa28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 FAM177A1Q8N128 213 aaPredicted RBP28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 RNPC3Q96LT9 517 aaKnown RBP28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 GPR20Q99678 358 aa28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 C16orf70Q9BSU1 422 aa28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 TMEM260Q9NX78 707 aa28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 ZNF215Q9UL58 517 aaPredicted RBP28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 DOCK5Q9H7D0 1870 aa28.61■■■□□ 2.17
SNAPC3-203ENST00000421710 PITPNM1O00562 1244 aa28.6■■■□□ 2.17
SNAPC3-203ENST00000421710 LRCH3Q96II8 777 aa28.6■■■□□ 2.17
SNAPC3-203ENST00000421710 IL23AQ9NPF7 189 aa28.6■■■□□ 2.17
SNAPC3-203ENST00000421710 HDAC6Q9UBN7 1215 aa28.6■■■□□ 2.17
SNAPC3-203ENST00000421710 UMODL1Q5DID0 1318 aa28.6■■■□□ 2.17
SNAPC3-203ENST00000421710 H3BRB1 525 aa28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 PPFIA3O75145 1194 aa28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 ZNF76P36508 570 aa28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 AK2P54819 239 aa28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 ARHGAP4P98171 946 aa28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 GDF6Q6KF10 455 aaPredicted RBP28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 RETREG2Q8NC44 543 aa28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 CAGE1Q8TC20 777 aa28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 PPP1R13LQ8WUF5 828 aa28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 TUT1Q9H6E5 874 aaKnown RBP28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 BCAS3Q9H6U6 928 aa28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 KCNH7Q9NS40 1196 aa28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 VPS54Q9P1Q0 977 aa28.59■■■□□ 2.17
SNAPC3-203ENST00000421710 PFKFB2O60825 505 aa28.58■■■□□ 2.17
SNAPC3-203ENST00000421710 ATP9AO75110 1047 aa28.58■■■□□ 2.17
SNAPC3-203ENST00000421710 SEC24BO95487 1268 aa28.58■■■□□ 2.17
SNAPC3-203ENST00000421710 CCL23P55773 120 aa28.58■■■□□ 2.17
SNAPC3-203ENST00000421710 NIPA1Q7RTP0 329 aa28.58■■■□□ 2.17
SNAPC3-203ENST00000421710 RPUSD2Q8IZ73 545 aaKnown RBP28.58■■■□□ 2.17
SNAPC3-203ENST00000421710 WNT8AQ9H1J5 351 aa28.58■■■□□ 2.17
SNAPC3-203ENST00000421710 TPCN1Q9ULQ1 816 aa28.58■■■□□ 2.17
SNAPC3-203ENST00000421710 NLRP5P59047 1200 aa28.57■■■□□ 2.16
SNAPC3-203ENST00000421710 SP4Q02446 784 aa28.57■■■□□ 2.16
SNAPC3-203ENST00000421710 SCRN1Q12765 414 aa28.57■■■□□ 2.16
SNAPC3-203ENST00000421710 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.57■■■□□ 2.162e-8■■□□□ 12.9
SNAPC3-203ENST00000421710 SDF4Q9BRK5 362 aa28.57■■■□□ 2.16
SNAPC3-203ENST00000421710 MTIF3Q9H2K0 278 aaKnown RBP28.57■■■□□ 2.16
SNAPC3-203ENST00000421710 PFKMP08237 780 aa28.56■■■□□ 2.16
SNAPC3-203ENST00000421710 CYP3A4P08684 503 aa28.56■■■□□ 2.16
SNAPC3-203ENST00000421710 RFC2P35250 354 aa28.56■■■□□ 2.16
SNAPC3-203ENST00000421710 TMEM240Q5SV17 173 aa28.56■■■□□ 2.16
SNAPC3-203ENST00000421710 SEPT1Q8WYJ6 367 aa28.56■■■□□ 2.16
SNAPC3-203ENST00000421710 JPH1Q9HDC5 661 aaPredicted RBP28.56■■■□□ 2.16
SNAPC3-203ENST00000421710 PKD2L1Q9P0L9 805 aa28.56■■■□□ 2.16
SNAPC3-203ENST00000421710 NFASCO94856 1347 aa28.55■■■□□ 2.16
SNAPC3-203ENST00000421710 STK36Q9NRP7 1315 aa28.55■■■□□ 2.16
SNAPC3-203ENST00000421710 MEIS1O00470 390 aa28.55■■■□□ 2.16
SNAPC3-203ENST00000421710 NEK4P51957 841 aa28.55■■■□□ 2.16
SNAPC3-203ENST00000421710 C8orf34Q49A92 452 aa28.55■■■□□ 2.16
SNAPC3-203ENST00000421710 AFAP1L1Q8TED9 768 aa28.55■■■□□ 2.16
SNAPC3-203ENST00000421710 C22orf23Q9BZE7 217 aa28.55■■■□□ 2.16
SNAPC3-203ENST00000421710 TANC1Q9C0D5 1861 aa28.55■■■□□ 2.16
SNAPC3-203ENST00000421710 SZT2Q5T011 3432 aa28.55■■■□□ 2.16
SNAPC3-203ENST00000421710 TCF7P36402 384 aaPredicted RBP28.54■■■□□ 2.16
SNAPC3-203ENST00000421710 SETQ01105 290 aaPredicted RBP28.54■■■□□ 2.16
SNAPC3-203ENST00000421710 PTK7Q13308 1070 aa28.54■■■□□ 2.16
SNAPC3-203ENST00000421710 UTP14CQ5TAP6 766 aaKnown RBP28.54■■■□□ 2.16
SNAPC3-203ENST00000421710 GALNT17Q6IS24 598 aa28.54■■■□□ 2.16
SNAPC3-203ENST00000421710 C16orf59Q7L2K0 433 aa28.54■■■□□ 2.16
SNAPC3-203ENST00000421710 CYP2W1Q8TAV3 490 aa28.54■■■□□ 2.16
SNAPC3-203ENST00000421710 CRYGNQ8WXF5 182 aa28.54■■■□□ 2.16
SNAPC3-203ENST00000421710 SLC9A2Q9UBY0 812 aa28.54■■■□□ 2.16
SNAPC3-203ENST00000421710 C17orf102A2RUQ5 167 aa28.53■■■□□ 2.16
SNAPC3-203ENST00000421710 FGBP02675 491 aa28.53■■■□□ 2.16
SNAPC3-203ENST00000421710 ACRP10323 421 aa28.53■■■□□ 2.16
SNAPC3-203ENST00000421710 GNAT1P11488 350 aa28.53■■■□□ 2.16
SNAPC3-203ENST00000421710 XBP1P17861 261 aa28.53■■■□□ 2.16
SNAPC3-203ENST00000421710 SMAD3P84022 425 aaKnown RBP28.53■■■□□ 2.16
SNAPC3-203ENST00000421710 ZNF365Q70YC5 407 aa28.53■■■□□ 2.16
SNAPC3-203ENST00000421710 SCLYQ96I15 445 aa28.53■■■□□ 2.16
SNAPC3-203ENST00000421710 AGO4Q9HCK5 861 aaKnown RBP28.53■■■□□ 2.16
SNAPC3-203ENST00000421710 PCDHA4Q9UN74 947 aa28.53■■■□□ 2.16
SNAPC3-203ENST00000421710 PARNO95453 639 aaKnown RBP28.52■■■□□ 2.16
SNAPC3-203ENST00000421710 SMIM10L2AP0DMW4 78 aa28.52■■■□□ 2.16
SNAPC3-203ENST00000421710 SMIM10L2BP0DMW5 78 aa28.52■■■□□ 2.16
SNAPC3-203ENST00000421710 ARP10275 920 aa28.52■■■□□ 2.16
SNAPC3-203ENST00000421710 RBL2Q08999 1139 aa28.52■■■□□ 2.16
SNAPC3-203ENST00000421710 PLA2G4DQ86XP0 818 aa28.52■■■□□ 2.16
SNAPC3-203ENST00000421710 CTAGE1Q96RT6 745 aa28.52■■■□□ 2.16
SNAPC3-203ENST00000421710 IQCF3P0C7M6 154 aa28.51■■■□□ 2.15
SNAPC3-203ENST00000421710 TRIM50Q86XT4 487 aa28.51■■■□□ 2.15
SNAPC3-203ENST00000421710 RASGRP4Q8TDF6 673 aa28.51■■■□□ 2.15
SNAPC3-203ENST00000421710 HERVK_113Q902F9 699 aa28.51■■■□□ 2.15
SNAPC3-203ENST00000421710 WASF1Q92558 559 aa28.51■■■□□ 2.15
SNAPC3-203ENST00000421710 ERAP1Q9NZ08 941 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms