RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 UBA5Q9GZZ9 404 aa8.81□□□□□ -1
AC012560.1-202ENST00000421324 VAT1LQ9HCJ6 419 aa8.81□□□□□ -1
AC012560.1-202ENST00000421324 NR2E3Q9Y5X4 410 aa8.81□□□□□ -1
AC012560.1-202ENST00000421324 RBBP6Q7Z6E9 1792 aaKnown RBP8.81□□□□□ -1
AC012560.1-202ENST00000421324 A0A0G2JMZ2 1700 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 CDC14CA4D256 554 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 A6NJR5 290 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 ASB14A6NK59 587 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 KLRF2D3W0D1 207 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 SLC27A2O14975 620 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 MCM5P33992 734 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 DBN1Q16643 649 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 MAMDC4Q6UXC1 1216 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 STOX1Q6ZVD7 989 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 CHST3Q7LGC8 479 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 CATIPQ7Z7H3 387 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 ADGRF4Q8IZF3 695 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 MTA3Q9BTC8 594 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 C11orf49Q9H6J7 331 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 A1CFQ9NQ94 594 aaKnown RBP8.8□□□□□ -1
AC012560.1-202ENST00000421324 FAM184BQ9ULE4 1060 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 TAF6LQ9Y6J9 622 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 WDR19Q8NEZ3 1342 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 SYNGAP1Q96PV0 1343 aa8.8□□□□□ -1
AC012560.1-202ENST00000421324 PTPDC1A2A3K4 754 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 TMEM229AB2RXF0 380 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 PRC1O43663 620 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 SNAI1O95863 264 aaPredicted RBP8.79□□□□□ -1
AC012560.1-202ENST00000421324 RARBP10826 455 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 AKR1A1P14550 325 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 GDF10P55107 478 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 CNTN2Q02246 1040 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 TRAF1Q13077 416 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 BAATQ14032 418 aaPredicted RBP8.79□□□□□ -1
AC012560.1-202ENST00000421324 USH1GQ495M9 461 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 MUM1L1Q5H9M0 696 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 NFXL1Q6ZNB6 911 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 RNF207Q6ZRF8 634 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 MB21D2Q8IYB1 491 aaPredicted RBP8.79□□□□□ -1
AC012560.1-202ENST00000421324 TRIM22Q8IYM9 498 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 FAM133AQ8N9E0 248 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 IGDCC4Q8TDY8 1250 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 DIS3LQ8TF46 1054 aaKnown RBP8.79□□□□□ -1
AC012560.1-202ENST00000421324 ZNF837Q96EG3 531 aaPredicted RBP8.79□□□□□ -1
AC012560.1-202ENST00000421324 TMEM87BQ96K49 555 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 CNTNAP3BQ96NU0 1288 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 MPHOSPH6Q99547 160 aaKnown RBP8.79□□□□□ -1
AC012560.1-202ENST00000421324 CNTNAP3Q9BZ76 1288 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 CPVLQ9H3G5 476 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 ABHD16BQ9H3Z7 469 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 CYP39A1Q9NYL5 469 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 ADD3Q9UEY8 706 aaKnown RBP8.79□□□□□ -1
AC012560.1-202ENST00000421324 PARP14Q460N5 1801 aa8.79□□□□□ -1
AC012560.1-202ENST00000421324 COL11A1P12107 1806 aaPredicted RBP8.78□□□□□ -1
AC012560.1-202ENST00000421324 PALM3A6NDB9 673 aaPredicted RBP8.78□□□□□ -1
AC012560.1-202ENST00000421324 CCDC69A6NI79 296 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 B4DLN1 442 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 KBTBD13C9JR72 458 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 REC8O95072 547 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 ZNF865P0CJ78 1059 aaPredicted RBP8.78□□□□□ -1
AC012560.1-202ENST00000421324 TAL1P17542 331 aaPredicted RBP8.78□□□□□ -1
AC012560.1-202ENST00000421324 CALML3P27482 149 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 KIF5BP33176 963 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 MRPL12P52815 198 aaKnown RBP8.78□□□□□ -1
AC012560.1-202ENST00000421324 ANTXR2P58335 489 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 ACVR2BQ13705 512 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 NCOA4Q13772 614 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 KRT32Q14532 448 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 GRM4Q14833 912 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 CDC37Q16543 378 aaPredicted RBP8.78□□□□□ -1
AC012560.1-202ENST00000421324 EML3Q32P44 896 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 ANO1Q5XXA6 986 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 SYNE3Q6ZMZ3 975 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 ARMCX2Q7L311 632 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 RNF180Q86T96 592 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 FBXO11Q86XK2 927 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 MCF2L2Q86YR7 1114 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 CCDC144CPQ8IYA2 1237 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 STAG2Q8N3U4 1231 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 RGS22Q8NE09 1264 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 CTCFLQ8NI51 663 aaPredicted RBP8.78□□□□□ -1
AC012560.1-202ENST00000421324 NUP133Q8WUM0 1156 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 NEK1Q96PY6 1258 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 AMNQ9BXJ7 453 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 SENP6Q9GZR1 1112 aaPredicted RBP8.78□□□□□ -1
AC012560.1-202ENST00000421324 MAF1Q9H063 256 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 JMJD4Q9H9V9 463 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 TIMMDC1Q9NPL8 285 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 XPNPEP3Q9NQH7 507 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 MAD2L2Q9UI95 211 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 ZHX1Q9UKY1 873 aaPredicted RBP8.78□□□□□ -1
AC012560.1-202ENST00000421324 MRPL11Q9Y3B7 192 aaKnown RBP8.78□□□□□ -1
AC012560.1-202ENST00000421324 ABCB11O95342 1321 aa8.78□□□□□ -1
AC012560.1-202ENST00000421324 LAMA4Q16363 1823 aa8.77□□□□□ -1
AC012560.1-202ENST00000421324 ZNF236Q9UL36 1845 aa8.77□□□□□ -1
AC012560.1-202ENST00000421324 PDE4DIPQ5VU43 2346 aa8.77□□□□□ -1
AC012560.1-202ENST00000421324 H0YGN5 161 aa8.77□□□□□ -1.01
AC012560.1-202ENST00000421324 DNM1LO00429 736 aa8.77□□□□□ -1.01
AC012560.1-202ENST00000421324 NFIBO00712 420 aa8.77□□□□□ -1.01
AC012560.1-202ENST00000421324 HMGB1P09429 215 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms