RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 ATXN2LQ8WWM7 1075 aaKnown RBP23.46■■□□□ 1.35
MCF2L-212ENST00000420013 CDHR1Q96JP9 859 aa23.46■■□□□ 1.35
MCF2L-212ENST00000420013 TUT1Q9H6E5 874 aaKnown RBP23.46■■□□□ 1.35
MCF2L-212ENST00000420013 ZNF215Q9UL58 517 aaPredicted RBP23.46■■□□□ 1.35
MCF2L-212ENST00000420013 SIP14410 1827 aa23.45■■□□□ 1.34
MCF2L-212ENST00000420013 C17orf102A2RUQ5 167 aa23.45■■□□□ 1.34
MCF2L-212ENST00000420013 NBNO60934 754 aa23.45■■□□□ 1.34
MCF2L-212ENST00000420013 GPNMBQ14956 572 aa23.45■■□□□ 1.34
MCF2L-212ENST00000420013 TMTC3Q6ZXV5 915 aa23.45■■□□□ 1.34
MCF2L-212ENST00000420013 TLL1O43897 1013 aa23.44■■□□□ 1.34
MCF2L-212ENST00000420013 SORBS3O60504 671 aa23.44■■□□□ 1.34
MCF2L-212ENST00000420013 POU3F3P20264 500 aaPredicted RBP23.44■■□□□ 1.34
MCF2L-212ENST00000420013 TRAF7Q6Q0C0 670 aa23.44■■□□□ 1.34
MCF2L-212ENST00000420013 USP17L6PQ6QN14 398 aa23.44■■□□□ 1.34
MCF2L-212ENST00000420013 GPRASP2Q96D09 838 aa23.44■■□□□ 1.34
MCF2L-212ENST00000420013 GTPBP6O43824 516 aaPredicted RBP23.43■■□□□ 1.34
MCF2L-212ENST00000420013 SMIM10L2AP0DMW4 78 aa23.43■■□□□ 1.34
MCF2L-212ENST00000420013 SMIM10L2BP0DMW5 78 aa23.43■■□□□ 1.34
MCF2L-212ENST00000420013 GNAT1P11488 350 aa23.43■■□□□ 1.34
MCF2L-212ENST00000420013 ZNF618Q5T7W0 954 aa23.43■■□□□ 1.34
MCF2L-212ENST00000420013 SYNE3Q6ZMZ3 975 aa23.43■■□□□ 1.34
MCF2L-212ENST00000420013 CYFIP1Q7L576 1253 aa23.43■■□□□ 1.34
MCF2L-212ENST00000420013 MICU3Q86XE3 530 aa23.43■■□□□ 1.34
MCF2L-212ENST00000420013 WNT8BQ93098 351 aa23.43■■□□□ 1.34
MCF2L-212ENST00000420013 ZFP91Q96JP5 570 aaPredicted RBP23.43■■□□□ 1.34
MCF2L-212ENST00000420013 GPR20Q99678 358 aa23.43■■□□□ 1.34
MCF2L-212ENST00000420013 TSPYL2Q9H2G4 693 aaPredicted RBP23.43■■□□□ 1.34
MCF2L-212ENST00000420013 RBM28Q9NW13 759 aaKnown RBP23.43■■□□□ 1.34
MCF2L-212ENST00000420013 COL4A6Q14031 1691 aa23.42■■□□□ 1.34
MCF2L-212ENST00000420013 RXRAP19793 462 aa23.42■■□□□ 1.34
MCF2L-212ENST00000420013 TAP1Q03518 808 aa23.42■■□□□ 1.34
MCF2L-212ENST00000420013 IKBKEQ14164 716 aa23.42■■□□□ 1.34
MCF2L-212ENST00000420013 APOA5Q6Q788 366 aa23.42■■□□□ 1.34
MCF2L-212ENST00000420013 FANCBQ8NB91 859 aa23.42■■□□□ 1.34
MCF2L-212ENST00000420013 PPM1EQ8WY54 764 aa23.42■■□□□ 1.34
MCF2L-212ENST00000420013 ATP6V0A1Q93050 837 aa23.42■■□□□ 1.34
MCF2L-212ENST00000420013 PSTPIP2Q9H939 334 aa23.42■■□□□ 1.34
MCF2L-212ENST00000420013 EHMT1Q9H9B1 1298 aa23.42■■□□□ 1.34
MCF2L-212ENST00000420013 PRRC2BQ5JSZ5 2229 aaKnown RBP23.41■■□□□ 1.34
MCF2L-212ENST00000420013 CNTNAP5Q8WYK1 1306 aa23.41■■□□□ 1.34
MCF2L-212ENST00000420013 LGR5O75473 907 aa23.41■■□□□ 1.34
MCF2L-212ENST00000420013 ZNF200P98182 395 aaPredicted RBP23.41■■□□□ 1.34
MCF2L-212ENST00000420013 HIC1Q14526 733 aa23.41■■□□□ 1.34
MCF2L-212ENST00000420013 PPP1R18Q6NYC8 613 aa23.41■■□□□ 1.34
MCF2L-212ENST00000420013 RTEL1Q9NZ71 1219 aa23.41■■□□□ 1.34
MCF2L-212ENST00000420013 SPDYE3A6NKU9 549 aa23.4■■□□□ 1.34
MCF2L-212ENST00000420013 hCG_1984214I3L0E3 225 aa23.4■■□□□ 1.34
MCF2L-212ENST00000420013 GJB5O95377 273 aa23.4■■□□□ 1.34
MCF2L-212ENST00000420013 DEFB103AP81534 67 aa23.4■■□□□ 1.34
MCF2L-212ENST00000420013 COL9A3Q14050 684 aaPredicted RBP23.4■■□□□ 1.34
MCF2L-212ENST00000420013 KRT32Q14532 448 aa23.4■■□□□ 1.34
MCF2L-212ENST00000420013 MBTPS1Q14703 1052 aa23.4■■□□□ 1.34
MCF2L-212ENST00000420013 ZNF713Q8N859 430 aaPredicted RBP23.4■■□□□ 1.34
MCF2L-212ENST00000420013 NEK1Q96PY6 1258 aa23.4■■□□□ 1.34
MCF2L-212ENST00000420013 LRRC2Q9BYS8 371 aa23.4■■□□□ 1.34
MCF2L-212ENST00000420013 REV3LO60673 3130 aa23.4■■□□□ 1.34
MCF2L-212ENST00000420013 RSPH10B2B2RC85 870 aa23.39■■□□□ 1.33
MCF2L-212ENST00000420013 CDC45O75419 566 aa23.39■■□□□ 1.33
MCF2L-212ENST00000420013 RSPH10BP0C881 870 aa23.39■■□□□ 1.33
MCF2L-212ENST00000420013 THPOP40225 353 aa23.39■■□□□ 1.33
MCF2L-212ENST00000420013 RCAN1P53805 252 aa23.39■■□□□ 1.33
MCF2L-212ENST00000420013 TSGA10IPQ3SY00 556 aa23.39■■□□□ 1.33
MCF2L-212ENST00000420013 CMTR1Q8N1G2 835 aaKnown RBP23.39■■□□□ 1.33
MCF2L-212ENST00000420013 ZBED2Q9BTP6 218 aa23.39■■□□□ 1.33
MCF2L-212ENST00000420013 RNPEPQ9H4A4 650 aa23.39■■□□□ 1.33
MCF2L-212ENST00000420013 PRDM6Q9NQX0 595 aa23.39■■□□□ 1.33
MCF2L-212ENST00000420013 KCNA2P16389 499 aa23.38■■□□□ 1.33
MCF2L-212ENST00000420013 MRPS5P82675 430 aaKnown RBP23.38■■□□□ 1.33
MCF2L-212ENST00000420013 TRIM50Q86XT4 487 aa23.38■■□□□ 1.33
MCF2L-212ENST00000420013 ARNTL2Q8WYA1 636 aa23.38■■□□□ 1.33
MCF2L-212ENST00000420013 ASB2Q96Q27 587 aa23.38■■□□□ 1.33
MCF2L-212ENST00000420013 RAD9AQ99638 391 aa23.38■■□□□ 1.33
MCF2L-212ENST00000420013 BCAS3Q9H6U6 928 aa23.38■■□□□ 1.33
MCF2L-212ENST00000420013 MTCH2Q9Y6C9 303 aa23.38■■□□□ 1.33
MCF2L-212ENST00000420013 NRCAMQ92823 1304 aa23.37■■□□□ 1.33
MCF2L-212ENST00000420013 NCOR1O75376 2440 aa23.37■■□□□ 1.33
MCF2L-212ENST00000420013 MAFGO15525 162 aa23.37■■□□□ 1.33
MCF2L-212ENST00000420013 TREHO43280 583 aa23.37■■□□□ 1.33
MCF2L-212ENST00000420013 ARHGEF15O94989 841 aa23.37■■□□□ 1.33
MCF2L-212ENST00000420013 MKRN4PQ13434 485 aaPredicted RBP23.37■■□□□ 1.33
MCF2L-212ENST00000420013 MTMR1Q13613 665 aa23.37■■□□□ 1.33
MCF2L-212ENST00000420013 CCDC85BQ15834 202 aaPredicted RBP23.37■■□□□ 1.33
MCF2L-212ENST00000420013 PLEKHG4Q58EX7 1191 aa23.37■■□□□ 1.33
MCF2L-212ENST00000420013 DHX32Q7L7V1 743 aaKnown RBP23.37■■□□□ 1.33
MCF2L-212ENST00000420013 HEATR3Q7Z4Q2 680 aa23.37■■□□□ 1.33
MCF2L-212ENST00000420013 RAB11FIP4Q86YS3 637 aa23.37■■□□□ 1.33
MCF2L-212ENST00000420013 UBIAD1Q9Y5Z9 338 aa23.37■■□□□ 1.33
MCF2L-212ENST00000420013 RALGAPA2Q2PPJ7 1873 aa23.36■■□□□ 1.33
MCF2L-212ENST00000420013 MUC3AQ02505 3323 aa23.36■■□□□ 1.33
MCF2L-212ENST00000420013 ZBTB43O43298 467 aa23.36■■□□□ 1.33
MCF2L-212ENST00000420013 HMGB1P09429 215 aaKnown RBP23.36■■□□□ 1.33
MCF2L-212ENST00000420013 TCF7P36402 384 aaPredicted RBP23.36■■□□□ 1.33
MCF2L-212ENST00000420013 ADAM17P78536 824 aa23.36■■□□□ 1.33
MCF2L-212ENST00000420013 UBE2SQ16763 222 aa23.36■■□□□ 1.33
MCF2L-212ENST00000420013 RTN1Q16799 776 aa23.36■■□□□ 1.33
MCF2L-212ENST00000420013 TCTN1Q2MV58 587 aa23.36■■□□□ 1.33
MCF2L-212ENST00000420013 MICALL1Q8N3F8 863 aa23.36■■□□□ 1.33
MCF2L-212ENST00000420013 IL27Q8NEV9 243 aa23.36■■□□□ 1.33
MCF2L-212ENST00000420013 NLRC5Q86WI3 1866 aa23.35■■□□□ 1.33
MCF2L-212ENST00000420013 EPOPA6NHQ4 379 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms