RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 KCNH6Q9H252 994 aa11.91□□□□□ -0.5
TNFAIP3-202ENST00000420009 RNF41Q9H4P4 317 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-202ENST00000420009 PRKAG3Q9UGI9 489 aa11.91□□□□□ -0.5
TNFAIP3-202ENST00000420009 MRPL11Q9Y3B7 192 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-202ENST00000420009 THPOP40225 353 aa11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 PDE1AP54750 535 aa11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 NMIQ13287 307 aaPredicted RBP11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 CSPP1Q1MSJ5 1256 aa11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 CELF3Q5SZQ8 465 aaKnown RBP11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 FBXO11Q86XK2 927 aa11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 TOP1MTQ969P6 601 aa11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 UIMC1Q96RL1 719 aa11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 YME1L1Q96TA2 773 aa11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 PDCD2LQ9BRP1 358 aa11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 NSUN3Q9H649 340 aaKnown RBP11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 JMJD4Q9H9V9 463 aa11.9□□□□□ -0.5
TNFAIP3-202ENST00000420009 C5orf42Q9H799 3197 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 CAND2O75155 1236 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 GGPS1O95749 300 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 CFBP00751 764 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 UBA1P22314 1058 aaKnown RBP11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 GPM6BQ13491 265 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 KCNV1Q6PIU1 500 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 STOX1Q6ZVD7 989 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 IQCA1Q86XH1 822 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 ADHFE1Q8IWW8 467 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 TMEM192Q8IY95 271 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 ENAHQ8N8S7 591 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 IL31RAQ8NI17 732 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 SEPT8Q92599 483 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 FBXL18Q96ME1 805 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 SPATA33Q96N06 139 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 OSBPL7Q9BZF2 842 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 KAT14Q9H8E8 782 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 FAM50BQ9Y247 325 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 ZNF318Q5VUA4 2279 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 RALGAPA2Q2PPJ7 1873 aa11.89□□□□□ -0.51
TNFAIP3-202ENST00000420009 C17orf102A2RUQ5 167 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 PPP1R11O60927 126 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 KDM4AO75164 1064 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 LINC00271P0C7V0 271 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 SMIM10L2AP0DMW4 78 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 SMIM10L2BP0DMW5 78 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 TGFB3P10600 412 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 LTBRP36941 435 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 SP2Q02086 613 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 CTC1Q2NKJ3 1217 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 CCDC178Q5BJE1 867 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 VSIG10LQ86VR7 867 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 ATP6V0A1Q93050 837 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 MTMR8Q96EF0 704 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 AMNQ9BXJ7 453 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 MAP3K20Q9NYL2 800 aaKnown RBP11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 ATG2AQ2TAZ0 1938 aa11.88□□□□□ -0.51
TNFAIP3-202ENST00000420009 NLRC5Q86WI3 1866 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 C5orf67F2Z3F1 127 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 H3BRB1 525 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 ZNF213O14771 459 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 TREHO43280 583 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 DHX16O60231 1041 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 SORBS3O60504 671 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 LGALS2P05162 132 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 CTSHP09668 335 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 PARP1P09874 1014 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 MYCLP12524 364 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 IRS1P35568 1242 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 PGM5Q15124 567 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 SMAD2Q15796 467 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 ANKRD45Q5TZF3 282 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 HFE2Q6ZVN8 426 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 RPAINQ86UA6 219 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 GPKOWQ92917 476 aaPredicted RBP eCLIP11.87□□□□□ -0.512e-6■■■■■ 37.1
TNFAIP3-202ENST00000420009 ZSCAN10Q96SZ4 725 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 IFIH1Q9BYX4 1025 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 TUT1Q9H6E5 874 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 RC3H2Q9HBD1 1191 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 CLDND1Q9NY35 253 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 TRIOO75962 3097 aa11.87□□□□□ -0.51
TNFAIP3-202ENST00000420009 MYH6P13533 1939 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 B4E1Z4 1266 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 NCK2O43639 380 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 UPP2O95045 317 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 MFAP1P55081 439 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 HERC4Q5GLZ8 1057 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 FAM26DQ5JW98 314 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 DIEXFQ68CQ4 756 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 SAMD3Q8N6K7 520 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 APBB2Q92870 758 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 LMAN2LQ9H0V9 348 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 RNPEPQ9H4A4 650 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 VAT1LQ9HCJ6 419 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 USP34Q70CQ2 3546 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 MYH7BA7E2Y1 1941 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 FRMPD4Q14CM0 1322 aa11.86□□□□□ -0.51
TNFAIP3-202ENST00000420009 TBX10O75333 385 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 RB1P06400 928 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 CCND2P30279 289 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 HOXA13P31271 388 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 CTNNB1P35222 781 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms