RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ARHGEF18Q6ZSZ5 1173 aa5.1□□□□□ -1.59
SDCBPP3-201ENST00000419629 RCBTB1Q8NDN9 531 aa5.1□□□□□ -1.59
SDCBPP3-201ENST00000419629 DIO2Q92813 273 aa5.1□□□□□ -1.59
SDCBPP3-201ENST00000419629 TMEM169Q96HH4 297 aa5.1□□□□□ -1.59
SDCBPP3-201ENST00000419629 TANGO6Q9C0B7 1094 aa5.1□□□□□ -1.59
SDCBPP3-201ENST00000419629 PCED1AQ9H1Q7 454 aa5.1□□□□□ -1.59
SDCBPP3-201ENST00000419629 DEF6Q9H4E7 631 aa5.1□□□□□ -1.59
SDCBPP3-201ENST00000419629 TBX1O43435 398 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 B4GALT4O60513 344 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 SELENOPP49908 381 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 TESK1Q15569 626 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 CHRNA2Q15822 529 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 EMC4Q5J8M3 183 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 STEAP3Q658P3 488 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 SLFN13Q68D06 897 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 PALM2Q8IXS6 379 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 CKAP2LQ8IYA6 745 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 KLHL36Q8N4N3 616 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 TMEM209Q96SK2 561 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 SLITRK6Q9H5Y7 841 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 ZNF408Q9H9D4 720 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 CROTQ9UKG9 612 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 PCDHB4Q9Y5E5 795 aa5.09□□□□□ -1.59
SDCBPP3-201ENST00000419629 U2SURPO15042 1029 aaKnown RBP5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 MEFVO15553 781 aaPredicted RBP5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 ZNF623O75123 536 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 SCG5P05408 212 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 COL6A1P12109 1028 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 HOXC12P31275 282 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 ETFBP38117 255 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 NFATC3Q12968 1075 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 KCNAB2Q13303 367 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 BTN2A2Q8WVV5 523 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 WRNIP1Q96S55 665 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 TRIM55Q9BYV6 548 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 MEGF9Q9H1U4 602 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 FTSJ1Q9UET6 329 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 TCAF1Q9Y4C2 921 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 TESMINQ9Y4I5 508 aa5.08□□□□□ -1.6
SDCBPP3-201ENST00000419629 H7BY64 318 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 DDAH1O94760 285 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 ITGAVP06756 1048 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 LTBRP36941 435 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 ECI1P42126 302 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 KLF10Q13118 480 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 LSAMPQ13449 338 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 SF1Q15637 639 aaKnown RBP5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 SPDYAQ5MJ70 313 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 ACBD5Q5T8D3 534 aaPredicted RBP5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 DENND5AQ6IQ26 1287 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 ANKS3Q6ZW76 656 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 FAM178BQ8IXR5 827 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 Q8TCH9 128 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 ARMC5Q96C12 935 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 CHAMP1Q96JM3 812 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 HIRIP3Q9BW71 556 aaPredicted RBP5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 SEMA4AQ9H3S1 761 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 HSPBP1Q9NZL4 362 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 ZDHHC9Q9Y397 364 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 PCDHA2Q9Y5H9 948 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 HS3ST3A1Q9Y663 406 aa5.07□□□□□ -1.6
SDCBPP3-201ENST00000419629 AGRPO00253 132 aa5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 MUSKO15146 869 aa5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 SNRPB2P08579 225 aaKnown RBP5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 LCP1P13796 627 aa5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 PRSS53Q2L4Q9 553 aa5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 NBPF6Q5VWK0 638 aa5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 TRMT10BQ6PF06 316 aaKnown RBP5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 C6orf15Q6UXA7 325 aaPredicted RBP5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 TMC5Q6UXY8 1006 aa5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 NBPF4Q96M43 638 aa5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 CDIP1Q9H305 208 aa5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 BARX1Q9HBU1 254 aaPredicted RBP5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 LRP2BPQ9P2M1 347 aa5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 RBPJLQ9UBG7 517 aa5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 ADAM29Q9UKF5 820 aa5.06□□□□□ -1.6
SDCBPP3-201ENST00000419629 DGKIO75912 1065 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 KLHL18O94889 574 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 CPP00450 1065 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 GTF2F1P35269 517 aaKnown RBP eCLIP5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 CRB2Q5IJ48 1285 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 SOGA3Q5TF21 947 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 EEPD1Q7L9B9 569 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 ZNF227Q86WZ6 799 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 PROSER1Q86XN7 944 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 NUDT10Q8NFP7 164 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 NUDT11Q96G61 164 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 CCDC140Q96MF4 163 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 EPN3Q9H201 632 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 SMOC1Q9H4F8 434 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 CLDND1Q9NY35 253 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 MYOTQ9UBF9 498 aa5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 ING1Q9UK53 422 aaPredicted RBP5.05□□□□□ -1.6
SDCBPP3-201ENST00000419629 CNOT4O95628 575 aaKnown RBP5.04□□□□□ -1.6
SDCBPP3-201ENST00000419629 CAPNS1P04632 268 aa5.04□□□□□ -1.6
SDCBPP3-201ENST00000419629 KRTAP1-1Q07627 177 aa5.04□□□□□ -1.6
SDCBPP3-201ENST00000419629 PPIL6Q8IXY8 311 aa5.04□□□□□ -1.6
SDCBPP3-201ENST00000419629 PHOSPHO1Q8TCT1 267 aa5.04□□□□□ -1.6
SDCBPP3-201ENST00000419629 HNRNPLLQ8WVV9 542 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms