RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 ERFP50548 548 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 LACTBP83111 547 aaPredicted RBP12.8□□□□□ -0.36
DDR1-232ENST00000418800 CHRNDQ07001 517 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 DDR1Q08345 913 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 SH3RF1Q7Z6J0 888 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 SPATA20Q8TB22 786 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 ISCA1Q9BUE6 129 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 DNAJC17Q9NVM6 304 aaKnown RBP12.8□□□□□ -0.36
DDR1-232ENST00000418800 STRCQ7RTU9 1775 aa12.8□□□□□ -0.36
DDR1-232ENST00000418800 DCDC2CA8MYV0 355 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 PLTPP55058 493 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 PPP2R2AP63151 447 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 MMGT1Q8N4V1 131 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 SHISA4Q96DD7 197 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 NOP53Q9NZM5 478 aaKnown RBP12.79□□□□□ -0.36
DDR1-232ENST00000418800 NWD1Q149M9 1564 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 TRIM37O94972 964 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 IL2RBP14784 551 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 SKOR1P84550 965 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 IKQ13123 557 aaPredicted RBP12.79□□□□□ -0.36
DDR1-232ENST00000418800 ASIC2Q16515 512 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 TMEM266Q2M3C6 531 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 DHTKD1Q96HY7 919 aaPredicted RBP12.79□□□□□ -0.36
DDR1-232ENST00000418800 SH3GL3Q99963 347 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 INTS9Q9NV88 658 aaKnown RBP12.79□□□□□ -0.36
DDR1-232ENST00000418800 BCS1LQ9Y276 419 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 TOPAZ1Q8N9V7 1692 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 ATP6V1G2O95670 118 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 CCDC152Q4G0S7 254 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 KRT79Q5XKE5 535 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 GLIS3Q8NEA6 775 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 U2AF1L4Q8WU68 220 aaKnown RBP12.79□□□□□ -0.36
DDR1-232ENST00000418800 TLR10Q9BXR5 811 aa12.79□□□□□ -0.36
DDR1-232ENST00000418800 ARPP21Q9UBL0 812 aaPredicted RBP12.79□□□□□ -0.36
DDR1-232ENST00000418800 STRCP1A6NGW2 1772 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 MON2Q7Z3U7 1717 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 A0A1W2PQC6 194 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 LRRC10BA6NIK2 292 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 OR52Z1P0C646 297 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 HSD17B3P37058 310 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 RANBP1P43487 201 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 ATP11AP98196 1134 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 PLS1Q14651 629 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 TTI2Q6NXR4 508 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 USP17L2Q6R6M4 530 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 RETREG2Q8NC44 543 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 CTNNBL1Q8WYA6 563 aaPredicted RBP12.78□□□□□ -0.36
DDR1-232ENST00000418800 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
DDR1-232ENST00000418800 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
DDR1-232ENST00000418800 RASSF9O75901 435 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 TROAPQ12815 778 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 ZNF211Q13398 564 aaPredicted RBP12.78□□□□□ -0.36
DDR1-232ENST00000418800 DUSP9Q99956 384 aaKnown RBP12.78□□□□□ -0.36
DDR1-232ENST00000418800 TRIM9Q9C026 710 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 RGS16O15492 202 aaPredicted RBP12.78□□□□□ -0.36
DDR1-232ENST00000418800 ACTN1P12814 892 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 CCDC6Q16204 474 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 FAM98CQ17RN3 349 aaKnown RBP12.78□□□□□ -0.36
DDR1-232ENST00000418800 LONP2Q86WA8 852 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 MAPKAPK5Q8IW41 473 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 TSC22D3Q99576 134 aa12.78□□□□□ -0.36
DDR1-232ENST00000418800 PDS5AQ29RF7 1337 aaKnown RBP12.77□□□□□ -0.36
DDR1-232ENST00000418800 FRMPD2Q68DX3 1309 aaPredicted RBP12.77□□□□□ -0.36
DDR1-232ENST00000418800 KCNQ2O43526 872 aa12.77□□□□□ -0.36
DDR1-232ENST00000418800 VPS41P49754 854 aa12.77□□□□□ -0.36
DDR1-232ENST00000418800 NONOQ15233 471 aaKnown RBP eCLIP12.77□□□□□ -0.36
DDR1-232ENST00000418800 RDH13Q8NBN7 331 aa12.77□□□□□ -0.36
DDR1-232ENST00000418800 ATP6V0A4Q9HBG4 840 aa12.77□□□□□ -0.36
DDR1-232ENST00000418800 TMEM260Q9NX78 707 aa12.77□□□□□ -0.36
DDR1-232ENST00000418800 SWAP70Q9UH65 585 aa12.77□□□□□ -0.36
DDR1-232ENST00000418800 TRPC6Q9Y210 931 aa12.77□□□□□ -0.36
DDR1-232ENST00000418800 TCRBV5S4A2TA0A5A2 114 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 KLRF2D3W0D1 207 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 MAN2A1Q16706 1144 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 FAM83BQ5T0W9 1011 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 PTF1AQ7RTS3 328 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 GDAP1Q8TB36 358 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 TBCKQ8TEA7 893 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 TRIM51Q9BSJ1 452 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 PCDHA4Q9UN74 947 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 PTPN22Q9Y2R2 807 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 MAP3K15Q6ZN16 1313 aa12.77□□□□□ -0.37
DDR1-232ENST00000418800 SART1O43290 800 aaKnown RBP12.76□□□□□ -0.37
DDR1-232ENST00000418800 ELF3P78545 371 aaPredicted RBP12.76□□□□□ -0.37
DDR1-232ENST00000418800 SPICE1Q8N0Z3 855 aa12.76□□□□□ -0.37
DDR1-232ENST00000418800 AGAP11Q8TF27 550 aa12.76□□□□□ -0.37
DDR1-232ENST00000418800 COA7Q96BR5 231 aa12.76□□□□□ -0.37
DDR1-232ENST00000418800 CHMP6Q96FZ7 201 aa12.76□□□□□ -0.37
DDR1-232ENST00000418800 PANK4Q9NVE7 773 aa12.76□□□□□ -0.37
DDR1-232ENST00000418800 UTP11Q9Y3A2 253 aaKnown RBP12.76□□□□□ -0.37
DDR1-232ENST00000418800 PCNTO95613 3336 aa12.76□□□□□ -0.37
DDR1-232ENST00000418800 A0A087X0T9 212 aa12.76□□□□□ -0.37
DDR1-232ENST00000418800 SPDYE3A6NKU9 549 aa12.76□□□□□ -0.37
DDR1-232ENST00000418800 TTI1O43156 1089 aa12.76□□□□□ -0.37
DDR1-232ENST00000418800 HIP1RO75146 1068 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms