RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 TRAPPC3LQ5T215 181 aa14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 ARL6IP4Q66PJ3 421 aaKnown RBP14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 CTNNBL1Q8WYA6 563 aaPredicted RBP14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 ANKRD2Q9GZV1 360 aa14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 STIM2Q9P246 746 aa14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 BAZ2AQ9UIF9 1905 aaKnown RBP14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 ACTN3Q08043 901 aaPredicted RBP14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 GRM4Q14833 912 aa14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 MAN2A1Q16706 1144 aa14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 CT47A1Q5JQC4 288 aaPredicted RBP14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 MIIPQ5JXC2 388 aa14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 WDR66Q8TBY9 1149 aa14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 PYM1Q9BRP8 204 aaKnown RBP14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 KBTBD4Q9NVX7 518 aa14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 ATP8A1Q9Y2Q0 1164 aa14.51□□□□□ -0.09
TNFRSF8-203ENST00000417814 GOLGA6L7A0A1B0GV03 622 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 RBAK-RBAKDNI3L0D1 243 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 COASYQ13057 564 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 DGKHQ86XP1 1220 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 CREG2Q8IUH2 290 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 SYCP3Q8IZU3 236 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 ZNF507Q8TCN5 953 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 LBHD1Q9BQE6 289 aaPredicted RBP14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 NUP58Q9BVL2 599 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 BHMT2Q9H2M3 363 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 RAB21Q9UL25 225 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 FAM184BQ9ULE4 1060 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 PDS5AQ29RF7 1337 aaKnown RBP14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 PSMD14O00487 310 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 TRIM49P0CI25 452 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 TRIM49CP0CI26 452 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 CASP4P49662 377 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 E2F5Q15329 346 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 FAM182AQ5T1J6 154 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 MMTAG2Q9BU76 263 aaKnown RBP14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 ZC3H12CQ9C0D7 883 aaKnown RBP14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 MED4Q9NPJ6 270 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 EMILIN3Q9NT22 766 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 GGA1Q9UJY5 639 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 KRIT1O00522 736 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 ITGA4P13612 1032 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 CTNNA1P35221 906 aaKnown RBP14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 MUM1L1Q5H9M0 696 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 MEX3CQ5U5Q3 659 aaKnown RBP14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 ADGRF4Q8IZF3 695 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 MDM1Q8TC05 714 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 DNAJC7Q99615 494 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 CD209Q9NNX6 404 aa14.5□□□□□ -0.09
TNFRSF8-203ENST00000417814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 PLA2G4BP0C869 781 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 NFIAQ12857 509 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 KRT71Q3SY84 523 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 CCDC38Q502W7 563 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 ZC2HC1CQ53FD0 456 aaPredicted RBP14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 CAPN12Q6ZSI9 719 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 PEX26Q7Z412 305 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 KIRREL3Q8IZU9 778 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 ZNF287Q9HBT7 754 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 BLOC1S4Q9NUP1 217 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 SEMA3EO15041 775 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 CETN3O15182 167 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 ORC4O43929 436 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 CASP5P51878 434 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 KCNH2Q12809 1159 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 EP400NLQ6ZTU2 488 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 ZFPM1Q8IX07 1006 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 MYCT1Q8N699 235 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 RNPC3Q96LT9 517 aaKnown RBP14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 PNMA5Q96PV4 448 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 SH2D4AQ9H788 454 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 ANAPC4Q9UJX5 808 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 PLAAQ9Y263 795 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 COL4A3BPQ9Y5P4 624 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 LMO7Q8WWI1 1683 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 LRRC10BA6NIK2 292 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 MCM3P25205 808 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 OTUD6AQ7L8S5 288 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 TRIM51Q9BSJ1 452 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 TMOD4Q9NZQ9 345 aa14.49□□□□□ -0.09
TNFRSF8-203ENST00000417814 AGPSO00116 658 aa14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 DAPK3O43293 454 aa14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 RAD51CO43502 376 aa14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 OPA1O60313 960 aa14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 PPFIA4O75335 1185 aa14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 MTM1Q13496 603 aa14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 TRIP13Q15645 432 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 AADACL2Q6P093 401 aa14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 SFR1Q86XK3 245 aa14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 FAM118BQ9BPY3 351 aa14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 GEMIN8Q9NWZ8 242 aaKnown RBP14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 NOVA2Q9UNW9 492 aaKnown RBP14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 COL1A1P02452 1464 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 TBCAO75347 108 aaKnown RBP14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 FKBP3Q00688 224 aaKnown RBP14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 C2CD6Q53TS8 623 aa14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 IFT20Q8IY31 132 aa14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 PAIP2Q9BPZ3 127 aaKnown RBP14.48□□□□□ -0.09
TNFRSF8-203ENST00000417814 TLR10Q9BXR5 811 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms