RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 EVCP57679 992 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 ITGB3BPQ13352 177 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-206ENST00000417540 NPY5RQ15761 445 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 NECAB1Q8N987 351 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 RNPC3Q96LT9 517 aaKnown RBP11.72□□□□□ -0.53
HDLBP-206ENST00000417540 GPR20Q99678 358 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 C16orf70Q9BSU1 422 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 OSBPL7Q9BZF2 842 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 TM6SF1Q9BZW5 370 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 MAF1Q9H063 256 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 CXXC1Q9P0U4 656 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-206ENST00000417540 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 UBIAD1Q9Y5Z9 338 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 COL4A6Q14031 1691 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 KAT6AQ92794 2004 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 SPDYE3A6NKU9 549 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 GRXCR1A8MXD5 290 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 B4DLN1 442 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 SPATA31C2B4DYI2 1134 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 FAM86B1E9PN63 330 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 DDX39AO00148 427 aaKnown RBP11.71□□□□□ -0.53
HDLBP-206ENST00000417540 HAS3O00219 553 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 TLR3O15455 904 aaKnown RBP11.71□□□□□ -0.53
HDLBP-206ENST00000417540 JAK2O60674 1132 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 FAM86B2P0C5J1 330 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 ARP10275 920 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 IFNAR1P17181 557 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 MARK3P27448 753 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 SREBF1P36956 1147 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 MRPL12P52815 198 aaKnown RBP11.71□□□□□ -0.53
HDLBP-206ENST00000417540 KIAA0753Q2KHM9 967 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 GNPTABQ3T906 1256 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 UTP14CQ5TAP6 766 aaKnown RBP11.71□□□□□ -0.53
HDLBP-206ENST00000417540 MFSD5Q6N075 450 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 METTL7BQ6UX53 244 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 GJA10Q969M2 543 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 FAM161BQ96MY7 647 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 RNF26Q9BY78 433 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-206ENST00000417540 MAP3K20Q9NYL2 800 aaKnown RBP11.71□□□□□ -0.53
HDLBP-206ENST00000417540 GTF2IRD1Q9UHL9 959 aa11.71□□□□□ -0.53
HDLBP-206ENST00000417540 MYH9P35579 1960 aaKnown RBP11.7□□□□□ -0.54
HDLBP-206ENST00000417540 MUC3AQ02505 3323 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 PRPF3O43395 683 aaKnown RBP11.7□□□□□ -0.54
HDLBP-206ENST00000417540 EPB41L2O43491 1005 aaKnown RBP11.7□□□□□ -0.54
HDLBP-206ENST00000417540 ARHGAP4P98171 946 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 MTMR1Q13613 665 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 DGKDQ16760 1214 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 ME3Q16798 604 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 TRIM71Q2Q1W2 868 aaKnown RBP11.7□□□□□ -0.54
HDLBP-206ENST00000417540 LRIT3Q3SXY7 679 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 TMEM240Q5SV17 173 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 TRAF7Q6Q0C0 670 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 DEFB128Q7Z7B8 93 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 DEFB123Q8N688 67 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 SAMD3Q8N6K7 520 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 GPRASP2Q96D09 838 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 IL17RAQ96F46 866 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 PCYT2Q99447 389 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 KIF2CQ99661 725 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 MLXIPQ9HAP2 919 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 NLRC5Q86WI3 1866 aa11.7□□□□□ -0.54
HDLBP-206ENST00000417540 CUL9Q8IWT3 2517 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 IGLV3-22A0A075B6J6 115 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 ESYT2A0FGR8 921 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 hCG_1984214I3L0E3 225 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 NOP56O00567 594 aaKnown RBP11.69□□□□□ -0.54
HDLBP-206ENST00000417540 ARHGEF15O94989 841 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 CCNE2O96020 404 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 CTSHP09668 335 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 SMIM10L2AP0DMW4 78 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 SMIM10L2BP0DMW5 78 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 PBX2P40425 430 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 TRAF1Q13077 416 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 AP3B2Q13367 1082 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 LAMC2Q13753 1193 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 MBTPS1Q14703 1052 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 GPNMBQ14956 572 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 PTGISQ16647 500 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 NFRKBQ6P4R8 1299 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 RUFY4Q6ZNE9 571 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 TMCO2Q7Z6W1 182 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-206ENST00000417540 REXO1Q8N1G1 1221 aaKnown RBP11.69□□□□□ -0.54
HDLBP-206ENST00000417540 ZNF713Q8N859 430 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-206ENST00000417540 LENG9Q96B70 501 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 MXRA8Q9BRK3 442 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 COL25A1Q9BXS0 654 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-206ENST00000417540 ZMYND12Q9H0C1 365 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 JADE2Q9NQC1 790 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 KCNJ14Q9UNX9 436 aa11.69□□□□□ -0.54
HDLBP-206ENST00000417540 GSTTP1A0A1W2PQM5 241 aa11.68□□□□□ -0.54
HDLBP-206ENST00000417540 TDP2O95551 362 aa11.68□□□□□ -0.54
HDLBP-206ENST00000417540 HOXC8P31273 242 aa11.68□□□□□ -0.54
HDLBP-206ENST00000417540 TCF7P36402 384 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-206ENST00000417540 BRDTQ58F21 947 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-206ENST00000417540 EARS2Q5JPH6 523 aaKnown RBP11.68□□□□□ -0.54
HDLBP-206ENST00000417540 ZNF365Q70YC5 407 aa11.68□□□□□ -0.54
HDLBP-206ENST00000417540 OTOP2Q7RTS6 562 aa11.68□□□□□ -0.54
HDLBP-206ENST00000417540 SPRED2Q7Z698 418 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms