RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 PPP4R3AQ6IN85 833 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 MMGT1Q8N4V1 131 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 GOLGA6L1Q8N7Z2 621 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16■□□□□ 0.15
HDAC9-208ENST00000417496 SERPINB13Q9UIV8 391 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 FAM184BQ9ULE4 1060 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 RRP15Q9Y3B9 282 aaKnown RBP16■□□□□ 0.15
HDAC9-208ENST00000417496 ZSCAN5CA6NGD5 496 aaPredicted RBP16■□□□□ 0.15
HDAC9-208ENST00000417496 IQCEQ6IPM2 695 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 CERS3Q8IU89 383 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 ZFPM1Q8IX07 1006 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 CUL5Q93034 780 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 PACSIN1Q9BY11 444 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 HYOU1Q9Y4L1 999 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 IGKV6D-41A0A0C4DH26 115 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 ESYT3A0FGR9 886 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 GYS1P13807 737 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 CACNB3P54284 484 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 PTPROQ16827 1216 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 HAUS3Q68CZ6 603 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 TTC19Q6DKK2 380 aaPredicted RBP15.99■□□□□ 0.15
HDAC9-208ENST00000417496 SRLQ86TD4 932 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 SLF2Q8IX21 1173 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 TBC1D5Q92609 795 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 RBM17Q96I25 401 aaKnown RBP15.99■□□□□ 0.15
HDAC9-208ENST00000417496 EHD4Q9H223 541 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 USP40Q9NVE5 1235 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 ADAMTS1Q9UHI8 967 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 CDK5RAP2Q96SN8 1893 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 PALMO75781 387 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 KLRC1P26715 233 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 SHMT1P34896 483 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 NFIAQ12857 509 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 PSMD2Q13200 908 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 DNAJC21Q5F1R6 531 aaKnown RBP15.99■□□□□ 0.15
HDAC9-208ENST00000417496 CCDC70Q6NSX1 233 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 GPBP1Q86WP2 473 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 TSEN2Q8NCE0 465 aaKnown RBP15.99■□□□□ 0.15
HDAC9-208ENST00000417496 SCFD1Q8WVM8 642 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 NOX5Q96PH1 765 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 BCAS3Q9H6U6 928 aa15.99■□□□□ 0.15
HDAC9-208ENST00000417496 SRCAPQ6ZRS2 3230 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 A0A087X0T9 212 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 hCG_1984214I3L0E3 225 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 MEIS1O00470 390 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 ZBTB5O15062 677 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 PLA2G4BP0C869 781 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 FAM228BP0C875 321 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 ACTN1P12814 892 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 TAL1P17542 331 aaPredicted RBP15.98■□□□□ 0.15
HDAC9-208ENST00000417496 TCP1P17987 556 aaKnown RBP15.98■□□□□ 0.15
HDAC9-208ENST00000417496 CASP5P51878 434 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 MRPL12P52815 198 aaKnown RBP15.98■□□□□ 0.15
HDAC9-208ENST00000417496 RAPGEF1Q13905 1077 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 SFMBT2Q5VUG0 894 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 ZNF713Q8N859 430 aaPredicted RBP15.98■□□□□ 0.15
HDAC9-208ENST00000417496 FAM133AQ8N9E0 248 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 TBC1D22AQ8WUA7 517 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 IQCDQ96DY2 449 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 PCDHA2Q9Y5H9 948 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.98■□□□□ 0.15
HDAC9-208ENST00000417496 POTEFA5A3E0 1075 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 POTEIP0CG38 1075 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 PRLRP16471 622 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 PSMC6P62333 389 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 SLC9C1Q4G0N8 1177 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 POTEGQ6S5H5 508 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 POTEEQ6S8J3 1075 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 GOLPH3Q9H4A6 298 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 PCDHAC2Q9Y5I4 1007 aa15.98■□□□□ 0.15
HDAC9-208ENST00000417496 PJA2O43164 708 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 MED24O75448 989 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 GLI1P08151 1106 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 PAFAH1B1P43034 410 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 ADAM9Q13443 819 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 TRADDQ15628 312 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 ARSHQ5FYA8 562 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 CERKQ8TCT0 537 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 BMP2KQ9NSY1 1161 aaPredicted RBP15.97■□□□□ 0.15
HDAC9-208ENST00000417496 CEP72Q9P209 647 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 STIM2Q9P246 746 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 ABCB11O95342 1321 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 BTAF1O14981 1849 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 FAM170AA1A519 330 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 GOLGA6CA6NDK9 693 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 BBOX1O75936 387 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 IVLP07476 585 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 GOLGA6DP0CG33 693 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 TCP10Q12799 353 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 PROM2Q8N271 834 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 P2RX7Q99572 595 aaKnown RBP15.97■□□□□ 0.15
HDAC9-208ENST00000417496 EMILIN3Q9NT22 766 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 GOLGA6AQ9NYA3 693 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 PCDHA1Q9Y5I3 950 aa15.97■□□□□ 0.15
HDAC9-208ENST00000417496 ZNF831Q5JPB2 1677 aa15.96■□□□□ 0.15
HDAC9-208ENST00000417496 SSU72P8A0A1W2PR75 194 aa15.96■□□□□ 0.15
HDAC9-208ENST00000417496 KRT18P05783 430 aaKnown RBP15.96■□□□□ 0.15
HDAC9-208ENST00000417496 CYP11B2P19099 503 aa15.96■□□□□ 0.15
HDAC9-208ENST00000417496 KIAA0753Q2KHM9 967 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms