RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 PAK2Q13177 524 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 CCDC93Q567U6 631 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 FAM26DQ5JW98 314 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 MEI1Q5TIA1 1274 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 NANOGNBQ7Z5D8 188 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 PDILTQ8N807 584 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 ZBTB8BQ8NAP8 495 aaPredicted RBP9.8□□□□□ -0.84
SP140-204ENST00000417495 TSEN2Q8NCE0 465 aaKnown RBP9.8□□□□□ -0.84
SP140-204ENST00000417495 CLIP3Q96DZ5 547 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 VMP1Q96GC9 406 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 C8orf48Q96LL4 319 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 TAOK3Q9H2K8 898 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 CYLDQ9NQC7 956 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 VPS18Q9P253 973 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 CAPN7Q9Y6W3 813 aa9.8□□□□□ -0.84
SP140-204ENST00000417495 LTBP1Q14766 1721 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 SALL1Q9NSC2 1324 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 UBAP1LF5GYI3 381 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 NEMFO60524 1076 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 FGFR1OPO95684 399 aaKnown RBP9.79□□□□□ -0.84
SP140-204ENST00000417495 CYP21A2P08686 494 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 GJA5P36382 358 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 IGHMBP2P38935 993 aaKnown RBP9.79□□□□□ -0.84
SP140-204ENST00000417495 MATR3P43243 847 aaKnown RBP eCLIP9.79□□□□□ -0.84
SP140-204ENST00000417495 TIMM10P62072 90 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 ST3GAL1Q11201 340 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 BRDTQ58F21 947 aaPredicted RBP9.79□□□□□ -0.84
SP140-204ENST00000417495 SLC27A3Q5K4L6 730 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 GALNT17Q6IS24 598 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 BICDL1Q6ZP65 573 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 NEK10Q6ZWH5 1172 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 LINC00116Q8NCU8 138 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 NEUROD6Q96NK8 337 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 GSDMAQ96QA5 445 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 DHX36Q9H2U1 1008 aaKnown RBP9.79□□□□□ -0.84
SP140-204ENST00000417495 CHMP3Q9Y3E7 222 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 TTLL3Q9Y4R7 772 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 CACNA1SQ13698 1873 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 CCDC88AQ3V6T2 1871 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 MAP2K7O14733 419 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 ADAMTS2O95450 1211 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 ME3Q16798 604 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 C21orf62-AS1Q17RA5 79 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 CERKQ8TCT0 537 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 EMID1Q96A84 441 aaPredicted RBP9.79□□□□□ -0.84
SP140-204ENST00000417495 TCHPQ9BT92 498 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 RBCK1Q9BYM8 510 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 UPF3BQ9BZI7 483 aaKnown RBP9.79□□□□□ -0.84
SP140-204ENST00000417495 VCX3BQ9H321 246 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 ENAMQ9NRM1 1142 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 CNNM1Q9NRU3 951 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 TPCN1Q9ULQ1 816 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 MTMR6Q9Y217 621 aa9.79□□□□□ -0.84
SP140-204ENST00000417495 BZW2Q9Y6E2 419 aaKnown RBP9.79□□□□□ -0.84
SP140-204ENST00000417495 H3BQF6 201 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 PRPF3O43395 683 aaKnown RBP9.78□□□□□ -0.84
SP140-204ENST00000417495 BCRP11274 1271 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 PPP2R3CQ969Q6 453 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 ANKRD2Q9GZV1 360 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 SYNCQ9H7C4 482 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 CNTN3Q9P232 1028 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 TRPC5Q9UL62 973 aaPredicted RBP9.78□□□□□ -0.84
SP140-204ENST00000417495 TMCC3Q9ULS5 477 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 PRELID1Q9Y255 219 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 FAM25EA8MYX2 175 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 P4HA2O15460 535 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 SYT1P21579 422 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 ATP2B2Q01814 1243 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 SNCBQ16143 134 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 IMMTQ16891 758 aaKnown RBP9.78□□□□□ -0.84
SP140-204ENST00000417495 STK11IPQ8N1F8 1099 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 MAML3Q96JK9 1138 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 NAP1L3Q99457 506 aaPredicted RBP9.78□□□□□ -0.84
SP140-204ENST00000417495 OCSTAMPQ9BR26 566 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 OXCT2Q9BYC2 517 aaPredicted RBP9.78□□□□□ -0.84
SP140-204ENST00000417495 RABEP2Q9H5N1 569 aa9.78□□□□□ -0.84
SP140-204ENST00000417495 PABPN1LA6NDY0 278 aaKnown RBP9.77□□□□□ -0.84
SP140-204ENST00000417495 MTA2O94776 668 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 KIAA0754O94854 1291 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 GNAT1P11488 350 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 PTGS1P23219 599 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 MCAMP43121 646 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 TRIM29Q14134 588 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 SPDYCQ5MJ68 293 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 CCDC102BQ68D86 513 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 NCCRP1Q6ZVX7 275 aaPredicted RBP9.77□□□□□ -0.84
SP140-204ENST00000417495 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.77□□□□□ -0.84
SP140-204ENST00000417495 HNRNPLLQ8WVV9 542 aaKnown RBP9.77□□□□□ -0.84
SP140-204ENST00000417495 CENPOQ9BU64 300 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.77□□□□□ -0.84
SP140-204ENST00000417495 YIPF3Q9GZM5 350 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 PPCSQ9HAB8 311 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 USP21Q9UK80 565 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 SSX2IPQ9Y2D8 614 aa9.77□□□□□ -0.84
SP140-204ENST00000417495 TNRC6CQ9HCJ0 1690 aaKnown RBP9.77□□□□□ -0.84
SP140-204ENST00000417495 MYO5AQ9Y4I1 1855 aaKnown RBP9.77□□□□□ -0.85
SP140-204ENST00000417495 GOLGA6L4A6NEF3 574 aa9.77□□□□□ -0.85
SP140-204ENST00000417495 FOXP2O15409 715 aa9.77□□□□□ -0.85
SP140-204ENST00000417495 RASSF9O75901 435 aa9.77□□□□□ -0.85
SP140-204ENST00000417495 ADORA1P30542 326 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms