RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PURAQ00577 322 aaKnown RBP26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 CUL4AQ13619 759 aa26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 LRRC26Q2I0M4 334 aa26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 PRR16Q569H4 304 aa26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 PIK3AP1Q6ZUJ8 805 aa26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 NAP1L4Q99733 375 aaKnown RBP26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 AGO4Q9HCK5 861 aaKnown RBP26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 NR2E3Q9Y5X4 410 aa26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 BTBD18B2RXH4 712 aa26.23■■□□□ 1.79
SMARCB1-205ENST00000417137 K7ELQ4 463 aaPredicted RBP26.23■■□□□ 1.79
SMARCB1-205ENST00000417137 GJB2P29033 226 aa26.23■■□□□ 1.79
SMARCB1-205ENST00000417137 GUCY1B3Q02153 619 aa26.23■■□□□ 1.79
SMARCB1-205ENST00000417137 INF2Q27J81 1249 aa26.23■■□□□ 1.79
SMARCB1-205ENST00000417137 HSDL1Q3SXM5 330 aa26.23■■□□□ 1.79
SMARCB1-205ENST00000417137 MOXD1Q6UVY6 613 aa26.23■■□□□ 1.79
SMARCB1-205ENST00000417137 PKD2L1Q9P0L9 805 aa26.23■■□□□ 1.79
SMARCB1-205ENST00000417137 NFASCO94856 1347 aa26.22■■□□□ 1.79
SMARCB1-205ENST00000417137 IGLV3-22A0A075B6J6 115 aa26.22■■□□□ 1.79
SMARCB1-205ENST00000417137 NR5A1Q13285 461 aa26.22■■□□□ 1.79
SMARCB1-205ENST00000417137 SNX17Q15036 470 aa26.22■■□□□ 1.79
SMARCB1-205ENST00000417137 NEK8Q86SG6 692 aa26.22■■□□□ 1.79
SMARCB1-205ENST00000417137 CYP3A7-CYP3A51PA0A087WV96 503 aa26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 CYP3A7P24462 503 aa26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 RTP1P59025 263 aa26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 ITGA7Q13683 1181 aa26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 GNL2Q13823 731 aaKnown RBP26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 HSCBQ8IWL3 235 aa26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 ZNF577Q9BSK1 485 aa26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 FOXP1Q9H334 677 aaPredicted RBP26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 BCAS3Q9H6U6 928 aa26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 JPH1Q9HDC5 661 aaPredicted RBP26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 TBC1D22BQ9NU19 505 aa26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 ATP11BQ9Y2G3 1177 aa26.21■■□□□ 1.79
SMARCB1-205ENST00000417137 MROH7Q68CQ1 1323 aa26.2■■□□□ 1.79
SMARCB1-205ENST00000417137 ARVCFO00192 962 aa26.2■■□□□ 1.78
SMARCB1-205ENST00000417137 IPO5O00410 1097 aaKnown RBP26.2■■□□□ 1.78
SMARCB1-205ENST00000417137 HOXD8P13378 290 aaPredicted RBP26.2■■□□□ 1.78
SMARCB1-205ENST00000417137 GCFC2P16383 781 aaKnown RBP26.2■■□□□ 1.78
SMARCB1-205ENST00000417137 LETM2Q2VYF4 491 aa26.2■■□□□ 1.78
SMARCB1-205ENST00000417137 Q4G0T1 1027 aa26.2■■□□□ 1.78
SMARCB1-205ENST00000417137 TNFRSF25Q93038 417 aa26.2■■□□□ 1.78
SMARCB1-205ENST00000417137 GPR20Q99678 358 aa26.2■■□□□ 1.78
SMARCB1-205ENST00000417137 KATNAL1Q9BW62 490 aa26.2■■□□□ 1.78
SMARCB1-205ENST00000417137 SLC9A2Q9UBY0 812 aa26.2■■□□□ 1.78
SMARCB1-205ENST00000417137 SP4Q02446 784 aa26.19■■□□□ 1.78
SMARCB1-205ENST00000417137 SEPT1Q8WYJ6 367 aa26.19■■□□□ 1.78
SMARCB1-205ENST00000417137 INTS4Q96HW7 963 aaKnown RBP26.19■■□□□ 1.78
SMARCB1-205ENST00000417137 TCEAL9Q9UHQ7 104 aa26.19■■□□□ 1.78
SMARCB1-205ENST00000417137 MKI67P46013 3256 aaKnown RBP26.18■■□□□ 1.78
SMARCB1-205ENST00000417137 DCDC2CA8MYV0 355 aa26.18■■□□□ 1.78
SMARCB1-205ENST00000417137 H3BQV1 296 aa26.18■■□□□ 1.78
SMARCB1-205ENST00000417137 EDIL3O43854 480 aa26.18■■□□□ 1.78
SMARCB1-205ENST00000417137 CDK7P50613 346 aa26.18■■□□□ 1.78
SMARCB1-205ENST00000417137 PSMC6P62333 389 aa26.18■■□□□ 1.78
SMARCB1-205ENST00000417137 TRIM60Q495X7 471 aa26.18■■□□□ 1.78
SMARCB1-205ENST00000417137 PPP4R3AQ6IN85 833 aa26.18■■□□□ 1.78
SMARCB1-205ENST00000417137 TOX2Q96NM4 488 aa26.18■■□□□ 1.78
SMARCB1-205ENST00000417137 DDX25Q9UHL0 483 aaKnown RBP26.18■■□□□ 1.78
SMARCB1-205ENST00000417137 CCNT1O60563 726 aaKnown RBP26.17■■□□□ 1.78
SMARCB1-205ENST00000417137 ITGB3BPQ13352 177 aaPredicted RBP26.17■■□□□ 1.78
SMARCB1-205ENST00000417137 ANKRD33Q7Z3H0 272 aa26.17■■□□□ 1.78
SMARCB1-205ENST00000417137 C7orf61Q8IZ16 206 aa26.17■■□□□ 1.78
SMARCB1-205ENST00000417137 SLC43A3Q8NBI5 491 aa26.17■■□□□ 1.78
SMARCB1-205ENST00000417137 LENG9Q96B70 501 aa26.17■■□□□ 1.78
SMARCB1-205ENST00000417137 MBOAT7Q96N66 472 aa26.17■■□□□ 1.78
SMARCB1-205ENST00000417137 TLR3O15455 904 aaKnown RBP26.16■■□□□ 1.78
SMARCB1-205ENST00000417137 TDP2O95551 362 aa26.16■■□□□ 1.78
SMARCB1-205ENST00000417137 TLE2Q04725 743 aa26.16■■□□□ 1.78
SMARCB1-205ENST00000417137 NBPF20Q3BBV1 942 aa26.16■■□□□ 1.78
SMARCB1-205ENST00000417137 EARS2Q5JPH6 523 aaKnown RBP26.16■■□□□ 1.78
SMARCB1-205ENST00000417137 LARP1BQ659C4 914 aaKnown RBP26.16■■□□□ 1.78
SMARCB1-205ENST00000417137 NFRKBQ6P4R8 1299 aa26.16■■□□□ 1.78
SMARCB1-205ENST00000417137 MSH4O15457 936 aa26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 PQBP1O60828 265 aaKnown RBP26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 LGALS2P05162 132 aa26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 ZNF286BP0CG31 522 aa26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 PDCP20941 246 aa26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 TCF7P36402 384 aaPredicted RBP26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 CHMP4BP1P59074 171 aa26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 PTPN11Q06124 597 aaPredicted RBP26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 KAT2BQ92831 832 aa26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 RIT2Q99578 217 aa26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 PRKAG2Q9UGJ0 569 aa26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 ZNF215Q9UL58 517 aaPredicted RBP26.15■■□□□ 1.78
SMARCB1-205ENST00000417137 GRIN2DO15399 1336 aa26.14■■□□□ 1.78
SMARCB1-205ENST00000417137 H3BRB1 525 aa26.14■■□□□ 1.78
SMARCB1-205ENST00000417137 DHX15O43143 795 aaKnown RBP26.14■■□□□ 1.78
SMARCB1-205ENST00000417137 F2P00734 622 aa26.14■■□□□ 1.78
SMARCB1-205ENST00000417137 PSEN2P49810 448 aa26.14■■□□□ 1.78
SMARCB1-205ENST00000417137 MFSD10Q14728 455 aa26.14■■□□□ 1.78
SMARCB1-205ENST00000417137 UTP14CQ5TAP6 766 aaKnown RBP26.14■■□□□ 1.78
SMARCB1-205ENST00000417137 NOSTRINQ8IVI9 506 aa26.14■■□□□ 1.78
SMARCB1-205ENST00000417137 C16orf70Q9BSU1 422 aa26.14■■□□□ 1.78
SMARCB1-205ENST00000417137 TUT1Q9H6E5 874 aaKnown RBP26.14■■□□□ 1.78
SMARCB1-205ENST00000417137 GSTTP1A0A1W2PQM5 241 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 FAM205CA6NFA0 338 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 DDX39AO00148 427 aaKnown RBP26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 MARCH6O60337 910 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 U2AF2P26368 475 aaKnown RBP eCLIP26.13■■□□□ 1.773e-8■□□□□ 9.3
SMARCB1-205ENST00000417137 ACTR2P61160 394 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms