RNA–Protein interactions for RNA: ENST00000416492.5

AFF3-205, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-205ENST00000416492 PCDHA12Q9UN75 941 aa17.24■□□□□ 0.35
AFF3-205ENST00000416492 PCDHB6Q9Y5E3 794 aa17.24■□□□□ 0.35
AFF3-205ENST00000416492 MORC2Q9Y6X9 1032 aaPredicted RBP17.24■□□□□ 0.35
AFF3-205ENST00000416492 KPNA6O60684 536 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 DKC1O60832 514 aaKnown RBP eCLIP17.23■□□□□ 0.35
AFF3-205ENST00000416492 ARP10275 920 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 KCNA2P16389 499 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 SMPD1P17405 629 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 CCND3P30281 292 aaPredicted RBP17.23■□□□□ 0.35
AFF3-205ENST00000416492 TOB1P50616 345 aaPredicted RBP17.23■□□□□ 0.35
AFF3-205ENST00000416492 ATP2C1P98194 919 aaPredicted RBP17.23■□□□□ 0.35
AFF3-205ENST00000416492 TRIM32Q13049 653 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 PTGDRQ13258 359 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 LY6KQ17RY6 165 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 CELF3Q5SZQ8 465 aaKnown RBP17.23■□□□□ 0.35
AFF3-205ENST00000416492 ZNF746Q6NUN9 644 aaPredicted RBP17.23■□□□□ 0.35
AFF3-205ENST00000416492 DTHD1Q6ZMT9 781 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 ARRDC4Q8NCT1 418 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 CYP2W1Q8TAV3 490 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 ETNPPLQ8TBG4 499 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 FERMT2Q96AC1 680 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 LENG9Q96B70 501 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 ZFP91Q96JP5 570 aaPredicted RBP17.23■□□□□ 0.35
AFF3-205ENST00000416492 SPATA33Q96N06 139 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 PDGFCQ9NRA1 345 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 PKD2L1Q9P0L9 805 aa17.23■□□□□ 0.35
AFF3-205ENST00000416492 ELP1O95163 1332 aa17.22■□□□□ 0.35
AFF3-205ENST00000416492 WDR64B1ANS9 1081 aa17.22■□□□□ 0.35
AFF3-205ENST00000416492 NASPP49321 788 aaPredicted RBP17.22■□□□□ 0.35
AFF3-205ENST00000416492 HAUS3Q68CZ6 603 aa17.22■□□□□ 0.35
AFF3-205ENST00000416492 CYFIP1Q7L576 1253 aa17.22■□□□□ 0.35
AFF3-205ENST00000416492 PCSK9Q8NBP7 692 aaKnown RBP17.22■□□□□ 0.35
AFF3-205ENST00000416492 PPTC7Q8NI37 304 aa17.22■□□□□ 0.35
AFF3-205ENST00000416492 TNPO1Q92973 898 aaKnown RBP17.22■□□□□ 0.35
AFF3-205ENST00000416492 PAK6Q9NQU5 681 aaPredicted RBP17.22■□□□□ 0.35
AFF3-205ENST00000416492 SAMM50Q9Y512 469 aa17.22■□□□□ 0.35
AFF3-205ENST00000416492 DDX49Q9Y6V7 483 aaKnown RBP17.22■□□□□ 0.35
AFF3-205ENST00000416492 FARP2O94887 1054 aaPredicted RBP17.21■□□□□ 0.35
AFF3-205ENST00000416492 TXLNAP40222 546 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 TXKP42681 527 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 GJA9P57773 515 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 PPP2R5CQ13362 524 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 DGKDQ16760 1214 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 MIS18BP1Q6P0N0 1132 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 TRPV1Q8NER1 839 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 NEK9Q8TD19 979 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 SPATA32Q96LK8 384 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 AK8Q96MA6 479 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 GBP4Q96PP9 640 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 USP28Q96RU2 1077 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 UNC93B1Q9H1C4 597 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 UPF3AQ9H1J1 476 aaKnown RBP17.21■□□□□ 0.35
AFF3-205ENST00000416492 AZI2Q9H6S1 392 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 TTC12Q9H892 705 aaPredicted RBP17.21■□□□□ 0.35
AFF3-205ENST00000416492 ZNF215Q9UL58 517 aaPredicted RBP17.21■□□□□ 0.35
AFF3-205ENST00000416492 GNEQ9Y223 722 aaKnown RBP17.21■□□□□ 0.35
AFF3-205ENST00000416492 ZDHHC9Q9Y397 364 aa17.21■□□□□ 0.35
AFF3-205ENST00000416492 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.2■□□□□ 0.34
AFF3-205ENST00000416492 KBTBD13C9JR72 458 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 SPTLC2O15270 562 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 DYNC1LI2O43237 492 aaPredicted RBP17.2■□□□□ 0.34
AFF3-205ENST00000416492 PPP6R2O75170 966 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 PSMD10O75832 226 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 ARIH2O95376 493 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 PSAPP07602 524 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 GJB1P08034 283 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 C6orf222P0C671 652 aaPredicted RBP17.2■□□□□ 0.34
AFF3-205ENST00000416492 FXR2P51116 673 aaKnown RBP eCLIP17.2■□□□□ 0.34
AFF3-205ENST00000416492 CEBPZQ03701 1054 aaKnown RBP17.2■□□□□ 0.34
AFF3-205ENST00000416492 DNM1Q05193 864 aaKnown RBP17.2■□□□□ 0.34
AFF3-205ENST00000416492 ARHGAP1Q07960 439 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 SEMA3FQ13275 785 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 NBR1Q14596 966 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 SLC39A14Q15043 492 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 FAM160B1Q5W0V3 765 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 MIER3Q7Z3K6 550 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 SEPT1Q8WYJ6 367 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 MTMR9Q96QG7 549 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 KATNAL1Q9BW62 490 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 SYNRGQ9UMZ2 1314 aa17.2■□□□□ 0.34
AFF3-205ENST00000416492 FRMPD3Q5JV73 1810 aa17.19■□□□□ 0.34
AFF3-205ENST00000416492 GOLGA6L22H0YM25 854 aa17.19■□□□□ 0.34
AFF3-205ENST00000416492 DDX39AO00148 427 aaKnown RBP17.19■□□□□ 0.34
AFF3-205ENST00000416492 SLC26A4O43511 780 aa17.19■□□□□ 0.34
AFF3-205ENST00000416492 CST5P28325 142 aaPredicted RBP17.19■□□□□ 0.34
AFF3-205ENST00000416492 LONP1P36776 959 aaKnown RBP17.19■□□□□ 0.34
AFF3-205ENST00000416492 ITGB3BPQ13352 177 aaPredicted RBP17.19■□□□□ 0.34
AFF3-205ENST00000416492 PDIA5Q14554 519 aa17.19■□□□□ 0.34
AFF3-205ENST00000416492 FSCN1Q16658 493 aaKnown RBP17.19■□□□□ 0.34
AFF3-205ENST00000416492 FOXD4L6Q3SYB3 417 aaPredicted RBP17.19■□□□□ 0.34
AFF3-205ENST00000416492 FAM173BQ6P4H8 233 aa17.19■□□□□ 0.34
AFF3-205ENST00000416492 FOXD4L3Q6VB84 417 aaPredicted RBP17.19■□□□□ 0.34
AFF3-205ENST00000416492 KRI1Q8N9T8 703 aaKnown RBP17.19■□□□□ 0.34
AFF3-205ENST00000416492 ATP6V0A1Q93050 837 aa17.19■□□□□ 0.34
AFF3-205ENST00000416492 DEFB118Q96PH6 123 aa17.19■□□□□ 0.34
AFF3-205ENST00000416492 PCDHA10Q9Y5I2 948 aa17.19■□□□□ 0.34
AFF3-205ENST00000416492 CLIC4Q9Y696 253 aa17.19■□□□□ 0.34
AFF3-205ENST00000416492 GOLGA6L4A6NEF3 574 aa17.18■□□□□ 0.34
AFF3-205ENST00000416492 MOXD2PA6NHM9 499 aa17.18■□□□□ 0.34
AFF3-205ENST00000416492 CHMP2AO43633 222 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms