RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 ESPNB1AK53 854 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 MEIS2O14770 477 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 NKRFO15226 690 aaKnown RBP eCLIP10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 TLR3O15455 904 aaKnown RBP10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 PPP6R2O75170 966 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 NR1I2O75469 434 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 CABYRO75952 493 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 SYN1P17600 705 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 MCM7P33993 719 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 TRAPPC10P48553 1259 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 ACLYP53396 1101 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 GJA9P57773 515 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 RPS6P62753 249 aaKnown RBP10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 NONOQ15233 471 aaKnown RBP eCLIP10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 ARHGEF16Q5VV41 709 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 ADALQ6DHV7 355 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 SLC30A10Q6XR72 485 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 TLK2Q86UE8 772 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 NSUN6Q8TEA1 469 aaKnown RBP10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 SEZ6LQ9BYH1 1024 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 A0A1W2PQ27 194 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 A0A1W2PQ45 241 aaPredicted RBP10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 A0A1W2PQ64 194 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 A0A1W2PQD8 194 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 A0A1W2PQY0 241 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 CFBP00751 764 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 CST5P28325 142 aaPredicted RBP10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 CPT1AP50416 773 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 KCNA10Q16322 511 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 ZSCAN23Q3MJ62 389 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 C1orf53Q5VUE5 145 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 SHC4Q6S5L8 630 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 FBXO16Q8IX29 292 aaPredicted RBP10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 C4orf32Q8N8J7 132 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 FSIP1Q8NA03 581 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 TBCKQ8TEA7 893 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 CLEC4DQ8WXI8 215 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 TBC1D5Q92609 795 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 IWS1Q96ST2 819 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 UBE2OQ9C0C9 1292 aaKnown RBP10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 DACT1Q9NYF0 836 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 PRDM4Q9UKN5 801 aa10.44□□□□□ -0.74
CHRNA1-206ENST00000416004 A0A1B0GVL5 298 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 DYNC1LI2O43237 492 aaPredicted RBP10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 ADAMTS4O75173 837 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 HOXA13P31271 388 aaPredicted RBP10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 ATP2C1P98194 919 aaPredicted RBP10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 PTGDRQ13258 359 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 SNW1Q13573 536 aaKnown RBP10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 TTLL4Q14679 1199 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 STXBP2Q15833 593 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 IL17AQ16552 155 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 SPECC1Q5M775 1068 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 KRI1Q8N9T8 703 aaKnown RBP10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 ENGASEQ8NFI3 743 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 SCFD2Q8WU76 684 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 RMDN3Q96TC7 470 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 WDR11Q9BZH6 1224 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 UPF3AQ9H1J1 476 aaKnown RBP10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 TMEM60Q9H2L4 133 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 LRRC37A2A6NM11 1700 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 LCTP09848 1927 aa10.43□□□□□ -0.74
CHRNA1-206ENST00000416004 A0A0U1RQG5 324 aaPredicted RBP10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 ASGR1P07306 291 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 BMP8BP34820 402 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 NDUFA8P51970 172 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 FSCN1Q16658 493 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 LETM2Q2VYF4 491 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 TRIM60Q495X7 471 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 MTERF4Q7Z6M4 381 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 NEK8Q86SG6 692 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 MORC4Q8TE76 937 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 MRPS27Q92552 414 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 LENG1Q96BZ8 264 aaPredicted RBP10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 FGD4Q96M96 766 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 SRPRBQ9Y5M8 271 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 MORC2Q9Y6X9 1032 aaPredicted RBP10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 GCOM1H8Y6P7 765 aaPredicted RBP10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 PQBP1O60828 265 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 CUTAO60888 179 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 TDP2O95551 362 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 CLTBP09497 229 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 POLR2MP0CAP2 368 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 CMA1P23946 247 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 RBM10P98175 930 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 DUSP28Q4G0W2 176 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 CCDC183Q5T5S1 534 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 RESP18Q5W5W9 173 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 USP49Q70CQ1 688 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 FMR1NBQ8N0W7 255 aaPredicted RBP10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 KLHDC9Q8NEP7 349 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 OR6J1Q8NGC5 347 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 CSRNP2Q9H175 543 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 CEP131Q9UPN4 1083 aa10.42□□□□□ -0.74
CHRNA1-206ENST00000416004 MKI67P46013 3256 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-206ENST00000416004 CEP290O15078 2479 aa10.41□□□□□ -0.74
CHRNA1-206ENST00000416004 SYCE3A1L190 88 aa10.41□□□□□ -0.74
CHRNA1-206ENST00000416004 CCNT1O60563 726 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-206ENST00000416004 KPNA6O60684 536 aa10.41□□□□□ -0.74
CHRNA1-206ENST00000416004 TXNP10599 105 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms