RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 XIRP2A4UGR9 3374 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 A0A1W2PPC1 479 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 IMPDH2P12268 514 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 TNK2Q07912 1038 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 FZD5Q13467 585 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 ZNF124Q15973 351 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 KCNMB1Q16558 191 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 USP50Q70EL3 339 aaPredicted RBP7.06□□□□□ -1.28
CSTF1-202ENST00000415828 CNNM2Q9H8M5 875 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 ZSWIM5Q9P217 1185 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 STAP2Q9UGK3 403 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 ZNRF3Q9ULT6 936 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 DCHS1Q96JQ0 3298 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 ZNF646O15015 1829 aaPredicted RBP7.06□□□□□ -1.28
CSTF1-202ENST00000415828 CFAP47Q6ZTR5 3102 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 FARP2O94887 1054 aaPredicted RBP7.05□□□□□ -1.28
CSTF1-202ENST00000415828 UBOX5O94941 541 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 SERPINB2P05120 415 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 NME1P15531 152 aaKnown RBP7.05□□□□□ -1.28
CSTF1-202ENST00000415828 FYB2Q5VWT5 728 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 CDCP2Q5VXM1 449 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 OTOP1Q7RTM1 612 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 NPM2Q86SE8 214 aaKnown RBP7.05□□□□□ -1.28
CSTF1-202ENST00000415828 RNF141Q8WVD5 230 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 CPLX3Q8WVH0 158 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 ARMC5Q96C12 935 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 SPATA32Q96LK8 384 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 Q96M66 194 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 CRBNQ96SW2 442 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 KRTAP4-9Q9BYQ8 210 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 KCNH3Q9ULD8 1083 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 TRIM17Q9Y577 477 aa7.05□□□□□ -1.28
CSTF1-202ENST00000415828 PCDH11XQ9BZA7 1347 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 PCDH11YQ9BZA8 1340 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 UNC79Q9P2D8 2635 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 ZNF503-AS2A6NEH8 195 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 MEIS3P2A8K0S8 358 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 FKTNO75072 461 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 AFMP43652 599 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 GJA8P48165 433 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 NASPP49321 788 aaPredicted RBP7.04□□□□□ -1.28
CSTF1-202ENST00000415828 JAG1P78504 1218 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 CAP1Q01518 475 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 COL9A2Q14055 689 aaPredicted RBP7.04□□□□□ -1.28
CSTF1-202ENST00000415828 NBPF6Q5VWK0 638 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 THAP5Q7Z6K1 395 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 ZNF512BQ96KM6 892 aaPredicted RBP7.04□□□□□ -1.28
CSTF1-202ENST00000415828 NBPF4Q96M43 638 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 CAPN10Q9HC96 672 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 C19orf73Q9NVV2 129 aa7.04□□□□□ -1.28
CSTF1-202ENST00000415828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.04□□□□□ -1.28
CSTF1-202ENST00000415828 LAMB1P07942 1786 aa7.03□□□□□ -1.28
CSTF1-202ENST00000415828 LRRC10BA6NIK2 292 aa7.03□□□□□ -1.28
CSTF1-202ENST00000415828 RASAL3Q86YV0 1011 aa7.03□□□□□ -1.28
CSTF1-202ENST00000415828 DTWD2Q8NBA8 298 aa7.03□□□□□ -1.28
CSTF1-202ENST00000415828 RASGRP4Q8TDF6 673 aa7.03□□□□□ -1.28
CSTF1-202ENST00000415828 IP6K1Q92551 441 aa7.03□□□□□ -1.28
CSTF1-202ENST00000415828 ASPNQ9BXN1 380 aa7.03□□□□□ -1.28
CSTF1-202ENST00000415828 TTC21AQ8NDW8 1320 aa7.02□□□□□ -1.28
CSTF1-202ENST00000415828 WASH4PA8MWX3 477 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 CLEC3AO75596 197 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 FBLN1P23142 703 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 IARSP41252 1262 aaKnown RBP7.02□□□□□ -1.29
CSTF1-202ENST00000415828 CRKLP46109 303 aaKnown RBP7.02□□□□□ -1.29
CSTF1-202ENST00000415828 SOX9P48436 509 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 EIF6P56537 245 aaKnown RBP7.02□□□□□ -1.29
CSTF1-202ENST00000415828 RNF4P78317 190 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 MLANAQ16655 118 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 RUFY4Q6ZNE9 571 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 NME9Q86XW9 330 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 PIWIL2Q8TC59 973 aaKnown RBP7.02□□□□□ -1.29
CSTF1-202ENST00000415828 LIN37Q96GY3 246 aaPredicted RBP7.02□□□□□ -1.29
CSTF1-202ENST00000415828 KIRREL1Q96J84 757 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 ZNF333Q96JL9 665 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 SLC9A7Q96T83 725 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 P2RX7Q99572 595 aaKnown RBP7.02□□□□□ -1.29
CSTF1-202ENST00000415828 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.02□□□□□ -1.29
CSTF1-202ENST00000415828 TMOD3Q9NYL9 352 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 PGAP2Q9UHJ9 254 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 PTPN22Q9Y2R2 807 aa7.02□□□□□ -1.29
CSTF1-202ENST00000415828 MRC1P22897 1456 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.01□□□□□ -1.29
CSTF1-202ENST00000415828 TNFRSF10CO14798 259 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 GDNFP39905 211 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 LSRQ86X29 649 aaPredicted RBP7.01□□□□□ -1.29
CSTF1-202ENST00000415828 KSR1Q8IVT5 923 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.01□□□□□ -1.29
CSTF1-202ENST00000415828 SHISA4Q96DD7 197 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 SLC6A18Q96N87 628 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 ALPK1Q96QP1 1244 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 SRRTQ9BXP5 876 aaKnown RBP7.01□□□□□ -1.29
CSTF1-202ENST00000415828 MKRN2Q9H000 416 aaKnown RBP7.01□□□□□ -1.29
CSTF1-202ENST00000415828 TRIT1Q9H3H1 467 aaKnown RBP7.01□□□□□ -1.29
CSTF1-202ENST00000415828 GBA2Q9HCG7 927 aaPredicted RBP7.01□□□□□ -1.29
CSTF1-202ENST00000415828 GPATCH2Q9NW75 528 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 FAM53CQ9NYF3 392 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 SLAMF8Q9P0V8 285 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 MAP3K19Q56UN5 1328 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 IRS2Q9Y4H2 1338 aa7.01□□□□□ -1.29
CSTF1-202ENST00000415828 CHD6Q8TD26 2715 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms