RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 CKBP12277 381 aa28.66■■■□□ 2.18
HLA-C-204ENST00000415537 RCAN1P53805 252 aa28.66■■■□□ 2.18
HLA-C-204ENST00000415537 NAPAP54920 295 aa28.66■■■□□ 2.18
HLA-C-204ENST00000415537 WWC2Q6AWC2 1192 aa28.66■■■□□ 2.18
HLA-C-204ENST00000415537 BLOC1S2Q6QNY1 142 aa28.66■■■□□ 2.18
HLA-C-204ENST00000415537 GPRASP2Q96D09 838 aa28.66■■■□□ 2.18
HLA-C-204ENST00000415537 NKX2-4Q9H2Z4 354 aa28.66■■■□□ 2.18
HLA-C-204ENST00000415537 CDH23Q9H251 3354 aa28.65■■■□□ 2.18
HLA-C-204ENST00000415537 CPA1P15085 419 aa28.65■■■□□ 2.18
HLA-C-204ENST00000415537 RABGGTBP53611 331 aa28.65■■■□□ 2.18
HLA-C-204ENST00000415537 RBL2Q08999 1139 aa28.65■■■□□ 2.18
HLA-C-204ENST00000415537 GPR20Q99678 358 aa28.65■■■□□ 2.18
HLA-C-204ENST00000415537 SNX14Q9Y5W7 946 aa28.65■■■□□ 2.18
HLA-C-204ENST00000415537 TET1Q8NFU7 2136 aa28.64■■■□□ 2.18
HLA-C-204ENST00000415537 CCDC196A0A1B0GTZ2 297 aa28.64■■■□□ 2.18
HLA-C-204ENST00000415537 C17orf102A2RUQ5 167 aa28.64■■■□□ 2.18
HLA-C-204ENST00000415537 hCG_1984214I3L0E3 225 aa28.64■■■□□ 2.18
HLA-C-204ENST00000415537 METAP2P50579 478 aaKnown RBP eCLIP28.64■■■□□ 2.18
HLA-C-204ENST00000415537 ZNF200P98182 395 aaPredicted RBP28.64■■■□□ 2.18
HLA-C-204ENST00000415537 SP4Q02446 784 aa28.64■■■□□ 2.18
HLA-C-204ENST00000415537 Q6ZUG5 572 aa28.64■■■□□ 2.18
HLA-C-204ENST00000415537 ZNF713Q8N859 430 aaPredicted RBP28.64■■■□□ 2.18
HLA-C-204ENST00000415537 GAS2L1Q99501 681 aaPredicted RBP28.64■■■□□ 2.18
HLA-C-204ENST00000415537 ZNF215Q9UL58 517 aaPredicted RBP28.64■■■□□ 2.18
HLA-C-204ENST00000415537 PCDHA11Q9Y5I1 949 aa28.64■■■□□ 2.18
HLA-C-204ENST00000415537 PPP1R18Q6NYC8 613 aa28.63■■■□□ 2.17
HLA-C-204ENST00000415537 SLC9A7Q96T83 725 aa28.63■■■□□ 2.17
HLA-C-204ENST00000415537 YBX2Q9Y2T7 364 aaKnown RBP28.63■■■□□ 2.17
HLA-C-204ENST00000415537 BAIAP3O94812 1187 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 PSMA5P28066 241 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 CDC27P30260 824 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 ADCY7P51828 1080 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 APOBRQ0VD83 1088 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 FUT2Q10981 343 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 MTMR1Q13613 665 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 UTP14CQ5TAP6 766 aaKnown RBP28.62■■■□□ 2.17
HLA-C-204ENST00000415537 TEX2Q8IWB9 1127 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 PHOSPHO2Q8TCD6 241 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 BRF1Q92994 677 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 ATP6V0A1Q93050 837 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 RIC8AQ9NPQ8 531 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 MYO9BQ13459 2157 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 KAT6AQ92794 2004 aa28.62■■■□□ 2.17
HLA-C-204ENST00000415537 SMIM10L2AP0DMW4 78 aa28.61■■■□□ 2.17
HLA-C-204ENST00000415537 SMIM10L2BP0DMW5 78 aa28.61■■■□□ 2.17
HLA-C-204ENST00000415537 ITGB5P18084 799 aa28.61■■■□□ 2.17
HLA-C-204ENST00000415537 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.61■■■□□ 2.17
HLA-C-204ENST00000415537 GLT8D2Q9H1C3 349 aa28.61■■■□□ 2.17
HLA-C-204ENST00000415537 FAM217BQ9NTX9 383 aaPredicted RBP28.61■■■□□ 2.17
HLA-C-204ENST00000415537 UBIAD1Q9Y5Z9 338 aa28.61■■■□□ 2.17
HLA-C-204ENST00000415537 SMCO2A6NFE2 343 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 MAFGO15525 162 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 ATP9AO75110 1047 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 FOSP01100 380 aaPredicted RBP28.6■■■□□ 2.17
HLA-C-204ENST00000415537 GNAT1P11488 350 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 ADD1P35611 737 aaKnown RBP28.6■■■□□ 2.17
HLA-C-204ENST00000415537 KCNJ6P48051 423 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 HIC1Q14526 733 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 ZNF618Q5T7W0 954 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 PPP2R2DQ66LE6 453 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 RNPEPQ9H4A4 650 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 PRDM12Q9H4Q4 367 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 JADE2Q9NQC1 790 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 BARHL2Q9NY43 387 aa28.6■■■□□ 2.17
HLA-C-204ENST00000415537 STXBP3O00186 592 aa28.59■■■□□ 2.17
HLA-C-204ENST00000415537 MYOGP15173 224 aa28.59■■■□□ 2.17
HLA-C-204ENST00000415537 KCNA2P16389 499 aa28.59■■■□□ 2.17
HLA-C-204ENST00000415537 TRIM71Q2Q1W2 868 aaKnown RBP28.59■■■□□ 2.17
HLA-C-204ENST00000415537 TYW1BQ6NUM6 668 aa28.59■■■□□ 2.17
HLA-C-204ENST00000415537 CNKSR3Q6P9H4 555 aa28.59■■■□□ 2.17
HLA-C-204ENST00000415537 SERINC5Q86VE9 423 aa28.59■■■□□ 2.17
HLA-C-204ENST00000415537 KIF28PB7ZC32 967 aa28.58■■■□□ 2.17
HLA-C-204ENST00000415537 DLL1O00548 723 aa28.58■■■□□ 2.17
HLA-C-204ENST00000415537 NBNO60934 754 aa28.58■■■□□ 2.17
HLA-C-204ENST00000415537 RPS6KB1P23443 525 aa28.58■■■□□ 2.17
HLA-C-204ENST00000415537 TCF7P36402 384 aaPredicted RBP28.58■■■□□ 2.17
HLA-C-204ENST00000415537 THPOP40225 353 aa28.58■■■□□ 2.17
HLA-C-204ENST00000415537 GPNMBQ14956 572 aa28.58■■■□□ 2.17
HLA-C-204ENST00000415537 TRIM50Q86XT4 487 aa28.58■■■□□ 2.17
HLA-C-204ENST00000415537 SEPT1Q8WYJ6 367 aa28.58■■■□□ 2.17
HLA-C-204ENST00000415537 WNT8BQ93098 351 aa28.58■■■□□ 2.17
HLA-C-204ENST00000415537 PKD2L1Q9P0L9 805 aa28.58■■■□□ 2.17
HLA-C-204ENST00000415537 TREHO43280 583 aa28.57■■■□□ 2.16
HLA-C-204ENST00000415537 CXCL10P02778 98 aa28.57■■■□□ 2.16
HLA-C-204ENST00000415537 TELO2Q9Y4R8 837 aa28.57■■■□□ 2.16
HLA-C-204ENST00000415537 EPB41L2O43491 1005 aaKnown RBP28.56■■■□□ 2.16
HLA-C-204ENST00000415537 HOXC8P31273 242 aa28.56■■■□□ 2.16
HLA-C-204ENST00000415537 PFKFB3Q16875 520 aaPredicted RBP28.56■■■□□ 2.16
HLA-C-204ENST00000415537 FBXL16Q8N461 479 aa28.56■■■□□ 2.16
HLA-C-204ENST00000415537 PGBD1Q96JS3 809 aa28.56■■■□□ 2.16
HLA-C-204ENST00000415537 MXRA8Q9BRK3 442 aa28.56■■■□□ 2.16
HLA-C-204ENST00000415537 ANO3Q9BYT9 981 aa28.56■■■□□ 2.16
HLA-C-204ENST00000415537 SETD4Q9NVD3 440 aa28.56■■■□□ 2.16
HLA-C-204ENST00000415537 EMSYQ7Z589 1322 aa28.55■■■□□ 2.16
HLA-C-204ENST00000415537 RSPH10B2B2RC85 870 aa28.55■■■□□ 2.16
HLA-C-204ENST00000415537 RSPH10BP0C881 870 aa28.55■■■□□ 2.16
HLA-C-204ENST00000415537 SCG2P13521 617 aa28.55■■■□□ 2.16
HLA-C-204ENST00000415537 AP3B2Q13367 1082 aa28.55■■■□□ 2.16
HLA-C-204ENST00000415537 HERC6Q8IVU3 1022 aa28.55■■■□□ 2.16
HLA-C-204ENST00000415537 EYSQ5T1H1 3165 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms