RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 GPRASP2Q96D09 838 aa30.15■■■□□ 2.42
VEGFA-207ENST00000413642 KATNAL1Q9BW62 490 aa30.15■■■□□ 2.42
VEGFA-207ENST00000413642 TM6SF1Q9BZW5 370 aa30.15■■■□□ 2.42
VEGFA-207ENST00000413642 GRXCR1A8MXD5 290 aa30.14■■■□□ 2.42
VEGFA-207ENST00000413642 NOP56O00567 594 aaKnown RBP30.14■■■□□ 2.42
VEGFA-207ENST00000413642 LGALS2P05162 132 aa30.14■■■□□ 2.42
VEGFA-207ENST00000413642 OTOP2Q7RTS6 562 aa30.14■■■□□ 2.42
VEGFA-207ENST00000413642 DEFB128Q7Z7B8 93 aa30.14■■■□□ 2.42
VEGFA-207ENST00000413642 ANO3Q9BYT9 981 aa30.14■■■□□ 2.42
VEGFA-207ENST00000413642 KCNA2P16389 499 aa30.13■■■□□ 2.41
VEGFA-207ENST00000413642 TRIM50Q86XT4 487 aa30.13■■■□□ 2.41
VEGFA-207ENST00000413642 RETREG2Q8NC44 543 aa30.13■■■□□ 2.41
VEGFA-207ENST00000413642 CYP2W1Q8TAV3 490 aa30.13■■■□□ 2.41
VEGFA-207ENST00000413642 HERVK_113Q902F9 699 aa30.13■■■□□ 2.41
VEGFA-207ENST00000413642 SENP7Q9BQF6 1050 aa30.13■■■□□ 2.41
VEGFA-207ENST00000413642 JADE2Q9NQC1 790 aa30.13■■■□□ 2.41
VEGFA-207ENST00000413642 HSFX4A0A1B0GTS1 333 aaPredicted RBP30.12■■■□□ 2.41
VEGFA-207ENST00000413642 HSFX3A0A1B0GWH4 333 aaPredicted RBP30.12■■■□□ 2.41
VEGFA-207ENST00000413642 IQCF3P0C7M6 154 aa30.12■■■□□ 2.41
VEGFA-207ENST00000413642 CLK2P49760 499 aaKnown RBP30.12■■■□□ 2.41
VEGFA-207ENST00000413642 UTP14CQ5TAP6 766 aaKnown RBP30.12■■■□□ 2.41
VEGFA-207ENST00000413642 JAKMIP3Q5VZ66 844 aa30.12■■■□□ 2.41
VEGFA-207ENST00000413642 SLC26A6Q9BXS9 759 aa30.12■■■□□ 2.41
VEGFA-207ENST00000413642 PDRG1Q9NUG6 133 aa30.12■■■□□ 2.41
VEGFA-207ENST00000413642 H3BRB1 525 aa30.11■■■□□ 2.41
VEGFA-207ENST00000413642 BFSP2Q13515 415 aa30.11■■■□□ 2.41
VEGFA-207ENST00000413642 MTMR1Q13613 665 aa30.11■■■□□ 2.41
VEGFA-207ENST00000413642 WNT8BQ93098 351 aa30.11■■■□□ 2.41
VEGFA-207ENST00000413642 TUT1Q9H6E5 874 aaKnown RBP30.11■■■□□ 2.41
VEGFA-207ENST00000413642 EHMT1Q9H9B1 1298 aa30.11■■■□□ 2.41
VEGFA-207ENST00000413642 PITPNM1O00562 1244 aa30.1■■■□□ 2.41
VEGFA-207ENST00000413642 FOSP01100 380 aaPredicted RBP30.1■■■□□ 2.41
VEGFA-207ENST00000413642 IFNAR1P17181 557 aa30.1■■■□□ 2.41
VEGFA-207ENST00000413642 ZNF697Q5TEC3 545 aa30.1■■■□□ 2.41
VEGFA-207ENST00000413642 RPUSD2Q8IZ73 545 aaKnown RBP30.1■■■□□ 2.41
VEGFA-207ENST00000413642 GUCD1Q96NT3 240 aa30.1■■■□□ 2.41
VEGFA-207ENST00000413642 MXRA8Q9BRK3 442 aa30.1■■■□□ 2.41
VEGFA-207ENST00000413642 TTYH1Q9H313 450 aaPredicted RBP30.1■■■□□ 2.41
VEGFA-207ENST00000413642 STK3Q13188 491 aa30.09■■■□□ 2.41
VEGFA-207ENST00000413642 CDHR1Q96JP9 859 aa30.09■■■□□ 2.41
VEGFA-207ENST00000413642 MYH7BA7E2Y1 1941 aa30.08■■■□□ 2.41
VEGFA-207ENST00000413642 SMIM10L2AP0DMW4 78 aa30.08■■■□□ 2.41
VEGFA-207ENST00000413642 SMIM10L2BP0DMW5 78 aa30.08■■■□□ 2.41
VEGFA-207ENST00000413642 ARP10275 920 aa30.08■■■□□ 2.41
VEGFA-207ENST00000413642 PBX2P40425 430 aa30.08■■■□□ 2.41
VEGFA-207ENST00000413642 AKAP17AQ02040 695 aaKnown RBP30.08■■■□□ 2.41
VEGFA-207ENST00000413642 RNF26Q9BY78 433 aaPredicted RBP30.08■■■□□ 2.41
VEGFA-207ENST00000413642 ZMYND12Q9H0C1 365 aa30.08■■■□□ 2.41
VEGFA-207ENST00000413642 SEMA6BQ9H3T3 888 aa30.08■■■□□ 2.41
VEGFA-207ENST00000413642 GSTTP1A0A1W2PQM5 241 aa30.07■■■□□ 2.4
VEGFA-207ENST00000413642 SREBF1P36956 1147 aa30.07■■■□□ 2.4
VEGFA-207ENST00000413642 AP3B2Q13367 1082 aa30.07■■■□□ 2.4
VEGFA-207ENST00000413642 GPNMBQ14956 572 aa30.07■■■□□ 2.4
VEGFA-207ENST00000413642 TRIM71Q2Q1W2 868 aaKnown RBP30.07■■■□□ 2.4
VEGFA-207ENST00000413642 GIMAP8Q8ND71 665 aaPredicted RBP30.07■■■□□ 2.4
VEGFA-207ENST00000413642 ZNF274Q96GC6 653 aaPredicted RBP30.07■■■□□ 2.4
VEGFA-207ENST00000413642 GLT8D2Q9H1C3 349 aa30.07■■■□□ 2.4
VEGFA-207ENST00000413642 KCNH7Q9NS40 1196 aa30.07■■■□□ 2.4
VEGFA-207ENST00000413642 ESYT2A0FGR8 921 aa30.06■■■□□ 2.4
VEGFA-207ENST00000413642 SEC24BO95487 1268 aa30.06■■■□□ 2.4
VEGFA-207ENST00000413642 TCF7P36402 384 aaPredicted RBP30.06■■■□□ 2.4
VEGFA-207ENST00000413642 PTK7Q13308 1070 aa30.06■■■□□ 2.4
VEGFA-207ENST00000413642 TEX2Q8IWB9 1127 aa30.06■■■□□ 2.4
VEGFA-207ENST00000413642 CAGE1Q8TC20 777 aa30.06■■■□□ 2.4
VEGFA-207ENST00000413642 RASGRP4Q8TDF6 673 aa30.06■■■□□ 2.4
VEGFA-207ENST00000413642 RNPEPQ9H4A4 650 aa30.06■■■□□ 2.4
VEGFA-207ENST00000413642 C6orf50Q9HD87 102 aa30.06■■■□□ 2.4
VEGFA-207ENST00000413642 VPS54Q9P1Q0 977 aa30.06■■■□□ 2.4
VEGFA-207ENST00000413642 C17orf102A2RUQ5 167 aa30.05■■■□□ 2.4
VEGFA-207ENST00000413642 ZBBXA8MT70 800 aa30.05■■■□□ 2.4
VEGFA-207ENST00000413642 DTNBO60941 627 aa30.05■■■□□ 2.4
VEGFA-207ENST00000413642 CKBP12277 381 aa30.05■■■□□ 2.4
VEGFA-207ENST00000413642 DNAJB2P25686 324 aa30.05■■■□□ 2.4
VEGFA-207ENST00000413642 ARHGAP4P98171 946 aa30.05■■■□□ 2.4
VEGFA-207ENST00000413642 CEP55Q53EZ4 464 aa30.05■■■□□ 2.4
VEGFA-207ENST00000413642 CCDC155Q8N6L0 562 aa30.05■■■□□ 2.4
VEGFA-207ENST00000413642 AFAP1L1Q8TED9 768 aa30.05■■■□□ 2.4
VEGFA-207ENST00000413642 PBX4Q9BYU1 374 aa30.05■■■□□ 2.4
VEGFA-207ENST00000413642 FTOQ9C0B1 505 aaKnown RBP eCLIP30.05■■■□□ 2.45e-19■□□□□ 10.1
VEGFA-207ENST00000413642 MAFGO15525 162 aa30.04■■■□□ 2.4
VEGFA-207ENST00000413642 SELPP16109 830 aa30.04■■■□□ 2.4
VEGFA-207ENST00000413642 RFC2P35250 354 aa30.04■■■□□ 2.4
VEGFA-207ENST00000413642 LRRC8DQ7L1W4 858 aa30.04■■■□□ 2.4
VEGFA-207ENST00000413642 SEPT1Q8WYJ6 367 aa30.04■■■□□ 2.4
VEGFA-207ENST00000413642 UIMC1Q96RL1 719 aa30.04■■■□□ 2.4
VEGFA-207ENST00000413642 SETD4Q9NVD3 440 aa30.04■■■□□ 2.4
VEGFA-207ENST00000413642 TREHO43280 583 aa30.03■■■□□ 2.4
VEGFA-207ENST00000413642 HOXC8P31273 242 aa30.03■■■□□ 2.4
VEGFA-207ENST00000413642 RBL2Q08999 1139 aa30.03■■■□□ 2.4
VEGFA-207ENST00000413642 ITGB3BPQ13352 177 aaPredicted RBP30.03■■■□□ 2.4
VEGFA-207ENST00000413642 ZNF618Q5T7W0 954 aa30.03■■■□□ 2.4
VEGFA-207ENST00000413642 TRAF7Q6Q0C0 670 aa30.03■■■□□ 2.4
VEGFA-207ENST00000413642 CCDC12Q8WUD4 166 aaPredicted RBP30.03■■■□□ 2.4
VEGFA-207ENST00000413642 ATP6V0A1Q93050 837 aa30.03■■■□□ 2.4
VEGFA-207ENST00000413642 MTIF3Q9H2K0 278 aaKnown RBP30.03■■■□□ 2.4
VEGFA-207ENST00000413642 AGO4Q9HCK5 861 aaKnown RBP30.03■■■□□ 2.4
VEGFA-207ENST00000413642 DOCK5Q9H7D0 1870 aa30.02■■■□□ 2.4
VEGFA-207ENST00000413642 FAM86B1E9PN63 330 aa30.02■■■□□ 2.4
VEGFA-207ENST00000413642 MEIS1O00470 390 aa30.02■■■□□ 2.4
VEGFA-207ENST00000413642 PFKMP08237 780 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms