RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 PBX2P40425 430 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 SMAD3P84022 425 aaKnown RBP11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 BFSP2Q13515 415 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 MTMR1Q13613 665 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 PKN1Q16512 942 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 ZNF697Q5TEC3 545 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 PSRC1Q6PGN9 363 aaPredicted RBP11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 METTL7BQ6UX53 244 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 TRIM50Q86XT4 487 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 DHX38Q92620 1227 aaKnown RBP11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 VWCEQ96DN2 955 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 CTAGE1Q96RT6 745 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 ANO3Q9BYT9 981 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 AGXT2Q9BYV1 514 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 SEMA6BQ9H3T3 888 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 TUT1Q9H6E5 874 aaKnown RBP11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 EHMT1Q9H9B1 1298 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 JADE2Q9NQC1 790 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 LAMA3Q16787 3333 aa11.65□□□□□ -0.54
NCKIPSD-202ENST00000413374 C17orf102A2RUQ5 167 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 EPB41L2O43491 1005 aaKnown RBP11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 HOXD8P13378 290 aaPredicted RBP11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 KCNA2P16389 499 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 RABGGTBP53611 331 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 RCAN1P53805 252 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 NTRK3Q16288 839 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 PPP1R18Q6NYC8 613 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 SESTD1Q86VW0 696 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 FBXL16Q8N461 479 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 RASGRP4Q8TDF6 673 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 HERVK_113Q902F9 699 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 WNT8BQ93098 351 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 GPRASP2Q96D09 838 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 GUCD1Q96NT3 240 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 SENP7Q9BQF6 1050 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 MXRA8Q9BRK3 442 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 TM6SF1Q9BZW5 370 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 TTYH1Q9H313 450 aaPredicted RBP11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 RNPEPQ9H4A4 650 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 SETD4Q9NVD3 440 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 VPS54Q9P1Q0 977 aa11.64□□□□□ -0.55
NCKIPSD-202ENST00000413374 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 GSTTP1A0A1W2PQM5 241 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 hCG_1984214I3L0E3 225 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 TREHO43280 583 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 SEC24BO95487 1268 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 FOSP01100 380 aaPredicted RBP11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 SMIM10L2AP0DMW4 78 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 SMIM10L2BP0DMW5 78 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 CKBP12277 381 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 MARK3P27448 753 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 TCF7P36402 384 aaPredicted RBP11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 CLK2P49760 499 aaKnown RBP11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 SSRP1Q08945 709 aaKnown RBP11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 RASIP1Q5U651 963 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 ZNF713Q8N859 430 aaPredicted RBP11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 GIMAP8Q8ND71 665 aaPredicted RBP11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 SEPT1Q8WYJ6 367 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 ATP6V0A1Q93050 837 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 CDHR1Q96JP9 859 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 CDX2Q99626 313 aaPredicted RBP11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 PBX4Q9BYU1 374 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 C6orf50Q9HD87 102 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 KCNH7Q9NS40 1196 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 SLC4A7Q9Y6M7 1214 aa11.63□□□□□ -0.55
NCKIPSD-202ENST00000413374 DDX39AO00148 427 aaKnown RBP11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 CPLX1O14810 134 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 MYOGP15173 224 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 SELPP16109 830 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 IFNAR1P17181 557 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 DNAJB2P25686 324 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 THPOP40225 353 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 EVCP57679 992 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 NLRP5P59047 1200 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 ARHGAP4P98171 946 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 PTK7Q13308 1070 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 GPNMBQ14956 572 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 CEP55Q53EZ4 464 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 ZNF618Q5T7W0 954 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 LRRC8DQ7L1W4 858 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 CCDC155Q8N6L0 562 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 MYLIPQ8WY64 445 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 GLG1Q92896 1179 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 TIFAQ96CG3 184 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 ZNF274Q96GC6 653 aaPredicted RBP11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 RNF26Q9BY78 433 aaPredicted RBP11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 MTIF3Q9H2K0 278 aaKnown RBP11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 NKX2-4Q9H2Z4 354 aa11.62□□□□□ -0.55
NCKIPSD-202ENST00000413374 MAFGO15525 162 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 SREBF1P36956 1147 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 AP3B2Q13367 1082 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 GRIN2CQ14957 1233 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 TCTN1Q2MV58 587 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 TRIM71Q2Q1W2 868 aaKnown RBP11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 PLA2G4DQ86XP0 818 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 CAGE1Q8TC20 777 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 AFAP1L1Q8TED9 768 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 CCDC12Q8WUD4 166 aaPredicted RBP11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 ZBTB10Q96DT7 871 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms