RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 CYFIP1Q7L576 1253 aa22.18■■□□□ 1.14
CPSF7-204ENST00000413232 SERINC5Q86VE9 423 aa22.18■■□□□ 1.14
CPSF7-204ENST00000413232 ARNTL2Q8WYA1 636 aa22.18■■□□□ 1.14
CPSF7-204ENST00000413232 RRP36Q96EU6 259 aaKnown RBP22.18■■□□□ 1.14
CPSF7-204ENST00000413232 TUT1Q9H6E5 874 aaKnown RBP22.18■■□□□ 1.14
CPSF7-204ENST00000413232 hCG_1642624A0A1W2PR95 340 aa22.17■■□□□ 1.14
CPSF7-204ENST00000413232 TLL1O43897 1013 aa22.17■■□□□ 1.14
CPSF7-204ENST00000413232 POU3F3P20264 500 aaPredicted RBP22.17■■□□□ 1.14
CPSF7-204ENST00000413232 SMARCA1P28370 1054 aa22.17■■□□□ 1.14
CPSF7-204ENST00000413232 MCM5P33992 734 aa22.17■■□□□ 1.14
CPSF7-204ENST00000413232 KCNJ6P48051 423 aa22.17■■□□□ 1.14
CPSF7-204ENST00000413232 CREB3L3Q68CJ9 461 aa22.17■■□□□ 1.14
CPSF7-204ENST00000413232 MTA3Q9BTC8 594 aa22.17■■□□□ 1.14
CPSF7-204ENST00000413232 RNPEPQ9H4A4 650 aa22.17■■□□□ 1.14
CPSF7-204ENST00000413232 KIF28PB7ZC32 967 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 PIK3CDO00329 1044 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 TREHO43280 583 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 LPXNO60711 386 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 PARNO95453 639 aaKnown RBP22.16■■□□□ 1.14
CPSF7-204ENST00000413232 SMIM10L2AP0DMW4 78 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 SMIM10L2BP0DMW5 78 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 KIF5BP33176 963 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 METTL7BQ6UX53 244 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 NFXL1Q6ZNB6 911 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 TRIM50Q86XT4 487 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 SMARCC2Q8TAQ2 1214 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 TMEM87BQ96K49 555 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 GPR20Q99678 358 aa22.16■■□□□ 1.14
CPSF7-204ENST00000413232 SIP14410 1827 aa22.15■■□□□ 1.14
CPSF7-204ENST00000413232 ABHD14A-ACY1A0A1B0GW23 586 aa22.15■■□□□ 1.14
CPSF7-204ENST00000413232 FIBPO43427 364 aa22.15■■□□□ 1.14
CPSF7-204ENST00000413232 STAM2O75886 525 aa22.15■■□□□ 1.14
CPSF7-204ENST00000413232 THPOP40225 353 aa22.15■■□□□ 1.14
CPSF7-204ENST00000413232 MRPS5P82675 430 aaKnown RBP22.15■■□□□ 1.14
CPSF7-204ENST00000413232 TFF2Q03403 129 aa22.15■■□□□ 1.14
CPSF7-204ENST00000413232 MKRN4PQ13434 485 aaPredicted RBP22.15■■□□□ 1.14
CPSF7-204ENST00000413232 GNPTABQ3T906 1256 aa22.15■■□□□ 1.14
CPSF7-204ENST00000413232 PCNX4Q63HM2 1172 aa22.15■■□□□ 1.14
CPSF7-204ENST00000413232 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.15■■□□□ 1.14
CPSF7-204ENST00000413232 CCDC82Q8N4S0 544 aa22.15■■□□□ 1.14
CPSF7-204ENST00000413232 ATP6V0A1Q93050 837 aa22.15■■□□□ 1.14
CPSF7-204ENST00000413232 C17orf102A2RUQ5 167 aa22.14■■□□□ 1.13
CPSF7-204ENST00000413232 CCDC69A6NI79 296 aa22.14■■□□□ 1.13
CPSF7-204ENST00000413232 NOP56O00567 594 aaKnown RBP22.14■■□□□ 1.13
CPSF7-204ENST00000413232 ATP9AO75110 1047 aa22.14■■□□□ 1.13
CPSF7-204ENST00000413232 GJB5O95377 273 aa22.14■■□□□ 1.13
CPSF7-204ENST00000413232 LIFRP42702 1097 aa22.14■■□□□ 1.13
CPSF7-204ENST00000413232 GRB10Q13322 594 aa22.14■■□□□ 1.13
CPSF7-204ENST00000413232 NEDD9Q14511 834 aa22.14■■□□□ 1.13
CPSF7-204ENST00000413232 DBF4BQ8NFT6 615 aa22.14■■□□□ 1.13
CPSF7-204ENST00000413232 LZTS2Q9BRK4 669 aa22.14■■□□□ 1.13
CPSF7-204ENST00000413232 SETD4Q9NVD3 440 aa22.14■■□□□ 1.13
CPSF7-204ENST00000413232 SEC63Q9UGP8 760 aaKnown RBP22.14■■□□□ 1.13
CPSF7-204ENST00000413232 RSPH10B2B2RC85 870 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 LGR5O75473 907 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 RSPH10BP0C881 870 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 GNAQP50148 359 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 SP4Q02446 784 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 IKBKEQ14164 716 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 FAM117BQ6P1L5 589 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 TMTC2Q8N394 836 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 CUL5Q93034 780 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 ZBED2Q9BTP6 218 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 USP26Q9BXU7 913 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 ANO2Q9NQ90 1003 aa22.13■■□□□ 1.13
CPSF7-204ENST00000413232 ADAM17P78536 824 aa22.12■■□□□ 1.13
CPSF7-204ENST00000413232 UBE2SQ16763 222 aa22.12■■□□□ 1.13
CPSF7-204ENST00000413232 UTP14CQ5TAP6 766 aaKnown RBP22.12■■□□□ 1.13
CPSF7-204ENST00000413232 FANCBQ8NB91 859 aa22.12■■□□□ 1.13
CPSF7-204ENST00000413232 ADAMTS19Q8TE59 1207 aa22.12■■□□□ 1.13
CPSF7-204ENST00000413232 SENP7Q9BQF6 1050 aa22.12■■□□□ 1.13
CPSF7-204ENST00000413232 PSTPIP2Q9H939 334 aa22.12■■□□□ 1.13
CPSF7-204ENST00000413232 BDP1A6H8Y1 2624 aa22.11■■□□□ 1.13
CPSF7-204ENST00000413232 TNFRSF10AO00220 468 aa22.11■■□□□ 1.13
CPSF7-204ENST00000413232 ITGB5P18084 799 aa22.11■■□□□ 1.13
CPSF7-204ENST00000413232 PLEKHG4Q58EX7 1191 aa22.11■■□□□ 1.13
CPSF7-204ENST00000413232 TMTC3Q6ZXV5 915 aa22.11■■□□□ 1.13
CPSF7-204ENST00000413232 TCEANC2Q96MN5 208 aa22.11■■□□□ 1.13
CPSF7-204ENST00000413232 NECAB3Q96P71 396 aaPredicted RBP22.11■■□□□ 1.13
CPSF7-204ENST00000413232 RAD9AQ99638 391 aa22.11■■□□□ 1.13
CPSF7-204ENST00000413232 SLC12A7Q9Y666 1083 aa22.11■■□□□ 1.13
CPSF7-204ENST00000413232 LOXHD1Q8IVV2 1947 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 LINC01553A4QN01 128 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 GTPBP6O43824 516 aaPredicted RBP22.1■■□□□ 1.13
CPSF7-204ENST00000413232 CTSHP09668 335 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 BMP1P13497 986 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 KCNA2P16389 499 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 KCNQ1P51787 676 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 SKIV2LQ15477 1246 aaKnown RBP22.1■■□□□ 1.13
CPSF7-204ENST00000413232 XRRA1Q6P2D8 792 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 SGMS1Q86VZ5 419 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 GDPD5Q8WTR4 605 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 SUGCTQ9HAC7 445 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 MTUS1Q9ULD2 1270 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 MYO7AQ13402 2215 aa22.1■■□□□ 1.13
CPSF7-204ENST00000413232 CALM1P0DP23 149 aa22.09■■□□□ 1.13
CPSF7-204ENST00000413232 CALM2P0DP24 149 aa22.09■■□□□ 1.13
CPSF7-204ENST00000413232 CALM3P0DP25 149 aa22.09■■□□□ 1.13
CPSF7-204ENST00000413232 TYW1BQ6NUM6 668 aa22.09■■□□□ 1.13
CPSF7-204ENST00000413232 MICU3Q86XE3 530 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms