RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 GTF2IRD2BQ6EKJ0 949 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 GPR155Q7Z3F1 870 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 GTF2IRD2Q86UP8 949 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 NLRP10Q86W26 655 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 C1orf210Q8IVY1 113 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 Q8N1Y9 231 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 C19orf47Q8N9M1 422 aaKnown RBP4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 PLEKHG4BQ96PX9 1271 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 RBPJLQ9UBG7 517 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 WASF3Q9UPY6 502 aa4.17□□□□□ -1.74
HMGB3P2-201ENST00000411913 TADA3O75528 432 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 DGKIO75912 1065 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 ADH4P08319 380 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 NAT2P11245 290 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 COL6A1P12109 1028 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 ACO1P21399 889 aaKnown RBP4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 KCNAB2Q13303 367 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 COL9A2Q14055 689 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 SMAD2Q15796 467 aaKnown RBP4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 TMCO4Q5TGY1 634 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 VASNQ6EMK4 673 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 VHLLQ6RSH7 139 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 FUKQ8N0W3 1084 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 ZNF513Q8N8E2 541 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 NPLOC4Q8TAT6 608 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 NEIL1Q96FI4 390 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 BCL2L13Q9BXK5 485 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 NKX2-4Q9H2Z4 354 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 MYOTQ9UBF9 498 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 PCDHGB7Q9Y5F8 929 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 TNFRSF18Q9Y5U5 241 aa4.16□□□□□ -1.74
HMGB3P2-201ENST00000411913 H7BY64 318 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 PLSCR1O15162 318 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 MEFVO15553 781 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 MAFKO60675 156 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 CSF2RBP32927 897 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 RAC3P60763 192 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 LSAMPQ13449 338 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 ZNF394Q53GI3 561 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 EMC4Q5J8M3 183 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 DPY19L2P1Q6NXN4 242 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 TRIM59Q8IWR1 403 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 OR6P1Q8NGX9 317 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 GIPC2Q8TF65 315 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 AJUBAQ96IF1 538 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 DLL4Q9NR61 685 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 GINM1Q9NU53 330 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 CLDND1Q9NY35 253 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 PCDHA2Q9Y5H9 948 aa4.15□□□□□ -1.75
HMGB3P2-201ENST00000411913 CHGBP05060 677 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 C1SP09871 688 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 ECI1P42126 302 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 GLRBP48167 497 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 GIPRP48546 466 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 USP10Q14694 798 aaKnown RBP4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 CCDC103Q8IW40 242 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 TRIM48Q8IWZ4 208 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 DTX3Q8N9I9 347 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 RCBTB1Q8NDN9 531 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 PHOSPHO1Q8TCT1 267 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 FAM89AQ96GI7 184 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 SMOC1Q9H4F8 434 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 FBXL7Q9UJT9 491 aa4.14□□□□□ -1.75
HMGB3P2-201ENST00000411913 KRIT1O00522 736 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 RAD17O75943 681 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 KNG1P01042 644 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 CKMP06732 381 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 SNRPB2P08579 225 aaKnown RBP4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 LMO1P25800 156 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 POLNQ7Z5Q5 900 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 MRGPRGQ86SM5 289 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 REXO1L1PQ8IX06 675 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 EPB41L1Q9H4G0 881 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 HSPBP1Q9NZL4 362 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 ZFP69BQ9UJL9 534 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 EFR3BQ9Y2G0 817 aa4.13□□□□□ -1.75
HMGB3P2-201ENST00000411913 ARNTLO00327 626 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 ZNF888P0CJ79 500 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 MAKP20794 623 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 HOXC12P31275 282 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 LTBRP36941 435 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 KCNJ6P48051 423 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 ZNF143P52747 638 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 MFAP1P55081 439 aaKnown RBP4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 GRIN1Q05586 938 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 CYP4F3Q08477 520 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 TUBA3CQ13748 450 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 SKIDA1Q1XH10 827 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 CCDC27Q2M243 656 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 TUBA3EQ6PEY2 450 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 Q6ZSN1 163 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 LDLRAD3Q86YD5 345 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 STPG3Q8N7X2 389 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 BTN2A2Q8WVV5 523 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 MRGPRX3Q96LB0 322 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 OR14A2Q96R54 314 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 LGR4Q9BXB1 951 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 MMRN2Q9H8L6 949 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms