RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 PRR16Q569H4 304 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 METTL7BQ6UX53 244 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 CXCL17Q6UXB2 119 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 CYFIP1Q7L576 1253 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 NEK8Q86SG6 692 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 GIMAP8Q8ND71 665 aaPredicted RBP11.44□□□□□ -0.58
TTC39A-207ENST00000411642 PPTC7Q8NI37 304 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 GLT1D1Q96MS3 346 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 SPATA33Q96N06 139 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 HTATIP2Q9BUP3 242 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 BCAS3Q9H6U6 928 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 STARD7Q9NQZ5 370 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 POLR3EQ9NVU0 708 aa11.44□□□□□ -0.58
TTC39A-207ENST00000411642 NOP56O00567 594 aaKnown RBP11.43□□□□□ -0.58
TTC39A-207ENST00000411642 TDP2O95551 362 aa11.43□□□□□ -0.58
TTC39A-207ENST00000411642 MYL3P08590 195 aa11.43□□□□□ -0.58
TTC39A-207ENST00000411642 PURAQ00577 322 aaKnown RBP11.43□□□□□ -0.58
TTC39A-207ENST00000411642 MLLT1Q03111 559 aaPredicted RBP11.43□□□□□ -0.58
TTC39A-207ENST00000411642 DGKDQ16760 1214 aa11.43□□□□□ -0.58
TTC39A-207ENST00000411642 MOXD1Q6UVY6 613 aa11.43□□□□□ -0.58
TTC39A-207ENST00000411642 LENG9Q96B70 501 aa11.43□□□□□ -0.58
TTC39A-207ENST00000411642 INTS4Q96HW7 963 aaKnown RBP11.43□□□□□ -0.58
TTC39A-207ENST00000411642 UIMC1Q96RL1 719 aa11.43□□□□□ -0.58
TTC39A-207ENST00000411642 SDF4Q9BRK5 362 aa11.43□□□□□ -0.58
TTC39A-207ENST00000411642 FOXP1Q9H334 677 aaPredicted RBP11.43□□□□□ -0.58
TTC39A-207ENST00000411642 AGO4Q9HCK5 861 aaKnown RBP11.43□□□□□ -0.58
TTC39A-207ENST00000411642 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
TTC39A-207ENST00000411642 NFASCO94856 1347 aa11.42□□□□□ -0.58
TTC39A-207ENST00000411642 H3BQV1 296 aa11.42□□□□□ -0.58
TTC39A-207ENST00000411642 IPO5O00410 1097 aaKnown RBP11.42□□□□□ -0.58
TTC39A-207ENST00000411642 CCNT1O60563 726 aaKnown RBP11.42□□□□□ -0.58
TTC39A-207ENST00000411642 KPNA6O60684 536 aa11.42□□□□□ -0.58
TTC39A-207ENST00000411642 CABYRO75952 493 aa11.42□□□□□ -0.58
TTC39A-207ENST00000411642 ITGB3BPQ13352 177 aaPredicted RBP11.42□□□□□ -0.58
TTC39A-207ENST00000411642 LRRC26Q2I0M4 334 aa11.42□□□□□ -0.58
TTC39A-207ENST00000411642 LARP1BQ659C4 914 aaKnown RBP11.42□□□□□ -0.58
TTC39A-207ENST00000411642 SLC39A5Q6ZMH5 540 aa11.42□□□□□ -0.58
TTC39A-207ENST00000411642 VTI1AQ96AJ9 217 aa11.42□□□□□ -0.58
TTC39A-207ENST00000411642 GPR20Q99678 358 aa11.42□□□□□ -0.58
TTC39A-207ENST00000411642 ZNF577Q9BSK1 485 aa11.42□□□□□ -0.58
TTC39A-207ENST00000411642 JPH1Q9HDC5 661 aaPredicted RBP11.42□□□□□ -0.58
TTC39A-207ENST00000411642 DDX25Q9UHL0 483 aaKnown RBP11.42□□□□□ -0.58
TTC39A-207ENST00000411642 ELP1O95163 1332 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 CYP3A7-CYP3A51PA0A087WV96 503 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 A0A0U1RQG5 324 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-207ENST00000411642 KIF28PB7ZC32 967 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 DDX39AO00148 427 aaKnown RBP11.41□□□□□ -0.58
TTC39A-207ENST00000411642 MSH4O15457 936 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 SLC37A4O43826 429 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 HSP90AA1P07900 732 aaKnown RBP11.41□□□□□ -0.58
TTC39A-207ENST00000411642 ZNF286BP0CG31 522 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 HOXD8P13378 290 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-207ENST00000411642 GCFC2P16383 781 aaKnown RBP11.41□□□□□ -0.58
TTC39A-207ENST00000411642 CYP3A7P24462 503 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 PSMC6P62333 389 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 Q4G0T1 1027 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 MCTP1Q6DN14 999 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 PPP4R3AQ6IN85 833 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 NOSTRINQ8IVI9 506 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 DPF3Q92784 378 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 MBOAT7Q96N66 472 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 NAP1L4Q99733 375 aaKnown RBP11.41□□□□□ -0.58
TTC39A-207ENST00000411642 MTG1Q9BT17 334 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-207ENST00000411642 SLC9A2Q9UBY0 812 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 TELO2Q9Y4R8 837 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 EVPLQ92817 2033 aa11.41□□□□□ -0.58
TTC39A-207ENST00000411642 LTBP2Q14767 1821 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 VPS37CA5D8V6 355 aaPredicted RBP11.4□□□□□ -0.58
TTC39A-207ENST00000411642 DHX15O43143 795 aaKnown RBP11.4□□□□□ -0.58
TTC39A-207ENST00000411642 PPFIA4O75335 1185 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 LGALS2P05162 132 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 ATP2B1P20020 1258 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 PDCP20941 246 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 U2AF2P26368 475 aaKnown RBP eCLIP11.4□□□□□ -0.58
TTC39A-207ENST00000411642 TCF7P36402 384 aaPredicted RBP11.4□□□□□ -0.58
TTC39A-207ENST00000411642 RTP1P59025 263 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 CHMP4BP1P59074 171 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 ITGA7Q13683 1181 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 SNX17Q15036 470 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 TRIM60Q495X7 471 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 KAT2BQ92831 832 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 TBC1D22BQ9NU19 505 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 TCEAL9Q9UHQ7 104 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 ATP11BQ9Y2G3 1177 aa11.4□□□□□ -0.58
TTC39A-207ENST00000411642 GSTTP1A0A1W2PQM5 241 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 ARVCFO00192 962 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 WNT7AO00755 349 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 EVI5O60447 810 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 PQBP1O60828 265 aaKnown RBP11.39□□□□□ -0.59
TTC39A-207ENST00000411642 GAS7O60861 476 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 CCNE2O96020 404 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 F2P00734 622 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 ACTR2P61160 394 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 NBPF20Q3BBV1 942 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 UTP14CQ5TAP6 766 aaKnown RBP11.39□□□□□ -0.59
TTC39A-207ENST00000411642 C1orf53Q5VUE5 145 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 LRCH2Q5VUJ6 765 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 TRIM50Q86XT4 487 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 POTEDQ86YR6 584 aa11.39□□□□□ -0.59
TTC39A-207ENST00000411642 C7orf61Q8IZ16 206 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms