RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 UBA1P22314 1058 aaKnown RBP17.2■□□□□ 0.34
LSM5-207ENST00000410044 CCND3P30281 292 aaPredicted RBP17.2■□□□□ 0.34
LSM5-207ENST00000410044 ITGB3BPQ13352 177 aaPredicted RBP17.2■□□□□ 0.34
LSM5-207ENST00000410044 PDIA5Q14554 519 aa17.2■□□□□ 0.34
LSM5-207ENST00000410044 TMEM63BQ5T3F8 832 aa17.2■□□□□ 0.34
LSM5-207ENST00000410044 SH3TC2Q8TF17 1288 aa17.2■□□□□ 0.34
LSM5-207ENST00000410044 SCAND2PQ9GZW5 306 aaPredicted RBP17.2■□□□□ 0.34
LSM5-207ENST00000410044 PCDHA12Q9UN75 941 aa17.2■□□□□ 0.34
LSM5-207ENST00000410044 DOCK5Q9H7D0 1870 aa17.19■□□□□ 0.34
LSM5-207ENST00000410044 ADCY6O43306 1168 aa17.19■□□□□ 0.34
LSM5-207ENST00000410044 MSCO60682 206 aa17.19■□□□□ 0.34
LSM5-207ENST00000410044 FARP2O94887 1054 aaPredicted RBP17.19■□□□□ 0.34
LSM5-207ENST00000410044 GH1P01241 217 aa17.19■□□□□ 0.34
LSM5-207ENST00000410044 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
LSM5-207ENST00000410044 SPIRE1Q08AE8 756 aa17.19■□□□□ 0.34
LSM5-207ENST00000410044 PPP2R5CQ13362 524 aa17.19■□□□□ 0.34
LSM5-207ENST00000410044 LAMC2Q13753 1193 aa17.19■□□□□ 0.34
LSM5-207ENST00000410044 FOXD4L6Q3SYB3 417 aaPredicted RBP17.19■□□□□ 0.34
LSM5-207ENST00000410044 LRCH2Q5VUJ6 765 aa17.19■□□□□ 0.34
LSM5-207ENST00000410044 METTL7BQ6UX53 244 aa17.19■□□□□ 0.34
LSM5-207ENST00000410044 FOXD4L3Q6VB84 417 aaPredicted RBP17.19■□□□□ 0.34
LSM5-207ENST00000410044 SDF4Q9BRK5 362 aa17.19■□□□□ 0.34
LSM5-207ENST00000410044 BCAS3Q9H6U6 928 aa17.19■□□□□ 0.34
LSM5-207ENST00000410044 TTC12Q9H892 705 aaPredicted RBP17.19■□□□□ 0.34
LSM5-207ENST00000410044 POTEFA5A3E0 1075 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 SPTLC2O15270 562 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 MARCH6O60337 910 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 GAS7O60861 476 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 ATG7O95352 703 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 GGPS1O95749 300 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 TXKP42681 527 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 CEBPZQ03701 1054 aaKnown RBP17.18■□□□□ 0.34
LSM5-207ENST00000410044 ARHGAP1Q07960 439 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 STK38Q15208 465 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 IL17AQ16552 155 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 ZNF746Q6NUN9 644 aaPredicted RBP17.18■□□□□ 0.34
LSM5-207ENST00000410044 DTHD1Q6ZMT9 781 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 DHX37Q8IY37 1157 aaKnown RBP17.18■□□□□ 0.34
LSM5-207ENST00000410044 COPS5Q92905 334 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 FERMT2Q96AC1 680 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 ZNF333Q96JL9 665 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 CHAMP1Q96JM3 812 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 TEKT3Q9BXF9 490 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 PAK6Q9NQU5 681 aaPredicted RBP17.18■□□□□ 0.34
LSM5-207ENST00000410044 SLC9A2Q9UBY0 812 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 DDX20Q9UHI6 824 aaKnown RBP17.18■□□□□ 0.34
LSM5-207ENST00000410044 VAV3Q9UKW4 847 aa17.18■□□□□ 0.34
LSM5-207ENST00000410044 SRPRBQ9Y5M8 271 aaKnown RBP17.18■□□□□ 0.34
LSM5-207ENST00000410044 CNGA1P29973 690 aa17.17■□□□□ 0.34
LSM5-207ENST00000410044 GJA9P57773 515 aa17.17■□□□□ 0.34
LSM5-207ENST00000410044 KRT76Q01546 638 aa17.17■□□□□ 0.34
LSM5-207ENST00000410044 LHX8Q68G74 356 aa17.17■□□□□ 0.34
LSM5-207ENST00000410044 CYFIP1Q7L576 1253 aa17.17■□□□□ 0.34
LSM5-207ENST00000410044 IGSF22Q8N9C0 903 aa17.17■□□□□ 0.34
LSM5-207ENST00000410044 RDM1Q8NG50 284 aa17.17■□□□□ 0.34
LSM5-207ENST00000410044 KCNG4Q8TDN1 519 aa17.17■□□□□ 0.34
LSM5-207ENST00000410044 LEO1Q8WVC0 666 aaPredicted RBP17.17■□□□□ 0.34
LSM5-207ENST00000410044 GJA10Q969M2 543 aa17.17■□□□□ 0.34
LSM5-207ENST00000410044 UPF3AQ9H1J1 476 aaKnown RBP17.17■□□□□ 0.34
LSM5-207ENST00000410044 MLXIPQ9HAP2 919 aa17.17■□□□□ 0.34
LSM5-207ENST00000410044 JPH1Q9HDC5 661 aaPredicted RBP17.17■□□□□ 0.34
LSM5-207ENST00000410044 FBXO2Q9UK22 296 aaPredicted RBP17.17■□□□□ 0.34
LSM5-207ENST00000410044 DYNC1LI2O43237 492 aaPredicted RBP17.16■□□□□ 0.34
LSM5-207ENST00000410044 RARBP10826 455 aa17.16■□□□□ 0.34
LSM5-207ENST00000410044 HOXD8P13378 290 aaPredicted RBP17.16■□□□□ 0.34
LSM5-207ENST00000410044 SMAP1Q8IYB5 467 aaPredicted RBP17.16■□□□□ 0.34
LSM5-207ENST00000410044 SPATA32Q96LK8 384 aa17.16■□□□□ 0.34
LSM5-207ENST00000410044 MCOLN1Q9GZU1 580 aa17.16■□□□□ 0.34
LSM5-207ENST00000410044 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.16■□□□□ 0.34
LSM5-207ENST00000410044 UNC93B1Q9H1C4 597 aa17.16■□□□□ 0.34
LSM5-207ENST00000410044 PKD2L1Q9P0L9 805 aa17.16■□□□□ 0.34
LSM5-207ENST00000410044 WDR81Q562E7 1941 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 GSTTP1A0A1W2PQM5 241 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 A6NJR5 290 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 CTAGE5O15320 804 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 PPFIA4O75335 1185 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 CCNE2O96020 404 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 CCL5P13501 91 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 CAPN2P17655 700 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
LSM5-207ENST00000410044 SFNP31947 248 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 LONP1P36776 959 aaKnown RBP17.15■□□□□ 0.34
LSM5-207ENST00000410044 TECP42680 631 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 MTFR1Q15390 333 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 TMEM266Q2M3C6 531 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 GJC2Q5T442 439 aaPredicted RBP17.15■□□□□ 0.34
LSM5-207ENST00000410044 ABHD15Q6UXT9 468 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 TLK2Q86UE8 772 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 KRI1Q8N9T8 703 aaKnown RBP17.15■□□□□ 0.34
LSM5-207ENST00000410044 ZNF579Q8NAF0 562 aaKnown RBP17.15■□□□□ 0.34
LSM5-207ENST00000410044 OR6J1Q8NGC5 347 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 PPTC7Q8NI37 304 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 SEPT1Q8WYJ6 367 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 AK8Q96MA6 479 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 UIMC1Q96RL1 719 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 GPR20Q99678 358 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 RAB34Q9BZG1 259 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 UNC45AQ9H3U1 944 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 STK24Q9Y6E0 443 aa17.15■□□□□ 0.34
LSM5-207ENST00000410044 ELP1O95163 1332 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms