RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 KCNMB3Q9NPA1 279 aa26.35■■□□□ 1.81
PMS1-205ENST00000409985 MYH7BA7E2Y1 1941 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 USP17L10C9JJH3 530 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 SCNN1DP51172 638 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 UBE2SQ16763 222 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 KCNK18Q7Z418 384 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 CCDC65Q8IXS2 484 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 GJA3Q9Y6H8 435 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 PITPNM2Q9BZ72 1349 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 TBX3O15119 743 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 DDNO94850 711 aaPredicted RBP26.34■■□□□ 1.81
PMS1-205ENST00000409985 IDEP14735 1019 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 OAS2P29728 719 aaKnown RBP26.34■■□□□ 1.81
PMS1-205ENST00000409985 USP14P54578 494 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 ITIH3Q06033 890 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 COASYQ13057 564 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 IQCEQ6IPM2 695 aa26.34■■□□□ 1.81
PMS1-205ENST00000409985 SSU72P8A0A1W2PR75 194 aa26.33■■□□□ 1.81
PMS1-205ENST00000409985 CCDC66A2RUB6 948 aa26.33■■□□□ 1.81
PMS1-205ENST00000409985 MARCH6O60337 910 aa26.33■■□□□ 1.81
PMS1-205ENST00000409985 CRKP46108 304 aa26.33■■□□□ 1.81
PMS1-205ENST00000409985 FAM26FQ5R3K3 315 aa26.33■■□□□ 1.81
PMS1-205ENST00000409985 KCTD17Q8N5Z5 321 aa26.33■■□□□ 1.81
PMS1-205ENST00000409985 SECISBP2LQ93073 1101 aaKnown RBP26.33■■□□□ 1.81
PMS1-205ENST00000409985 LACRTQ9GZZ8 138 aa26.33■■□□□ 1.81
PMS1-205ENST00000409985 PI4KBQ9UBF8 816 aa26.33■■□□□ 1.81
PMS1-205ENST00000409985 ZHX1Q9UKY1 873 aaPredicted RBP26.33■■□□□ 1.81
PMS1-205ENST00000409985 JRKLQ9Y4A0 524 aa26.33■■□□□ 1.81
PMS1-205ENST00000409985 COL4A3BPQ9Y5P4 624 aa26.33■■□□□ 1.81
PMS1-205ENST00000409985 ATP1A1P05023 1023 aaKnown RBP26.32■■□□□ 1.8
PMS1-205ENST00000409985 MAPK8IP2Q13387 824 aaPredicted RBP26.32■■□□□ 1.8
PMS1-205ENST00000409985 ZC3H3Q8IXZ2 948 aaKnown RBP26.32■■□□□ 1.8
PMS1-205ENST00000409985 RUBCNQ92622 972 aa26.32■■□□□ 1.8
PMS1-205ENST00000409985 PANK4Q9NVE7 773 aa26.32■■□□□ 1.8
PMS1-205ENST00000409985 PJA2O43164 708 aa26.32■■□□□ 1.8
PMS1-205ENST00000409985 GMPSP49915 693 aaPredicted RBP26.32■■□□□ 1.8
PMS1-205ENST00000409985 TNIP1Q15025 636 aa26.32■■□□□ 1.8
PMS1-205ENST00000409985 PPP4R3CPQ6ZMV5 832 aa26.32■■□□□ 1.8
PMS1-205ENST00000409985 ZNF572Q7Z3I7 529 aaPredicted RBP26.32■■□□□ 1.8
PMS1-205ENST00000409985 CLEC10AQ8IUN9 316 aa26.32■■□□□ 1.8
PMS1-205ENST00000409985 ABCB6Q9NP58 842 aa26.32■■□□□ 1.8
PMS1-205ENST00000409985 PSD3Q9NYI0 1048 aa26.32■■□□□ 1.8
PMS1-205ENST00000409985 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.32■■□□□ 1.8
PMS1-205ENST00000409985 ARHGAP20Q9P2F6 1191 aa26.32■■□□□ 1.8
PMS1-205ENST00000409985 SYNPO2Q9UMS6 1093 aa26.32■■□□□ 1.8
PMS1-205ENST00000409985 RCCD1A6NED2 376 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 MPHOSPH10O00566 681 aaKnown RBP26.31■■□□□ 1.8
PMS1-205ENST00000409985 TACC1O75410 805 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 VSNL1P62760 191 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 ECM1Q16610 540 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 QRICH1Q2TAL8 776 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 NCAPH2Q6IBW4 605 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 TATDN1Q6P1N9 297 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 NOA1Q8NC60 698 aaKnown RBP26.31■■□□□ 1.8
PMS1-205ENST00000409985 AGBL3Q8NEM8 1001 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 CRYGNQ8WXF5 182 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 BAP1Q92560 729 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 ACBD3Q9H3P7 528 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 VIPAS39Q9H9C1 493 aa26.31■■□□□ 1.8
PMS1-205ENST00000409985 SIPA1L1O43166 1804 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 FRMD3A2A2Y4 597 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 EGFRP00533 1210 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 MAP9Q49MG5 647 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 KCTD1Q719H9 257 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 GPC2Q8N158 579 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 NEK11Q8NG66 645 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 EEF2KMTQ96G04 330 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 FAM184BQ9ULE4 1060 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 PCDHA2Q9Y5H9 948 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 PCDHA13Q9Y5I0 950 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 FOSP01100 380 aaPredicted RBP26.3■■□□□ 1.8
PMS1-205ENST00000409985 RHOXF2BP0C7M4 288 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 SLC16A2P36021 539 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 KIF11P52732 1056 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 GMCL1P1Q8NEA9 526 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 RHOXF2Q9BQY4 288 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 ANO3Q9BYT9 981 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 IFIH1Q9BYX4 1025 aaKnown RBP26.3■■□□□ 1.8
PMS1-205ENST00000409985 SH2D4AQ9H788 454 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 MMRN2Q9H8L6 949 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 PCDHA1Q9Y5I3 950 aa26.3■■□□□ 1.8
PMS1-205ENST00000409985 ZNF263O14978 683 aa26.29■■□□□ 1.8
PMS1-205ENST00000409985 SLC1A4P43007 532 aa26.29■■□□□ 1.8
PMS1-205ENST00000409985 MMP14P50281 582 aa26.29■■□□□ 1.8
PMS1-205ENST00000409985 EDRF1Q3B7T1 1238 aa26.29■■□□□ 1.8
PMS1-205ENST00000409985 CERKLQ49MI3 558 aaPredicted RBP26.29■■□□□ 1.8
PMS1-205ENST00000409985 HAUS3Q68CZ6 603 aa26.29■■□□□ 1.8
PMS1-205ENST00000409985 PDXDC1Q6P996 788 aa26.29■■□□□ 1.8
PMS1-205ENST00000409985 DNAJC18Q9H819 358 aa26.29■■□□□ 1.8
PMS1-205ENST00000409985 CEP72Q9P209 647 aa26.29■■□□□ 1.8
PMS1-205ENST00000409985 ATAD5Q96QE3 1844 aa26.29■■□□□ 1.8
PMS1-205ENST00000409985 RBAK-RBAKDNI3L0D1 243 aa26.28■■□□□ 1.8
PMS1-205ENST00000409985 PLA2G4BP0C869 781 aa26.28■■□□□ 1.8
PMS1-205ENST00000409985 NFIAQ12857 509 aa26.28■■□□□ 1.8
PMS1-205ENST00000409985 ASTE1Q2TB18 679 aaPredicted RBP26.28■■□□□ 1.8
PMS1-205ENST00000409985 Q4G0T1 1027 aa26.28■■□□□ 1.8
PMS1-205ENST00000409985 SLFN13Q68D06 897 aa26.28■■□□□ 1.8
PMS1-205ENST00000409985 TMEM179Q6ZVK1 233 aa26.28■■□□□ 1.8
PMS1-205ENST00000409985 GMCL1Q96IK5 515 aa26.28■■□□□ 1.8
PMS1-205ENST00000409985 EEF2P13639 858 aaKnown RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms