RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 FOXD4L3Q6VB84 417 aaPredicted RBP23.32■■□□□ 1.32
C4orf48-202ENST00000409860 UIMC1Q96RL1 719 aa23.32■■□□□ 1.32
C4orf48-202ENST00000409860 RIT2Q99578 217 aa23.32■■□□□ 1.32
C4orf48-202ENST00000409860 SPC25Q9HBM1 224 aa23.32■■□□□ 1.32
C4orf48-202ENST00000409860 LAD1O00515 517 aa23.31■■□□□ 1.32
C4orf48-202ENST00000409860 DYNC1LI2O43237 492 aaPredicted RBP23.31■■□□□ 1.32
C4orf48-202ENST00000409860 GAS7O60861 476 aa23.31■■□□□ 1.32
C4orf48-202ENST00000409860 ARHGAP1Q07960 439 aa23.31■■□□□ 1.32
C4orf48-202ENST00000409860 PTGDRQ13258 359 aa23.31■■□□□ 1.32
C4orf48-202ENST00000409860 SF3A1Q15459 793 aaKnown RBP23.31■■□□□ 1.32
C4orf48-202ENST00000409860 CYFIP1Q7L576 1253 aa23.31■■□□□ 1.32
C4orf48-202ENST00000409860 EMID1Q96A84 441 aaPredicted RBP23.31■■□□□ 1.32
C4orf48-202ENST00000409860 USP28Q96RU2 1077 aa23.31■■□□□ 1.32
C4orf48-202ENST00000409860 TEKT3Q9BXF9 490 aa23.31■■□□□ 1.32
C4orf48-202ENST00000409860 TMEM60Q9H2L4 133 aa23.31■■□□□ 1.32
C4orf48-202ENST00000409860 JPH1Q9HDC5 661 aaPredicted RBP23.31■■□□□ 1.32
C4orf48-202ENST00000409860 XPNPEP3Q9NQH7 507 aa23.31■■□□□ 1.32
C4orf48-202ENST00000409860 KIAA1217Q5T5P2 1943 aa23.3■■□□□ 1.32
C4orf48-202ENST00000409860 SORBS3O60504 671 aa23.3■■□□□ 1.32
C4orf48-202ENST00000409860 FARP2O94887 1054 aaPredicted RBP23.3■■□□□ 1.32
C4orf48-202ENST00000409860 COL13A1Q5TAT6 717 aaPredicted RBP23.3■■□□□ 1.32
C4orf48-202ENST00000409860 HAS1Q92839 578 aa23.3■■□□□ 1.32
C4orf48-202ENST00000409860 SPATA33Q96N06 139 aa23.3■■□□□ 1.32
C4orf48-202ENST00000409860 DEFB118Q96PH6 123 aa23.3■■□□□ 1.32
C4orf48-202ENST00000409860 MTMR9Q96QG7 549 aa23.3■■□□□ 1.32
C4orf48-202ENST00000409860 POLR3EQ9NVU0 708 aa23.3■■□□□ 1.32
C4orf48-202ENST00000409860 SLC9A2Q9UBY0 812 aa23.3■■□□□ 1.32
C4orf48-202ENST00000409860 CLIC4Q9Y696 253 aa23.3■■□□□ 1.32
C4orf48-202ENST00000409860 DDX39AO00148 427 aaKnown RBP23.29■■□□□ 1.32
C4orf48-202ENST00000409860 NOP56O00567 594 aaKnown RBP23.29■■□□□ 1.32
C4orf48-202ENST00000409860 DHX15O43143 795 aaKnown RBP23.29■■□□□ 1.32
C4orf48-202ENST00000409860 PTGS1P23219 599 aa23.29■■□□□ 1.32
C4orf48-202ENST00000409860 GJA9P57773 515 aa23.29■■□□□ 1.32
C4orf48-202ENST00000409860 ATP2C1P98194 919 aaPredicted RBP23.29■■□□□ 1.32
C4orf48-202ENST00000409860 KRT76Q01546 638 aa23.29■■□□□ 1.32
C4orf48-202ENST00000409860 CEBPZQ03701 1054 aaKnown RBP23.29■■□□□ 1.32
C4orf48-202ENST00000409860 BRDTQ58F21 947 aaPredicted RBP23.29■■□□□ 1.32
C4orf48-202ENST00000409860 LHX8Q68G74 356 aa23.29■■□□□ 1.32
C4orf48-202ENST00000409860 C4orf32Q8N8J7 132 aa23.29■■□□□ 1.32
C4orf48-202ENST00000409860 GJA10Q969M2 543 aa23.29■■□□□ 1.32
C4orf48-202ENST00000409860 TMEM106CQ9BVX2 250 aa23.29■■□□□ 1.32
C4orf48-202ENST00000409860 FTOQ9C0B1 505 aaKnown RBP eCLIP23.29■■□□□ 1.32
C4orf48-202ENST00000409860 UPF3AQ9H1J1 476 aaKnown RBP23.29■■□□□ 1.32
C4orf48-202ENST00000409860 CFAP45Q9UL16 551 aa23.29■■□□□ 1.32
C4orf48-202ENST00000409860 HTTP42858 3142 aa23.29■■□□□ 1.32
C4orf48-202ENST00000409860 SYNRGQ9UMZ2 1314 aa23.29■■□□□ 1.32
C4orf48-202ENST00000409860 PSMD10O75832 226 aa23.28■■□□□ 1.32
C4orf48-202ENST00000409860 GJB1P08034 283 aa23.28■■□□□ 1.32
C4orf48-202ENST00000409860 TXKP42681 527 aa23.28■■□□□ 1.32
C4orf48-202ENST00000409860 NASPP49321 788 aaPredicted RBP23.28■■□□□ 1.32
C4orf48-202ENST00000409860 SP4Q02446 784 aa23.28■■□□□ 1.32
C4orf48-202ENST00000409860 DNM1Q05193 864 aaKnown RBP23.28■■□□□ 1.32
C4orf48-202ENST00000409860 PPTC7Q8NI37 304 aa23.28■■□□□ 1.32
C4orf48-202ENST00000409860 PGK1P00558 417 aa23.27■■□□□ 1.32
C4orf48-202ENST00000409860 C6orf222P0C671 652 aaPredicted RBP23.27■■□□□ 1.32
C4orf48-202ENST00000409860 NCLP19338 710 aaKnown RBP23.27■■□□□ 1.32
C4orf48-202ENST00000409860 PRPHP41219 470 aa23.27■■□□□ 1.32
C4orf48-202ENST00000409860 CPT1AP50416 773 aa23.27■■□□□ 1.32
C4orf48-202ENST00000409860 KRT85P78386 507 aa23.27■■□□□ 1.32
C4orf48-202ENST00000409860 STK38Q15208 465 aa23.27■■□□□ 1.32
C4orf48-202ENST00000409860 TMEM266Q2M3C6 531 aa23.27■■□□□ 1.32
C4orf48-202ENST00000409860 ZNF746Q6NUN9 644 aaPredicted RBP23.27■■□□□ 1.32
C4orf48-202ENST00000409860 AFG1LQ8WV93 481 aa23.27■■□□□ 1.32
C4orf48-202ENST00000409860 BCAS3Q9H6U6 928 aa23.27■■□□□ 1.32
C4orf48-202ENST00000409860 TTC12Q9H892 705 aaPredicted RBP23.27■■□□□ 1.32
C4orf48-202ENST00000409860 TFIP11Q9UBB9 837 aaKnown RBP23.27■■□□□ 1.32
C4orf48-202ENST00000409860 PCDHA12Q9UN75 941 aa23.27■■□□□ 1.32
C4orf48-202ENST00000409860 ADAMTS4O75173 837 aa23.26■■□□□ 1.31
C4orf48-202ENST00000409860 YEATS4O95619 227 aa23.26■■□□□ 1.31
C4orf48-202ENST00000409860 NKX3-2P78367 333 aa23.26■■□□□ 1.31
C4orf48-202ENST00000409860 PTPAQ15257 358 aa23.26■■□□□ 1.31
C4orf48-202ENST00000409860 FSCN1Q16658 493 aaKnown RBP23.26■■□□□ 1.31
C4orf48-202ENST00000409860 ARL6IP4Q66PJ3 421 aaKnown RBP23.26■■□□□ 1.31
C4orf48-202ENST00000409860 RNF180Q86T96 592 aa23.26■■□□□ 1.31
C4orf48-202ENST00000409860 ELP1O95163 1332 aa23.26■■□□□ 1.31
C4orf48-202ENST00000409860 CHMP2AO43633 222 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 ZEB2O60315 1214 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 MYCNP04198 464 aaPredicted RBP23.25■■□□□ 1.31
C4orf48-202ENST00000409860 ACTR2P61160 394 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 PPP2R5CQ13362 524 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 SLC39A14Q15043 492 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 HSDL1Q3SXM5 330 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 DTHD1Q6ZMT9 781 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 SMAP1Q8IYB5 467 aaPredicted RBP23.25■■□□□ 1.31
C4orf48-202ENST00000409860 ARRDC4Q8NCT1 418 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 U2AF1L4Q8WU68 220 aaKnown RBP23.25■■□□□ 1.31
C4orf48-202ENST00000409860 SEPT1Q8WYJ6 367 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 GPR20Q99678 358 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 RAB34Q9BZG1 259 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 UNC45AQ9H3U1 944 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 VAV3Q9UKW4 847 aa23.25■■□□□ 1.31
C4orf48-202ENST00000409860 A6NJR5 290 aa23.24■■□□□ 1.31
C4orf48-202ENST00000409860 WDR64B1ANS9 1081 aa23.24■■□□□ 1.31
C4orf48-202ENST00000409860 SGPL1O95470 568 aa23.24■■□□□ 1.31
C4orf48-202ENST00000409860 CCNE2O96020 404 aa23.24■■□□□ 1.31
C4orf48-202ENST00000409860 MMP3P08254 477 aa23.24■■□□□ 1.31
C4orf48-202ENST00000409860 CST5P28325 142 aaPredicted RBP23.24■■□□□ 1.31
C4orf48-202ENST00000409860 SFNP31947 248 aa23.24■■□□□ 1.31
C4orf48-202ENST00000409860 JAK3P52333 1124 aa23.24■■□□□ 1.31
C4orf48-202ENST00000409860 GNASQ5JWF2 1037 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms