RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 TFCP2L1Q9NZI6 479 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 WHRNQ9P202 907 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 SFMBT1Q9UHJ3 866 aa7.84□□□□□ -1.15
LSM5-203ENST00000409782 UBR3Q6ZT12 1888 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 FAM86C2PA6NEL3 165 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 ALDH1L1O75891 902 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 CST3P01034 146 aaPredicted RBP7.83□□□□□ -1.16
LSM5-203ENST00000409782 HMOX1P09601 288 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 PPP2R1AP30153 589 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 AXDND1Q5T1B0 1012 aaPredicted RBP7.83□□□□□ -1.16
LSM5-203ENST00000409782 DDX46Q7L014 1031 aaKnown RBP7.83□□□□□ -1.16
LSM5-203ENST00000409782 FLAD1Q8NFF5 587 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 MFSD14AQ96MC6 490 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 PSMD1Q99460 953 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 TRIM39Q9HCM9 518 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 ATG3Q9NT62 314 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 LRP2BPQ9P2M1 347 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 ASAP1Q9ULH1 1129 aa7.83□□□□□ -1.16
LSM5-203ENST00000409782 COL5A3P25940 1745 aaPredicted RBP7.83□□□□□ -1.16
LSM5-203ENST00000409782 A0A087WZG4 1122 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 C9IYK1 514 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 TPD52L2O43399 206 aaKnown RBP7.82□□□□□ -1.16
LSM5-203ENST00000409782 DNAJC8O75937 253 aaPredicted RBP7.82□□□□□ -1.16
LSM5-203ENST00000409782 MAP4K4O95819 1239 aaPredicted RBP7.82□□□□□ -1.16
LSM5-203ENST00000409782 GABREP78334 506 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 CNGB1Q14028 1251 aaPredicted RBP7.82□□□□□ -1.16
LSM5-203ENST00000409782 TTF1Q15361 905 aaPredicted RBP7.82□□□□□ -1.16
LSM5-203ENST00000409782 ZMYM1Q5SVZ6 1142 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 YOD1Q5VVQ6 348 aaPredicted RBP7.82□□□□□ -1.16
LSM5-203ENST00000409782 POMZP3Q6PJE2 187 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 NSMFQ6X4W1 530 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 FBXL6Q8N531 539 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 BVESQ8NE79 360 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 MRGPRX3Q96LB0 322 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 TBC1D32Q96NH3 1257 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 MYH16Q9H6N6 1097 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 APEX2Q9UBZ4 518 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 PCOLCE2Q9UKZ9 415 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 NUDCQ9Y266 331 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 CSADQ9Y600 493 aa7.82□□□□□ -1.16
LSM5-203ENST00000409782 CNTNAP4Q9C0A0 1308 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 BRINP1O60477 761 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 PPM1BO75688 479 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 C6orf222P0C671 652 aaPredicted RBP7.81□□□□□ -1.16
LSM5-203ENST00000409782 SDSP20132 328 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 POLD1P28340 1107 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 GBP1P32455 592 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 RNF4P78317 190 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 ITPK1Q13572 414 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 SLBPQ14493 270 aaKnown RBP eCLIP7.81□□□□□ -1.16
LSM5-203ENST00000409782 RNF219Q5W0B1 726 aaPredicted RBP7.81□□□□□ -1.16
LSM5-203ENST00000409782 CDC37L1Q7L3B6 337 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 COL23A1Q86Y22 540 aaPredicted RBP7.81□□□□□ -1.16
LSM5-203ENST00000409782 CCDC146Q8IYE0 955 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 LINC00116Q8NCU8 138 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 LRRN4CLQ8ND94 238 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 ATL2Q8NHH9 583 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 SLC52A2Q9HAB3 445 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 FBRSQ9HAH7 460 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 LGR6Q9HBX8 967 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 PRR13Q9NZ81 148 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 TJP1Q07157 1748 aa7.81□□□□□ -1.16
LSM5-203ENST00000409782 KCPQ6ZWJ8 1503 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 LOC102724159A0A0B4J2E5 919 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 WDR64B1ANS9 1081 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 RNMTO43148 476 aaKnown RBP7.8□□□□□ -1.16
LSM5-203ENST00000409782 PRODHO43272 600 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 TSPAN6O43657 245 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 ASLP04424 464 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 GUCY2FP51841 1108 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 HLTFQ14527 1009 aaKnown RBP eCLIP7.8□□□□□ -1.16
LSM5-203ENST00000409782 PWP2Q15269 919 aaKnown RBP7.8□□□□□ -1.16
LSM5-203ENST00000409782 MTHFSDQ2M296 383 aaKnown RBP7.8□□□□□ -1.16
LSM5-203ENST00000409782 TDRD10Q5VZ19 366 aaKnown RBP7.8□□□□□ -1.16
LSM5-203ENST00000409782 TRIM59Q8IWR1 403 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.8□□□□□ -1.16
LSM5-203ENST00000409782 CCDC144CPQ8IYA2 1237 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 SHKBP1Q8TBC3 707 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 CCDC140Q96MF4 163 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 ORAI3Q9BRQ5 295 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 RNF112Q9ULX5 631 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 EMC9Q9Y3B6 208 aa7.8□□□□□ -1.16
LSM5-203ENST00000409782 VIRMAQ69YN4 1812 aaKnown RBP7.8□□□□□ -1.16
LSM5-203ENST00000409782 UBR2Q8IWV8 1755 aa7.79□□□□□ -1.16
LSM5-203ENST00000409782 NOP56O00567 594 aaKnown RBP7.79□□□□□ -1.16
LSM5-203ENST00000409782 TP53P04637 393 aaPredicted RBP7.79□□□□□ -1.16
LSM5-203ENST00000409782 U2AF1L5P0DN76 240 aaPredicted RBP7.79□□□□□ -1.16
LSM5-203ENST00000409782 PRKAR2BP31323 418 aa7.79□□□□□ -1.16
LSM5-203ENST00000409782 ZEB1P37275 1124 aaPredicted RBP7.79□□□□□ -1.16
LSM5-203ENST00000409782 U2AF1Q01081 240 aaKnown RBP eCLIP7.79□□□□□ -1.16
LSM5-203ENST00000409782 CYP27A1Q02318 531 aa7.79□□□□□ -1.16
LSM5-203ENST00000409782 MCL1Q07820 350 aa7.79□□□□□ -1.16
LSM5-203ENST00000409782 MAP4K2Q12851 820 aa7.79□□□□□ -1.16
LSM5-203ENST00000409782 GORABQ5T7V8 394 aa7.79□□□□□ -1.16
LSM5-203ENST00000409782 ZAR1Q86SH2 424 aa7.79□□□□□ -1.16
LSM5-203ENST00000409782 C7orf61Q8IZ16 206 aa7.79□□□□□ -1.16
LSM5-203ENST00000409782 ARHGEF39Q8N4T4 335 aa7.79□□□□□ -1.16
LSM5-203ENST00000409782 UBR7Q8N806 425 aa7.79□□□□□ -1.16
LSM5-203ENST00000409782 ISL2Q96A47 359 aa7.79□□□□□ -1.16
LSM5-203ENST00000409782 METTL22Q9BUU2 404 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms