RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 MICU3Q86XE3 530 aa16.96■□□□□ 0.3
CBX3-203ENST00000409747 FANCBQ8NB91 859 aa16.96■□□□□ 0.3
CBX3-203ENST00000409747 PPM1EQ8WY54 764 aa16.96■□□□□ 0.3
CBX3-203ENST00000409747 TET1Q8NFU7 2136 aa16.95■□□□□ 0.3
CBX3-203ENST00000409747 TLL1O43897 1013 aa16.95■□□□□ 0.3
CBX3-203ENST00000409747 NBNO60934 754 aa16.95■□□□□ 0.3
CBX3-203ENST00000409747 ZNF618Q5T7W0 954 aa16.95■□□□□ 0.3
CBX3-203ENST00000409747 ATXN2LQ8WWM7 1075 aaKnown RBP16.95■□□□□ 0.3
CBX3-203ENST00000409747 ATP6V0A1Q93050 837 aa16.95■□□□□ 0.3
CBX3-203ENST00000409747 NEK1Q96PY6 1258 aa16.95■□□□□ 0.3
CBX3-203ENST00000409747 GPR20Q99678 358 aa16.95■□□□□ 0.3
CBX3-203ENST00000409747 LRRC2Q9BYS8 371 aa16.95■□□□□ 0.3
CBX3-203ENST00000409747 TSPYL2Q9H2G4 693 aaPredicted RBP16.95■□□□□ 0.3
CBX3-203ENST00000409747 EHMT1Q9H9B1 1298 aa16.95■□□□□ 0.3
CBX3-203ENST00000409747 RBM28Q9NW13 759 aaKnown RBP16.95■□□□□ 0.3
CBX3-203ENST00000409747 THEGQ9P2T0 379 aa16.95■□□□□ 0.3
CBX3-203ENST00000409747 SPTBN5Q9NRC6 3674 aaKnown RBP16.94■□□□□ 0.3
CBX3-203ENST00000409747 SPDYE3A6NKU9 549 aa16.94■□□□□ 0.3
CBX3-203ENST00000409747 CAND2O75155 1236 aa16.94■□□□□ 0.3
CBX3-203ENST00000409747 SMIM10L2AP0DMW4 78 aa16.94■□□□□ 0.3
CBX3-203ENST00000409747 SMIM10L2BP0DMW5 78 aa16.94■□□□□ 0.3
CBX3-203ENST00000409747 HOXC8P31273 242 aa16.94■□□□□ 0.3
CBX3-203ENST00000409747 SEMA3FQ13275 785 aa16.94■□□□□ 0.3
CBX3-203ENST00000409747 IKBKEQ14164 716 aa16.94■□□□□ 0.3
CBX3-203ENST00000409747 GPNMBQ14956 572 aa16.94■□□□□ 0.3
CBX3-203ENST00000409747 TEX2Q8IWB9 1127 aa16.94■□□□□ 0.3
CBX3-203ENST00000409747 CMTR1Q8N1G2 835 aaKnown RBP16.94■□□□□ 0.3
CBX3-203ENST00000409747 GPRASP2Q96D09 838 aa16.94■□□□□ 0.3
CBX3-203ENST00000409747 GTPBP6O43824 516 aaPredicted RBP16.93■□□□□ 0.3
CBX3-203ENST00000409747 CDC45O75419 566 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 THPOP40225 353 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 ZNF200P98182 395 aaPredicted RBP16.93■□□□□ 0.3
CBX3-203ENST00000409747 KRT32Q14532 448 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 ZBED2Q9BTP6 218 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 MYO9BQ13459 2157 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 RSPH10B2B2RC85 870 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 RSPH10BP0C881 870 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 TRAF7Q6Q0C0 670 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 APOA5Q6Q788 366 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 HEATR3Q7Z4Q2 680 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 RAB11FIP4Q86YS3 637 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 CCDC82Q8N4S0 544 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 WNT8BQ93098 351 aa16.93■□□□□ 0.3
CBX3-203ENST00000409747 PTPRSQ13332 1948 aa16.92■□□□□ 0.3
CBX3-203ENST00000409747 DOCK5Q9H7D0 1870 aa16.92■□□□□ 0.3
CBX3-203ENST00000409747 LGR5O75473 907 aa16.92■□□□□ 0.3
CBX3-203ENST00000409747 HMGB1P09429 215 aaKnown RBP16.92■□□□□ 0.3
CBX3-203ENST00000409747 TAP1Q03518 808 aa16.92■□□□□ 0.3
CBX3-203ENST00000409747 COL9A3Q14050 684 aaPredicted RBP16.92■□□□□ 0.3
CBX3-203ENST00000409747 HIC1Q14526 733 aa16.92■□□□□ 0.3
CBX3-203ENST00000409747 CCDC85BQ15834 202 aaPredicted RBP16.92■□□□□ 0.3
CBX3-203ENST00000409747 TSGA10IPQ3SY00 556 aa16.92■□□□□ 0.3
CBX3-203ENST00000409747 PPP1R18Q6NYC8 613 aa16.92■□□□□ 0.3
CBX3-203ENST00000409747 DHX32Q7L7V1 743 aaKnown RBP16.92■□□□□ 0.3
CBX3-203ENST00000409747 BCAS3Q9H6U6 928 aa16.92■□□□□ 0.3
CBX3-203ENST00000409747 MAFGO15525 162 aa16.91■□□□□ 0.3
CBX3-203ENST00000409747 ZBTB43O43298 467 aa16.91■□□□□ 0.3
CBX3-203ENST00000409747 POU3F3P20264 500 aaPredicted RBP16.91■□□□□ 0.3
CBX3-203ENST00000409747 SP4Q02446 784 aa16.91■□□□□ 0.3
CBX3-203ENST00000409747 MTMR1Q13613 665 aa16.91■□□□□ 0.3
CBX3-203ENST00000409747 RNPEPQ9H4A4 650 aa16.91■□□□□ 0.3
CBX3-203ENST00000409747 CNTNAP5Q8WYK1 1306 aa16.91■□□□□ 0.3
CBX3-203ENST00000409747 hCG_1642624A0A1W2PR95 340 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 hCG_1984214I3L0E3 225 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 TREHO43280 583 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 GJB5O95377 273 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 DEFB103AP81534 67 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 EXOSC10Q01780 885 aaKnown RBP16.9■□□□□ 0.3
CBX3-203ENST00000409747 MBTPS1Q14703 1052 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 UBE2SQ16763 222 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 RTN1Q16799 776 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 UTP14CQ5TAP6 766 aaKnown RBP16.9■□□□□ 0.3
CBX3-203ENST00000409747 MICALL1Q8N3F8 863 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 ZNF713Q8N859 430 aaPredicted RBP16.9■□□□□ 0.3
CBX3-203ENST00000409747 ARNTL2Q8WYA1 636 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 RAD9AQ99638 391 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 PCDHA6Q9UN73 950 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 PCDHA8Q9Y5H6 950 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 NRCAMQ92823 1304 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 KCNA2P16389 499 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 TCF7P36402 384 aaPredicted RBP16.9■□□□□ 0.3
CBX3-203ENST00000409747 RCAN1P53805 252 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 NAPAP54920 295 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 MRPS5P82675 430 aaKnown RBP16.9■□□□□ 0.3
CBX3-203ENST00000409747 TRIM50Q86XT4 487 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 IL27Q8NEV9 243 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 GLT8D2Q9H1C3 349 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 CERS4Q9HA82 394 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 PRDM6Q9NQX0 595 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 UBIAD1Q9Y5Z9 338 aa16.9■□□□□ 0.3
CBX3-203ENST00000409747 REV3LO60673 3130 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 AMHP03971 560 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 ITGB5P18084 799 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 ARHGAP4P98171 946 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 PLEKHG4Q58EX7 1191 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 WWC2Q6AWC2 1192 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 SEPT1Q8WYJ6 367 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 ASB2Q96Q27 587 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 JADE2Q9NQC1 790 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms