RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 METTL7BQ6UX53 244 aa18.8■□□□□ 0.6
SUMO1-208ENST00000409627 DHX37Q8IY37 1157 aaKnown RBP18.8■□□□□ 0.6
SUMO1-208ENST00000409627 SLFN12Q8IYM2 578 aa18.8■□□□□ 0.6
SUMO1-208ENST00000409627 C4orf32Q8N8J7 132 aa18.8■□□□□ 0.6
SUMO1-208ENST00000409627 OR6J1Q8NGC5 347 aa18.8■□□□□ 0.6
SUMO1-208ENST00000409627 HAS1Q92839 578 aa18.8■□□□□ 0.6
SUMO1-208ENST00000409627 UPF3AQ9H1J1 476 aaKnown RBP18.8■□□□□ 0.6
SUMO1-208ENST00000409627 TMEM60Q9H2L4 133 aa18.8■□□□□ 0.6
SUMO1-208ENST00000409627 CEP131Q9UPN4 1083 aa18.8■□□□□ 0.6
SUMO1-208ENST00000409627 SYNRGQ9UMZ2 1314 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 DHX15O43143 795 aaKnown RBP18.79■□□□□ 0.6
SUMO1-208ENST00000409627 MYCP01106 439 aaPredicted RBP18.79■□□□□ 0.6
SUMO1-208ENST00000409627 OR52Z1P0C646 297 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 GJA9P57773 515 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 ATP2C1P98194 919 aaPredicted RBP18.79■□□□□ 0.6
SUMO1-208ENST00000409627 PTGDRQ13258 359 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 SF3A1Q15459 793 aaKnown RBP18.79■□□□□ 0.6
SUMO1-208ENST00000409627 LRCH2Q5VUJ6 765 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 ANO1Q5XXA6 986 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 CYFIP1Q7L576 1253 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 USP28Q96RU2 1077 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 TEKT3Q9BXF9 490 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 AP5M1Q9H0R1 490 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 MLXIPQ9HAP2 919 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 JPH1Q9HDC5 661 aaPredicted RBP18.79■□□□□ 0.6
SUMO1-208ENST00000409627 XPNPEP3Q9NQH7 507 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 POLR3EQ9NVU0 708 aa18.79■□□□□ 0.6
SUMO1-208ENST00000409627 TCHHQ07283 1943 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 MARCH6O60337 910 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 GAS7O60861 476 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 PSMD10O75832 226 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 GJB1P08034 283 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 PTGS1P23219 599 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 PRPHP41219 470 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 DEFB118Q96PH6 123 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 FTOQ9C0B1 505 aaKnown RBP eCLIP18.78■□□□□ 0.6
SUMO1-208ENST00000409627 BCAS3Q9H6U6 928 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 SPC25Q9HBM1 224 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 SLC9A2Q9UBY0 812 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 CLIC4Q9Y696 253 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 MORC2Q9Y6X9 1032 aaPredicted RBP18.78■□□□□ 0.6
SUMO1-208ENST00000409627 WDR81Q562E7 1941 aa18.78■□□□□ 0.6
SUMO1-208ENST00000409627 POTEFA5A3E0 1075 aa18.77■□□□□ 0.6
SUMO1-208ENST00000409627 DYNC1LI2O43237 492 aaPredicted RBP18.77■□□□□ 0.6
SUMO1-208ENST00000409627 ADAMTS4O75173 837 aa18.77■□□□□ 0.6
SUMO1-208ENST00000409627 NASPP49321 788 aaPredicted RBP18.77■□□□□ 0.6
SUMO1-208ENST00000409627 KRT76Q01546 638 aa18.77■□□□□ 0.6
SUMO1-208ENST00000409627 PTPAQ15257 358 aa18.77■□□□□ 0.6
SUMO1-208ENST00000409627 PPTC7Q8NI37 304 aa18.77■□□□□ 0.6
SUMO1-208ENST00000409627 GJA10Q969M2 543 aa18.77■□□□□ 0.6
SUMO1-208ENST00000409627 SPATA33Q96N06 139 aa18.77■□□□□ 0.6
SUMO1-208ENST00000409627 UIMC1Q96RL1 719 aa18.77■□□□□ 0.6
SUMO1-208ENST00000409627 TCEAL9Q9UHQ7 104 aa18.77■□□□□ 0.6
SUMO1-208ENST00000409627 VAV3Q9UKW4 847 aa18.77■□□□□ 0.6
SUMO1-208ENST00000409627 A6NJR5 290 aa18.76■□□□□ 0.59
SUMO1-208ENST00000409627 DDX39AO00148 427 aaKnown RBP18.76■□□□□ 0.59
SUMO1-208ENST00000409627 CTAGE5O15320 804 aa18.76■□□□□ 0.59
SUMO1-208ENST00000409627 SORBS3O60504 671 aa18.76■□□□□ 0.59
SUMO1-208ENST00000409627 PGK1P00558 417 aa18.76■□□□□ 0.59
SUMO1-208ENST00000409627 CST5P28325 142 aaPredicted RBP18.76■□□□□ 0.59
SUMO1-208ENST00000409627 CPT1AP50416 773 aa18.76■□□□□ 0.59
SUMO1-208ENST00000409627 DNM1Q05193 864 aaKnown RBP18.76■□□□□ 0.59
SUMO1-208ENST00000409627 PPP2R5CQ13362 524 aa18.76■□□□□ 0.59
SUMO1-208ENST00000409627 HSDL1Q3SXM5 330 aa18.76■□□□□ 0.59
SUMO1-208ENST00000409627 FOXD4L6Q3SYB3 417 aaPredicted RBP18.76■□□□□ 0.59
SUMO1-208ENST00000409627 ARL6IP4Q66PJ3 421 aaKnown RBP18.76■□□□□ 0.59
SUMO1-208ENST00000409627 ZNF746Q6NUN9 644 aaPredicted RBP18.76■□□□□ 0.59
SUMO1-208ENST00000409627 B3GNT9Q6UX72 402 aa18.76■□□□□ 0.59
SUMO1-208ENST00000409627 FOXD4L3Q6VB84 417 aaPredicted RBP18.76■□□□□ 0.59
SUMO1-208ENST00000409627 CRISPLD2Q9H0B8 497 aa18.76■□□□□ 0.59
SUMO1-208ENST00000409627 TTC12Q9H892 705 aaPredicted RBP18.76■□□□□ 0.59
SUMO1-208ENST00000409627 CFAP45Q9UL16 551 aa18.76■□□□□ 0.59
SUMO1-208ENST00000409627 OGDHLQ9ULD0 1010 aa18.76■□□□□ 0.59
SUMO1-208ENST00000409627 ELP1O95163 1332 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 NOP56O00567 594 aaKnown RBP18.75■□□□□ 0.59
SUMO1-208ENST00000409627 SGPL1O95470 568 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 YEATS4O95619 227 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 CCNE2O96020 404 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 MMP3P08254 477 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 C6orf222P0C671 652 aaPredicted RBP18.75■□□□□ 0.59
SUMO1-208ENST00000409627 HOXD8P13378 290 aaPredicted RBP18.75■□□□□ 0.59
SUMO1-208ENST00000409627 CAPN2P17655 700 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 TXKP42681 527 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 KRT85P78386 507 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 SLC39A14Q15043 492 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 FSCN1Q16658 493 aaKnown RBP18.75■□□□□ 0.59
SUMO1-208ENST00000409627 BRDTQ58F21 947 aaPredicted RBP18.75■□□□□ 0.59
SUMO1-208ENST00000409627 RNF180Q86T96 592 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 SMAP1Q8IYB5 467 aaPredicted RBP18.75■□□□□ 0.59
SUMO1-208ENST00000409627 KLHDC9Q8NEP7 349 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 U2AF1L4Q8WU68 220 aaKnown RBP18.75■□□□□ 0.59
SUMO1-208ENST00000409627 AFG1LQ8WV93 481 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 GPR20Q99678 358 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 TMEM106CQ9BVX2 250 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 UNC45AQ9H3U1 944 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 PCDHA12Q9UN75 941 aa18.75■□□□□ 0.59
SUMO1-208ENST00000409627 MYADML2A6NDP7 307 aa18.74■□□□□ 0.59
SUMO1-208ENST00000409627 SFNP31947 248 aa18.74■□□□□ 0.59
SUMO1-208ENST00000409627 GJA8P48165 433 aa18.74■□□□□ 0.59
SUMO1-208ENST00000409627 FXR2P51116 673 aaKnown RBP eCLIP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms