RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CR1LQ2VPA4 569 aa6.18□□□□□ -1.42
PMS1-203ENST00000409593 VWA3BQ502W6 1294 aa6.18□□□□□ -1.42
PMS1-203ENST00000409593 UHMK1Q8TAS1 419 aaKnown RBP6.18□□□□□ -1.42
PMS1-203ENST00000409593 SH3TC2Q8TF17 1288 aa6.18□□□□□ -1.42
PMS1-203ENST00000409593 ZNF526Q8TF50 670 aaPredicted RBP6.18□□□□□ -1.42
PMS1-203ENST00000409593 PIF1Q9H611 641 aa6.18□□□□□ -1.42
PMS1-203ENST00000409593 NGRNQ9NPE2 291 aaKnown RBP6.18□□□□□ -1.42
PMS1-203ENST00000409593 CATSPERZQ9NTU4 200 aa6.18□□□□□ -1.42
PMS1-203ENST00000409593 USP35Q9P2H5 1018 aa6.18□□□□□ -1.42
PMS1-203ENST00000409593 NUB1Q9Y5A7 615 aa6.18□□□□□ -1.42
PMS1-203ENST00000409593 A0A1B0GTL3 188 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 SMARCA5O60264 1052 aaPredicted RBP6.17□□□□□ -1.42
PMS1-203ENST00000409593 TRIM13O60858 407 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 EFCAB14O75071 495 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 PYGMP11217 842 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 ST5P78524 1137 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 TUSC3Q13454 348 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 TEPPQ6URK8 271 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 SAPCD2Q86UD0 394 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 TRIM48Q8IWZ4 208 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 FBXW5Q969U6 566 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 C11orf84Q9BUA3 381 aaPredicted RBP6.17□□□□□ -1.42
PMS1-203ENST00000409593 ZCCHC4Q9H5U6 513 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 CCDC163A0A0D9SF12 145 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 ARVCFO00192 962 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 RASGRP1O95267 797 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 ITGA1P56199 1179 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 BRAPQ7Z569 592 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 PCDH19Q8TAB3 1148 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 SLC7A14Q8TBB6 771 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 ZSWIM3Q96MP5 696 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 CD244Q9BZW8 370 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 KANSL2Q9H9L4 492 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 PCDH18Q9HCL0 1135 aa6.17□□□□□ -1.42
PMS1-203ENST00000409593 INHBBP09529 407 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 KRT15P19012 456 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 DNM2P50570 870 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 CAP1Q01518 475 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 FBLN7Q53RD9 439 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 FAM47CQ5HY64 1035 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 TTLL7Q6ZT98 887 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 KCTD1Q719H9 257 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.16□□□□□ -1.42
PMS1-203ENST00000409593 SP8Q8IXZ3 490 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 KYQ8NBH2 561 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 TP53I13Q8NBR0 393 aaPredicted RBP6.16□□□□□ -1.42
PMS1-203ENST00000409593 CLEC4DQ8WXI8 215 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 MAGEB10Q96LZ2 347 aaPredicted RBP6.16□□□□□ -1.42
PMS1-203ENST00000409593 MRPL4Q9BYD3 311 aaKnown RBP6.16□□□□□ -1.42
PMS1-203ENST00000409593 NCOA5Q9HCD5 579 aaKnown RBP6.16□□□□□ -1.42
PMS1-203ENST00000409593 NTMQ9P121 344 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 ADAMTS20P59510 1910 aa6.16□□□□□ -1.42
PMS1-203ENST00000409593 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.15□□□□□ -1.42
PMS1-203ENST00000409593 CCDC66A2RUB6 948 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 SASH1O94885 1247 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 LRG1P02750 347 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 SQSTM1Q13501 440 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 TRIM61Q5EBN2 209 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 HABP4Q5JVS0 413 aaKnown RBP6.15□□□□□ -1.42
PMS1-203ENST00000409593 TMC5Q6UXY8 1006 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 LIPIQ6XZB0 460 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 EP400NLQ6ZTU2 488 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 CISD2Q8N5K1 135 aaKnown RBP6.15□□□□□ -1.42
PMS1-203ENST00000409593 LINC00482Q8N8I6 264 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 MARCH10Q8NA82 808 aaPredicted RBP6.15□□□□□ -1.42
PMS1-203ENST00000409593 SYT8Q8NBV8 401 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 GSTCDQ8NEC7 633 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 SPATA25Q9BR10 227 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 TELO2Q9Y4R8 837 aa6.15□□□□□ -1.42
PMS1-203ENST00000409593 GSTA4O15217 222 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 RAPGEF3O95398 923 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 PDE6AP16499 860 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 DLX2Q07687 328 aaPredicted RBP6.14□□□□□ -1.43
PMS1-203ENST00000409593 CRY1Q16526 586 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 PAN2Q504Q3 1202 aaKnown RBP6.14□□□□□ -1.43
PMS1-203ENST00000409593 LCE4AQ5TA78 99 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 ARHGAP36Q6ZRI8 547 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 TTLL11Q8NHH1 800 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 SPATA6Q9NWH7 488 aaPredicted RBP6.14□□□□□ -1.43
PMS1-203ENST00000409593 RBPJLQ9UBG7 517 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 CBLCQ9ULV8 474 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 COQ6Q9Y2Z9 468 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 TCRBV5S4A2TA0A5A2 114 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 SH3D21A4FU49 640 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 WNT9AO14904 365 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 THBS2P35442 1172 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 SLURP1P55000 103 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 ADAM9Q13443 819 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 GPR19Q15760 415 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 C16orf59Q7L2K0 433 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 FGD2Q7Z6J4 655 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 PTRH1Q86Y79 214 aaKnown RBP6.14□□□□□ -1.43
PMS1-203ENST00000409593 CARFQ8N187 725 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 TTLL6Q8N841 843 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 FEZF2Q8TBJ5 459 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 SH3RF2Q8TEC5 729 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 KCNC2Q96PR1 638 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 PARD6AQ9NPB6 346 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 SRPK3Q9UPE1 567 aa6.14□□□□□ -1.43
PMS1-203ENST00000409593 ESYT3A0FGR9 886 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms